RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ANTXR1Q9H6X2 564 aa14.9□□□□□ -0.02
SMARCA4-208ENST00000585799 IDH1O75874 414 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-208ENST00000585799 DDX11Q96FC9 970 aa14.9□□□□□ -0.02
SMARCA4-208ENST00000585799 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-208ENST00000585799 LMTK3Q96Q04 1460 aa14.9□□□□□ -0.02
SMARCA4-208ENST00000585799 RGPD8O14715 1765 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-208ENST00000585799 DDB1Q16531 1140 aa14.89□□□□□ -0.03
SMARCA4-208ENST00000585799 MPHOSPH8Q99549 860 aa14.89□□□□□ -0.03
SMARCA4-208ENST00000585799 SGSM2O43147 1006 aa14.89□□□□□ -0.03
SMARCA4-208ENST00000585799 C8orf37Q96NL8 207 aa14.89□□□□□ -0.03
SMARCA4-208ENST00000585799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMARCA4-208ENST00000585799 ANKRD26Q9UPS8 1709 aa14.89□□□□□ -0.03
SMARCA4-208ENST00000585799 CEBPZQ03701 1054 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-208ENST00000585799 RBM27Q9P2N5 1060 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-208ENST00000585799 CEMIPQ8WUJ3 1361 aa14.88□□□□□ -0.03
SMARCA4-208ENST00000585799 HAND2P61296 217 aa14.88□□□□□ -0.03
SMARCA4-208ENST00000585799 TTC41PQ6P2S7 1318 aa14.88□□□□□ -0.03
SMARCA4-208ENST00000585799 PXDNQ92626 1479 aa14.88□□□□□ -0.03
SMARCA4-208ENST00000585799 SASH1O94885 1247 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 PTH1RQ03431 593 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 RAB3GAP1Q15042 981 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 OSBPL3Q9H4L5 887 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 RGS12O14924 1447 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 POLA2Q14181 598 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 VPS37DQ86XT2 251 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 KIF2CQ99661 725 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 UBAP1LF5GYI3 381 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 AK2P54819 239 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 GNL2Q13823 731 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 CARD10Q9BWT7 1032 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 FPGT-TNNI3KV9GXZ4 949 aa14.87□□□□□ -0.03
SMARCA4-208ENST00000585799 LARP1BQ659C4 914 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 MPNDQ8N594 471 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 SYAP1Q96A49 352 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 RAB11FIP4Q86YS3 637 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 PANK2Q9BZ23 570 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 KCNQ4P56696 695 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 IQSEC3Q9UPP2 1182 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 SNX14Q9Y5W7 946 aa14.86□□□□□ -0.03
SMARCA4-208ENST00000585799 MON2Q7Z3U7 1717 aa14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 LRRC24Q50LG9 513 aa14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 RALYLQ86SE5 291 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 DZIP3Q86Y13 1208 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 SEC62Q99442 399 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 ERVV-2B6SEH9 535 aa14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 PUS3Q9BZE2 481 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 HCLS1P14317 486 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 LRRFIP1Q32MZ4 808 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 ATP6V1DQ9Y5K8 247 aa14.85□□□□□ -0.03
SMARCA4-208ENST00000585799 WDR33Q9C0J8 1336 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 PEAK1Q9H792 1746 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 RRP12Q5JTH9 1297 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 PI4K2BQ8TCG2 481 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 NAP1L5Q96NT1 182 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 TEX13AQ9BXU3 409 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 GRPEL1Q9HAV7 217 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 NBPF26B4DH59 902 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 MRE11P49959 708 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 NBPF14Q5TI25 921 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 NBPF10Q6P3W6 841 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 CHST3Q7LGC8 479 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 SYNE4Q8N205 404 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 NBPF15Q8N660 670 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 PIGBQ92521 554 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 A0A0D9SFI3 127 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 ANKRD18BA2A2Z9 1011 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 CPLX1O14810 134 aa14.84□□□□□ -0.03
SMARCA4-208ENST00000585799 TRDNQ13061 729 aa14.83□□□□□ -0.03
SMARCA4-208ENST00000585799 CREB3L3Q68CJ9 461 aa14.83□□□□□ -0.03
SMARCA4-208ENST00000585799 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 IL25Q9H293 177 aa14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 A0A1B0GUL7 405 aa14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 SYCE3A1L190 88 aa14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 NASPP49321 788 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 ANAPC15P60006 121 aa14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 CCT2P78371 535 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 PDIA6Q15084 440 aa14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 ZRSR1Q15695 479 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 DBNLQ9UJU6 430 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 CCDC171Q6TFL3 1326 aa14.83□□□□□ -0.04
SMARCA4-208ENST00000585799 IRS4O14654 1257 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 GJB2P29033 226 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 SLFNL1Q499Z3 407 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 FAM182BQ5T319 152 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 ABCF2Q9UG63 623 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 GUCY1B3Q02153 619 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 CCDC24Q8N4L8 307 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 RAD50Q92878 1312 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 SETD1AO15047 1707 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 EYA2O00167 538 aa14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 FAM98CQ17RN3 349 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-208ENST00000585799 BICD2Q8TD16 824 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms