RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 CCDC93Q567U6 631 aa28.11■■■□□ 2.09
CIRBP-205ENST00000585913 DBF4Q9UBU7 674 aaPredicted RBP28.11■■■□□ 2.09
CIRBP-205ENST00000585913 DICER1Q9UPY3 1922 aaKnown RBP28.1■■■□□ 2.09
CIRBP-205ENST00000585913 CRY2Q49AN0 593 aa28.09■■■□□ 2.09
CIRBP-205ENST00000585913 RPGRQ92834 1020 aaKnown RBP28.09■■■□□ 2.09
CIRBP-205ENST00000585913 TOMM70O94826 608 aa28.08■■■□□ 2.09
CIRBP-205ENST00000585913 C16orf71Q8IYS4 520 aaPredicted RBP28.08■■■□□ 2.09
CIRBP-205ENST00000585913 C7orf43Q8WVR3 580 aa28.08■■■□□ 2.09
CIRBP-205ENST00000585913 UTP14AQ9BVJ6 771 aaKnown RBP28.08■■■□□ 2.09
CIRBP-205ENST00000585913 GLTPD2A6NH11 291 aa28.06■■■□□ 2.08
CIRBP-205ENST00000585913 TCIRG1Q13488 830 aa28.06■■■□□ 2.08
CIRBP-205ENST00000585913 RRAGCQ9HB90 399 aa28.06■■■□□ 2.08
CIRBP-205ENST00000585913 HYPKQ9NX55 129 aa28.06■■■□□ 2.08
CIRBP-205ENST00000585913 RNF123Q5XPI4 1314 aa28.05■■■□□ 2.08
CIRBP-205ENST00000585913 ELL2O00472 640 aaPredicted RBP28.04■■■□□ 2.08
CIRBP-205ENST00000585913 CCDC27Q2M243 656 aa28.04■■■□□ 2.08
CIRBP-205ENST00000585913 NLRP10Q86W26 655 aa28.04■■■□□ 2.08
CIRBP-205ENST00000585913 PLBD2Q8NHP8 589 aa28.04■■■□□ 2.08
CIRBP-205ENST00000585913 NLRP3Q96P20 1036 aa28.04■■■□□ 2.08
CIRBP-205ENST00000585913 FKBP4Q02790 459 aaKnown RBP eCLIP28.03■■■□□ 2.08
CIRBP-205ENST00000585913 DPY19L2Q6NUT2 758 aa28.03■■■□□ 2.08
CIRBP-205ENST00000585913 ANKRD13DQ6ZTN6 518 aa28.03■■■□□ 2.08
CIRBP-205ENST00000585913 RTKN2Q8IZC4 609 aa28.03■■■□□ 2.08
CIRBP-205ENST00000585913 RBM17Q96I25 401 aaKnown RBP28.03■■■□□ 2.08
CIRBP-205ENST00000585913 HOXA10P31260 410 aaPredicted RBP28.02■■■□□ 2.08
CIRBP-205ENST00000585913 OLFM4Q6UX06 510 aa28.02■■■□□ 2.08
CIRBP-205ENST00000585913 SLC10A5Q5PT55 438 aa28.01■■■□□ 2.07
CIRBP-205ENST00000585913 C3orf67Q6ZVT6 689 aa28■■■□□ 2.07
CIRBP-205ENST00000585913 WWC1Q8IX03 1113 aa28■■■□□ 2.07
CIRBP-205ENST00000585913 C8orf58Q8NAV2 365 aa28■■■□□ 2.07
CIRBP-205ENST00000585913 RBM46Q8TBY0 533 aaKnown RBP28■■■□□ 2.07
CIRBP-205ENST00000585913 CRAMP1Q96RY5 1269 aa28■■■□□ 2.07
CIRBP-205ENST00000585913 TRMT112Q9UI30 125 aaKnown RBP28■■■□□ 2.07
CIRBP-205ENST00000585913 CHMP4AQ9BY43 222 aa27.99■■■□□ 2.07
CIRBP-205ENST00000585913 SH3TC1Q8TE82 1336 aa27.98■■■□□ 2.07
CIRBP-205ENST00000585913 CC2D2BQ6DHV5 1058 aa27.98■■■□□ 2.07
CIRBP-205ENST00000585913 LAMB2P55268 1798 aa27.97■■■□□ 2.07
CIRBP-205ENST00000585913 VEGFAP15692 232 aaPredicted RBP27.97■■■□□ 2.07
CIRBP-205ENST00000585913 GOLGA2Q08379 1002 aa27.97■■■□□ 2.07
CIRBP-205ENST00000585913 NCBP3Q53F19 620 aaKnown RBP27.97■■■□□ 2.07
CIRBP-205ENST00000585913 TSR2Q969E8 191 aaKnown RBP27.97■■■□□ 2.07
CIRBP-205ENST00000585913 ZNF277Q9NRM2 450 aaPredicted RBP27.97■■■□□ 2.07
CIRBP-205ENST00000585913 WDR90Q96KV7 1748 aa27.96■■■□□ 2.07
CIRBP-205ENST00000585913 PPEF1O14829 653 aaPredicted RBP27.96■■■□□ 2.07
CIRBP-205ENST00000585913 HCLS1P14317 486 aaPredicted RBP27.96■■■□□ 2.07
CIRBP-205ENST00000585913 CCDC30Q5VVM6 783 aa27.96■■■□□ 2.07
CIRBP-205ENST00000585913 RIC3Q7Z5B4 369 aa27.95■■■□□ 2.06
CIRBP-205ENST00000585913 SYNE4Q8N205 404 aa27.95■■■□□ 2.06
CIRBP-205ENST00000585913 ISCA1Q9BUE6 129 aa27.95■■■□□ 2.06
CIRBP-205ENST00000585913 PHAXQ9H814 394 aaKnown RBP27.95■■■□□ 2.06
CIRBP-205ENST00000585913 IL16Q14005 1332 aa27.94■■■□□ 2.06
CIRBP-205ENST00000585913 SNED1Q8TER0 1413 aa27.94■■■□□ 2.06
CIRBP-205ENST00000585913 ATP5J2-PTCD1G3V325 749 aa27.94■■■□□ 2.06
CIRBP-205ENST00000585913 TSPYL6Q8N831 410 aa27.94■■■□□ 2.06
CIRBP-205ENST00000585913 ZNF428Q96B54 188 aa27.94■■■□□ 2.06
CIRBP-205ENST00000585913 TCERG1O14776 1098 aaKnown RBP27.93■■■□□ 2.06
CIRBP-205ENST00000585913 IARSP41252 1262 aaKnown RBP27.93■■■□□ 2.06
CIRBP-205ENST00000585913 FSTL1Q12841 308 aa27.93■■■□□ 2.06
CIRBP-205ENST00000585913 GRIPAP1Q4V328 841 aa27.93■■■□□ 2.06
CIRBP-205ENST00000585913 PSMD1Q99460 953 aa27.93■■■□□ 2.06
CIRBP-205ENST00000585913 TMX4Q9H1E5 349 aaPredicted RBP27.93■■■□□ 2.06
CIRBP-205ENST00000585913 SALL2Q9Y467 1007 aaPredicted RBP27.92■■■□□ 2.06
CIRBP-205ENST00000585913 ABCC4O15439 1325 aa27.92■■■□□ 2.06
CIRBP-205ENST00000585913 DNAJC5GQ8N7S2 189 aa27.91■■■□□ 2.06
CIRBP-205ENST00000585913 DDX60Q8IY21 1712 aaKnown RBP27.91■■■□□ 2.06
CIRBP-205ENST00000585913 DDNO94850 711 aaPredicted RBP27.9■■■□□ 2.06
CIRBP-205ENST00000585913 APLP1P51693 650 aa27.9■■■□□ 2.06
CIRBP-205ENST00000585913 DDX46Q7L014 1031 aaKnown RBP27.9■■■□□ 2.06
CIRBP-205ENST00000585913 FAM9BQ8IZU0 186 aa27.9■■■□□ 2.06
CIRBP-205ENST00000585913 SMC1BQ8NDV3 1235 aa27.9■■■□□ 2.06
CIRBP-205ENST00000585913 DDX58O95786 925 aaKnown RBP27.89■■■□□ 2.06
CIRBP-205ENST00000585913 TRIM28Q13263 835 aaKnown RBP27.89■■■□□ 2.06
CIRBP-205ENST00000585913 FAM89AQ96GI7 184 aa27.89■■■□□ 2.06
CIRBP-205ENST00000585913 STK31Q9BXU1 1019 aa27.89■■■□□ 2.06
CIRBP-205ENST00000585913 POTECB2RU33 542 aa27.88■■■□□ 2.05
CIRBP-205ENST00000585913 TWISTNBQ3B726 338 aaPredicted RBP27.88■■■□□ 2.05
CIRBP-205ENST00000585913 ATP6V0A2Q9Y487 856 aa27.88■■■□□ 2.05
CIRBP-205ENST00000585913 WDR63Q8IWG1 891 aa27.87■■■□□ 2.05
CIRBP-205ENST00000585913 JDP2Q8WYK2 163 aa27.87■■■□□ 2.05
CIRBP-205ENST00000585913 MYD88Q99836 296 aa27.87■■■□□ 2.05
CIRBP-205ENST00000585913 BBOX1O75936 387 aa27.86■■■□□ 2.05
CIRBP-205ENST00000585913 SLC51AQ86UW1 340 aa27.86■■■□□ 2.05
CIRBP-205ENST00000585913 GRAPQ13588 217 aa27.85■■■□□ 2.05
CIRBP-205ENST00000585913 RTL5Q5HYW3 569 aaPredicted RBP27.85■■■□□ 2.05
CIRBP-205ENST00000585913 GRAPLQ8TC17 118 aaPredicted RBP27.85■■■□□ 2.05
CIRBP-205ENST00000585913 ZNF541Q9H0D2 1346 aa27.85■■■□□ 2.05
CIRBP-205ENST00000585913 FANCIQ9NVI1 1328 aa27.85■■■□□ 2.05
CIRBP-205ENST00000585913 IQCA1LA6NCM1 817 aa27.83■■■□□ 2.05
CIRBP-205ENST00000585913 FZD9O00144 591 aa27.83■■■□□ 2.05
CIRBP-205ENST00000585913 IRS4O14654 1257 aaPredicted RBP27.83■■■□□ 2.05
CIRBP-205ENST00000585913 LARGE2Q8N3Y3 721 aa27.83■■■□□ 2.05
CIRBP-205ENST00000585913 ZBTB38Q8NAP3 1195 aaPredicted RBP27.83■■■□□ 2.05
CIRBP-205ENST00000585913 SP8Q8IXZ3 490 aa27.82■■■□□ 2.04
CIRBP-205ENST00000585913 CCDC191Q8NCU4 936 aa27.82■■■□□ 2.04
CIRBP-205ENST00000585913 L3MBTL3Q96JM7 780 aaPredicted RBP27.82■■■□□ 2.04
CIRBP-205ENST00000585913 METTL22Q9BUU2 404 aaPredicted RBP27.82■■■□□ 2.04
CIRBP-205ENST00000585913 SCN4AP35499 1836 aa27.82■■■□□ 2.04
CIRBP-205ENST00000585913 TAF1P21675 1872 aa27.81■■■□□ 2.04
CIRBP-205ENST00000585913 HSP90B1P14625 803 aaKnown RBP27.81■■■□□ 2.04
CIRBP-205ENST00000585913 SF3B3Q15393 1217 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms