RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 DDX21Q9NR30 783 aaKnown RBP eCLIP12.37□□□□□ -0.43
SDF2-203ENST00000585749 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
SDF2-203ENST00000585749 U2SURPO15042 1029 aaKnown RBP12.36□□□□□ -0.43
SDF2-203ENST00000585749 FKBP4Q02790 459 aaKnown RBP eCLIP12.36□□□□□ -0.43
SDF2-203ENST00000585749 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
SDF2-203ENST00000585749 BEGAINQ9BUH8 593 aa12.36□□□□□ -0.43
SDF2-203ENST00000585749 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
SDF2-203ENST00000585749 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
SDF2-203ENST00000585749 TBC1D2BQ9UPU7 963 aa12.36□□□□□ -0.43
SDF2-203ENST00000585749 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
SDF2-203ENST00000585749 FZD9O00144 591 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 STARD3NLO95772 234 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 ST5P78524 1137 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 FMR1Q06787 632 aaKnown RBP eCLIP12.35□□□□□ -0.431e-9■■■■■ 61.1
SDF2-203ENST00000585749 CYP4F22Q6NT55 531 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 KIF12Q96FN5 646 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 GPR101Q96P66 508 aaPredicted RBP12.35□□□□□ -0.43
SDF2-203ENST00000585749 MCOLN1Q9GZU1 580 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 NUDCQ9Y266 331 aa12.35□□□□□ -0.43
SDF2-203ENST00000585749 ECE1P42892 770 aa12.34□□□□□ -0.43
SDF2-203ENST00000585749 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
SDF2-203ENST00000585749 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
SDF2-203ENST00000585749 SETDB2Q96T68 719 aa12.34□□□□□ -0.43
SDF2-203ENST00000585749 CASP8AP2Q9UKL3 1982 aa12.34□□□□□ -0.43
SDF2-203ENST00000585749 NPHP1O15259 732 aa12.33□□□□□ -0.44
SDF2-203ENST00000585749 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
SDF2-203ENST00000585749 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
SDF2-203ENST00000585749 GRM1Q13255 1194 aa12.33□□□□□ -0.44
SDF2-203ENST00000585749 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
SDF2-203ENST00000585749 GPC2Q8N158 579 aa12.33□□□□□ -0.44
SDF2-203ENST00000585749 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
SDF2-203ENST00000585749 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
SDF2-203ENST00000585749 COL4A5P29400 1685 aa12.32□□□□□ -0.44
SDF2-203ENST00000585749 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
SDF2-203ENST00000585749 IARSP41252 1262 aaKnown RBP12.32□□□□□ -0.44
SDF2-203ENST00000585749 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
SDF2-203ENST00000585749 RALBP1Q15311 655 aa12.32□□□□□ -0.44
SDF2-203ENST00000585749 CST9Q5W186 159 aa12.32□□□□□ -0.44
SDF2-203ENST00000585749 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
SDF2-203ENST00000585749 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
SDF2-203ENST00000585749 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 SIPA1L3O60292 1781 aaPredicted RBP12.31□□□□□ -0.44
SDF2-203ENST00000585749 KLRG2A4D1S0 409 aaPredicted RBP12.31□□□□□ -0.44
SDF2-203ENST00000585749 MAP3K13O43283 966 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 AOC2O75106 756 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 NPR1P16066 1061 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 MAP2K2P36507 400 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 TTC5Q8N0Z6 440 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
SDF2-203ENST00000585749 TLL2Q9Y6L7 1015 aa12.31□□□□□ -0.44
SDF2-203ENST00000585749 U2AF1L5P0DN76 240 aaPredicted RBP12.3□□□□□ -0.44
SDF2-203ENST00000585749 PRKAR2BP31323 418 aa12.3□□□□□ -0.44
SDF2-203ENST00000585749 U2AF1Q01081 240 aaKnown RBP eCLIP12.3□□□□□ -0.44
SDF2-203ENST00000585749 SYNE4Q8N205 404 aa12.3□□□□□ -0.44
SDF2-203ENST00000585749 TRAF5O00463 557 aa12.29□□□□□ -0.44
SDF2-203ENST00000585749 CA12O43570 354 aa12.29□□□□□ -0.44
SDF2-203ENST00000585749 A1BGP04217 495 aa12.29□□□□□ -0.44
SDF2-203ENST00000585749 SCNN1DP51172 638 aa12.29□□□□□ -0.44
SDF2-203ENST00000585749 DGKZQ13574 1117 aa12.29□□□□□ -0.44
SDF2-203ENST00000585749 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
SDF2-203ENST00000585749 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
SDF2-203ENST00000585749 GNAT3A8MTJ3 354 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
SDF2-203ENST00000585749 EPS15P42566 896 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
SDF2-203ENST00000585749 GSE1Q14687 1217 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 ZNF790Q6PG37 636 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 DZIP3Q86Y13 1208 aaKnown RBP12.28□□□□□ -0.44
SDF2-203ENST00000585749 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 PSMD1Q99460 953 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 GJA3Q9Y6H8 435 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 MYBBP1AQ9BQG0 1328 aaKnown RBP12.28□□□□□ -0.44
SDF2-203ENST00000585749 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
SDF2-203ENST00000585749 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.45
SDF2-203ENST00000585749 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
SDF2-203ENST00000585749 JDP2Q8WYK2 163 aa12.27□□□□□ -0.45
SDF2-203ENST00000585749 PYGBP11216 843 aa12.26□□□□□ -0.45
SDF2-203ENST00000585749 CLEC4GQ6UXB4 293 aa12.26□□□□□ -0.45
SDF2-203ENST00000585749 USP50Q70EL3 339 aaPredicted RBP12.26□□□□□ -0.45
SDF2-203ENST00000585749 NPM2Q86SE8 214 aaKnown RBP12.26□□□□□ -0.45
SDF2-203ENST00000585749 ALDH1B1P30837 517 aa12.25□□□□□ -0.45
SDF2-203ENST00000585749 IL17REQ8NFR9 667 aa12.25□□□□□ -0.45
SDF2-203ENST00000585749 HHIPL1Q96JK4 782 aa12.25□□□□□ -0.45
SDF2-203ENST00000585749 DCBLD2Q96PD2 775 aa12.25□□□□□ -0.45
SDF2-203ENST00000585749 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
SDF2-203ENST00000585749 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
SDF2-203ENST00000585749 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
SDF2-203ENST00000585749 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
SDF2-203ENST00000585749 PIP4K2AP48426 406 aaPredicted RBP12.24□□□□□ -0.45
SDF2-203ENST00000585749 TEFQ10587 303 aa12.24□□□□□ -0.45
SDF2-203ENST00000585749 PRPF38BQ5VTL8 546 aaKnown RBP12.24□□□□□ -0.45
SDF2-203ENST00000585749 CIAPIN1Q6FI81 312 aa12.24□□□□□ -0.45
SDF2-203ENST00000585749 TPTE2Q6XPS3 522 aa12.24□□□□□ -0.45
SDF2-203ENST00000585749 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
SDF2-203ENST00000585749 NEFMP07197 916 aa12.23□□□□□ -0.45
SDF2-203ENST00000585749 SOX10P56693 466 aa12.23□□□□□ -0.45
SDF2-203ENST00000585749 PLEKHF1Q96S99 279 aa12.23□□□□□ -0.45
SDF2-203ENST00000585749 PNNQ9H307 717 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms