RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 COL23A1Q86Y22 540 aaPredicted RBP28.2■■■□□ 2.1
LAMA3-204ENST00000585600 CWC25Q9NXE8 425 aaPredicted RBP28.2■■■□□ 2.1
LAMA3-204ENST00000585600 PCDHB15Q9Y5E8 787 aa28.2■■■□□ 2.1
LAMA3-204ENST00000585600 UBN2Q6ZU65 1347 aa28.19■■■□□ 2.1
LAMA3-204ENST00000585600 GRM8O00222 908 aa28.19■■■□□ 2.1
LAMA3-204ENST00000585600 IGHDP01880 384 aa28.19■■■□□ 2.1
LAMA3-204ENST00000585600 NLRP10Q86W26 655 aa28.19■■■□□ 2.1
LAMA3-204ENST00000585600 SKAP1Q86WV1 359 aa28.19■■■□□ 2.1
LAMA3-204ENST00000585600 C9orf78Q9NZ63 289 aaPredicted RBP28.19■■■□□ 2.1
LAMA3-204ENST00000585600 ZNF652Q9Y2D9 606 aa28.19■■■□□ 2.1
LAMA3-204ENST00000585600 UTYO14607 1347 aa28.19■■■□□ 2.1
LAMA3-204ENST00000585600 GNAI3P08754 354 aa28.18■■■□□ 2.1
LAMA3-204ENST00000585600 STK32BQ9NY57 414 aa28.18■■■□□ 2.1
LAMA3-204ENST00000585600 PNPLA7Q6ZV29 1317 aa28.18■■■□□ 2.1
LAMA3-204ENST00000585600 JARID2Q92833 1246 aaPredicted RBP28.18■■■□□ 2.1
LAMA3-204ENST00000585600 ZBTB47Q9UFB7 747 aaPredicted RBP28.17■■■□□ 2.1
LAMA3-204ENST00000585600 UBTFL1P0CB47 393 aaPredicted RBP28.16■■■□□ 2.1
LAMA3-204ENST00000585600 TBC1D9BQ66K14 1250 aa28.16■■■□□ 2.1
LAMA3-204ENST00000585600 NIP7Q9Y221 180 aaKnown RBP eCLIP28.16■■■□□ 2.1
LAMA3-204ENST00000585600 H7C1W4 665 aa28.15■■■□□ 2.1
LAMA3-204ENST00000585600 GYS1P13807 737 aa28.15■■■□□ 2.1
LAMA3-204ENST00000585600 CASP7P55210 303 aa28.15■■■□□ 2.1
LAMA3-204ENST00000585600 BCORQ6W2J9 1755 aa28.15■■■□□ 2.1
LAMA3-204ENST00000585600 C4AP0C0L4 1744 aa28.15■■■□□ 2.1
LAMA3-204ENST00000585600 FAM161AQ3B820 660 aa28.15■■■□□ 2.1
LAMA3-204ENST00000585600 FLAD1Q8NFF5 587 aa28.15■■■□□ 2.1
LAMA3-204ENST00000585600 SCN7AQ01118 1682 aa28.14■■■□□ 2.09
LAMA3-204ENST00000585600 GNAI2P04899 355 aa28.13■■■□□ 2.09
LAMA3-204ENST00000585600 SUSD4Q5VX71 490 aa28.13■■■□□ 2.09
LAMA3-204ENST00000585600 LRRFIP2Q9Y608 721 aaKnown RBP28.13■■■□□ 2.09
LAMA3-204ENST00000585600 NUP98P52948 1817 aa28.13■■■□□ 2.09
LAMA3-204ENST00000585600 RTL5Q5HYW3 569 aaPredicted RBP28.13■■■□□ 2.09
LAMA3-204ENST00000585600 UBE3BQ7Z3V4 1068 aa28.13■■■□□ 2.09
LAMA3-204ENST00000585600 KAZALD1Q96I82 304 aa28.13■■■□□ 2.09
LAMA3-204ENST00000585600 BICDL1Q6ZP65 573 aa28.12■■■□□ 2.09
LAMA3-204ENST00000585600 SUCLG2Q96I99 432 aa28.12■■■□□ 2.09
LAMA3-204ENST00000585600 PARP10Q53GL7 1025 aa28.11■■■□□ 2.09
LAMA3-204ENST00000585600 SYNE4Q8N205 404 aa28.11■■■□□ 2.09
LAMA3-204ENST00000585600 ZBTB38Q8NAP3 1195 aaPredicted RBP28.11■■■□□ 2.09
LAMA3-204ENST00000585600 FAM89AQ96GI7 184 aa28.11■■■□□ 2.09
LAMA3-204ENST00000585600 PCCAP05165 728 aaPredicted RBP28.1■■■□□ 2.09
LAMA3-204ENST00000585600 SIRT2Q8IXJ6 389 aa28.1■■■□□ 2.09
LAMA3-204ENST00000585600 TUBGCP6Q96RT7 1819 aa28.09■■■□□ 2.09
LAMA3-204ENST00000585600 CEP85Q6P2H3 762 aa28.09■■■□□ 2.09
LAMA3-204ENST00000585600 TRMT112Q9UI30 125 aaKnown RBP28.09■■■□□ 2.09
LAMA3-204ENST00000585600 FAM177BA6PVY3 158 aa28.08■■■□□ 2.09
LAMA3-204ENST00000585600 NFIXQ14938 502 aa28.08■■■□□ 2.09
LAMA3-204ENST00000585600 SETDB2Q96T68 719 aa28.08■■■□□ 2.09
LAMA3-204ENST00000585600 ANKRD36CQ5JPF3 1778 aa28.07■■■□□ 2.08
LAMA3-204ENST00000585600 NTSR2O95665 410 aa28.07■■■□□ 2.08
LAMA3-204ENST00000585600 C8orf34Q49A92 452 aa28.07■■■□□ 2.08
LAMA3-204ENST00000585600 EPHA10Q5JZY3 1008 aa28.07■■■□□ 2.08
LAMA3-204ENST00000585600 UTP14AQ9BVJ6 771 aaKnown RBP28.07■■■□□ 2.08
LAMA3-204ENST00000585600 AFDNP55196 1824 aaKnown RBP28.06■■■□□ 2.08
LAMA3-204ENST00000585600 TM4SF1P30408 202 aa28.06■■■□□ 2.08
LAMA3-204ENST00000585600 PDGFDQ9GZP0 370 aaPredicted RBP28.06■■■□□ 2.08
LAMA3-204ENST00000585600 PPP1R42Q7Z4L9 355 aa28.06■■■□□ 2.08
LAMA3-204ENST00000585600 RPAP2Q8IXW5 612 aaPredicted RBP28.06■■■□□ 2.08
LAMA3-204ENST00000585600 ANKRD44Q8N8A2 993 aa28.06■■■□□ 2.08
LAMA3-204ENST00000585600 RWDD1Q9H446 243 aaPredicted RBP28.06■■■□□ 2.08
LAMA3-204ENST00000585600 RGS3P49796 1198 aa28.05■■■□□ 2.08
LAMA3-204ENST00000585600 BICC1Q9H694 974 aaKnown RBP28.05■■■□□ 2.08
LAMA3-204ENST00000585600 HDAC5Q9UQL6 1122 aa28.04■■■□□ 2.08
LAMA3-204ENST00000585600 CDHR2Q9BYE9 1310 aa28.03■■■□□ 2.08
LAMA3-204ENST00000585600 FOXO4P98177 505 aa28.03■■■□□ 2.08
LAMA3-204ENST00000585600 ATP8B2P98198 1209 aa28.03■■■□□ 2.08
LAMA3-204ENST00000585600 NUTM1Q86Y26 1132 aa28.03■■■□□ 2.08
LAMA3-204ENST00000585600 PNMA6EA0A0J9YXQ4 647 aa28.02■■■□□ 2.08
LAMA3-204ENST00000585600 NLGN1Q8N2Q7 840 aa28.02■■■□□ 2.08
LAMA3-204ENST00000585600 DDRGK1Q96HY6 314 aa28.02■■■□□ 2.08
LAMA3-204ENST00000585600 SH3TC1Q8TE82 1336 aa28.02■■■□□ 2.08
LAMA3-204ENST00000585600 HDAC1Q13547 482 aaPredicted RBP28.02■■■□□ 2.08
LAMA3-204ENST00000585600 IRS4O14654 1257 aaPredicted RBP28.01■■■□□ 2.07
LAMA3-204ENST00000585600 RABL6Q3YEC7 729 aaPredicted RBP28.01■■■□□ 2.07
LAMA3-204ENST00000585600 PLA2G12BQ9BX93 195 aa28.01■■■□□ 2.07
LAMA3-204ENST00000585600 DDR1Q08345 913 aa28■■■□□ 2.07
LAMA3-204ENST00000585600 MTX1Q13505 466 aa28■■■□□ 2.07
LAMA3-204ENST00000585600 CARMIL3Q8ND23 1372 aa28■■■□□ 2.07
LAMA3-204ENST00000585600 ERFEQ4G0M1 354 aa27.99■■■□□ 2.07
LAMA3-204ENST00000585600 NBPF5PQ86XG9 351 aaPredicted RBP27.99■■■□□ 2.07
LAMA3-204ENST00000585600 MSL1Q68DK7 614 aa27.99■■■□□ 2.07
LAMA3-204ENST00000585600 POLRMTO00411 1230 aaKnown RBP27.98■■■□□ 2.07
LAMA3-204ENST00000585600 HCLS1P14317 486 aaPredicted RBP27.98■■■□□ 2.07
LAMA3-204ENST00000585600 TPTE2Q6XPS3 522 aa27.98■■■□□ 2.07
LAMA3-204ENST00000585600 NYXQ9GZU5 481 aa27.98■■■□□ 2.07
LAMA3-204ENST00000585600 QSER1Q2KHR3 1735 aa27.98■■■□□ 2.07
LAMA3-204ENST00000585600 LMBR1LQ6UX01 489 aa27.97■■■□□ 2.07
LAMA3-204ENST00000585600 SRGAP3O43295 1099 aa27.97■■■□□ 2.07
LAMA3-204ENST00000585600 SERPINB2P05120 415 aa27.97■■■□□ 2.07
LAMA3-204ENST00000585600 SSH3Q8TE77 659 aa27.97■■■□□ 2.07
LAMA3-204ENST00000585600 COL24A1Q17RW2 1714 aa27.96■■■□□ 2.07
LAMA3-204ENST00000585600 POLA2Q14181 598 aa27.96■■■□□ 2.07
LAMA3-204ENST00000585600 PDE8AO60658 829 aa27.95■■■□□ 2.07
LAMA3-204ENST00000585600 SLC10A5Q5PT55 438 aa27.95■■■□□ 2.07
LAMA3-204ENST00000585600 CCDC24Q8N4L8 307 aa27.95■■■□□ 2.07
LAMA3-204ENST00000585600 ABCC12Q96J65 1359 aa27.95■■■□□ 2.06
LAMA3-204ENST00000585600 CSF1RP07333 972 aa27.95■■■□□ 2.06
LAMA3-204ENST00000585600 R3HDM1Q15032 1099 aaKnown RBP27.95■■■□□ 2.06
LAMA3-204ENST00000585600 MMP10P09238 476 aa27.94■■■□□ 2.06
LAMA3-204ENST00000585600 GTF2E1P29083 439 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms