RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
ERBB2-222ENST00000584908 NUTM1Q86Y26 1132 aa20.9■□□□□ 0.94
ERBB2-222ENST00000584908 MASTLQ96GX5 879 aa20.9■□□□□ 0.94
ERBB2-222ENST00000584908 CACNA1SQ13698 1873 aa20.9■□□□□ 0.94
ERBB2-222ENST00000584908 SLX4Q8IY92 1834 aa20.89■□□□□ 0.94
ERBB2-222ENST00000584908 SLFN5Q08AF3 891 aa20.89■□□□□ 0.93
ERBB2-222ENST00000584908 SLC10A5Q5PT55 438 aa20.89■□□□□ 0.93
ERBB2-222ENST00000584908 UTP14AQ9BVJ6 771 aaKnown RBP20.89■□□□□ 0.93
ERBB2-222ENST00000584908 LAMB2P55268 1798 aa20.88■□□□□ 0.93
ERBB2-222ENST00000584908 DDX58O95786 925 aaKnown RBP20.88■□□□□ 0.93
ERBB2-222ENST00000584908 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
ERBB2-222ENST00000584908 SBF1O95248 1867 aa20.87■□□□□ 0.93
ERBB2-222ENST00000584908 NPR1P16066 1061 aa20.87■□□□□ 0.93
ERBB2-222ENST00000584908 RIC3Q7Z5B4 369 aa20.87■□□□□ 0.93
ERBB2-222ENST00000584908 TRMT2AQ8IZ69 625 aaKnown RBP20.87■□□□□ 0.93
ERBB2-222ENST00000584908 CNKSR1Q969H4 720 aa20.87■□□□□ 0.93
ERBB2-222ENST00000584908 KSR2Q6VAB6 950 aa20.86■□□□□ 0.93
ERBB2-222ENST00000584908 ZNF622Q969S3 477 aaKnown RBP eCLIP20.86■□□□□ 0.93
ERBB2-222ENST00000584908 DDX60Q8IY21 1712 aaKnown RBP20.86■□□□□ 0.93
ERBB2-222ENST00000584908 FER1L6Q2WGJ9 1857 aa20.86■□□□□ 0.93
ERBB2-222ENST00000584908 ADCY9O60503 1353 aa20.85■□□□□ 0.93
ERBB2-222ENST00000584908 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
ERBB2-222ENST00000584908 G2E3Q7L622 706 aa20.85■□□□□ 0.93
ERBB2-222ENST00000584908 METTL22Q9BUU2 404 aaPredicted RBP20.85■□□□□ 0.93
ERBB2-222ENST00000584908 SH3TC1Q8TE82 1336 aa20.84■□□□□ 0.93
ERBB2-222ENST00000584908 HOXA10P31260 410 aaPredicted RBP20.84■□□□□ 0.93
ERBB2-222ENST00000584908 ARHGAP27Q6ZUM4 889 aa20.84■□□□□ 0.93
ERBB2-222ENST00000584908 TRMT112Q9UI30 125 aaKnown RBP20.84■□□□□ 0.93
ERBB2-222ENST00000584908 PI4KAP2A4QPH2 592 aa20.83■□□□□ 0.93
ERBB2-222ENST00000584908 ATP5J2-PTCD1G3V325 749 aa20.83■□□□□ 0.93
ERBB2-222ENST00000584908 FLIIQ13045 1269 aa20.83■□□□□ 0.93
ERBB2-222ENST00000584908 PRPF40BQ6NWY9 871 aaKnown RBP20.83■□□□□ 0.93
ERBB2-222ENST00000584908 PI4KAP1Q8N8J0 262 aa20.83■□□□□ 0.93
ERBB2-222ENST00000584908 ALDH1B1P30837 517 aa20.82■□□□□ 0.92
ERBB2-222ENST00000584908 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
ERBB2-222ENST00000584908 C7orf43Q8WVR3 580 aa20.82■□□□□ 0.92
ERBB2-222ENST00000584908 CDCA7LQ96GN5 454 aa20.82■□□□□ 0.92
ERBB2-222ENST00000584908 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
ERBB2-222ENST00000584908 C3orf67Q6ZVT6 689 aa20.81■□□□□ 0.92
ERBB2-222ENST00000584908 NLRP3Q96P20 1036 aa20.81■□□□□ 0.92
ERBB2-222ENST00000584908 MYD88Q99836 296 aa20.81■□□□□ 0.92
ERBB2-222ENST00000584908 SYNE4Q8N205 404 aa20.8■□□□□ 0.92
ERBB2-222ENST00000584908 ZNF428Q96B54 188 aa20.8■□□□□ 0.92
ERBB2-222ENST00000584908 CCDC88AQ3V6T2 1871 aa20.8■□□□□ 0.92
ERBB2-222ENST00000584908 SOGA3Q5TF21 947 aa20.79■□□□□ 0.92
ERBB2-222ENST00000584908 CRAMP1Q96RY5 1269 aa20.79■□□□□ 0.92
ERBB2-222ENST00000584908 C21orf2O43822 256 aa20.78■□□□□ 0.92
ERBB2-222ENST00000584908 IGKV5-2P06315 115 aa20.78■□□□□ 0.92
ERBB2-222ENST00000584908 ZBTB38Q8NAP3 1195 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 ZNF784Q8NCA9 323 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 RPGRQ92834 1020 aaKnown RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 FAM89AQ96GI7 184 aa20.78■□□□□ 0.92
ERBB2-222ENST00000584908 DICER1Q9UPY3 1922 aaKnown RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
ERBB2-222ENST00000584908 NFKBIEO00221 500 aa20.78■□□□□ 0.92
ERBB2-222ENST00000584908 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 CT47B1P0C2W7 299 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 HCLS1P14317 486 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 NEXNQ0ZGT2 675 aa20.78■□□□□ 0.92
ERBB2-222ENST00000584908 FKBP5Q13451 457 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-222ENST00000584908 SNED1Q8TER0 1413 aa20.77■□□□□ 0.91
ERBB2-222ENST00000584908 DNAAF4Q8WXU2 420 aa20.77■□□□□ 0.91
ERBB2-222ENST00000584908 RBM17Q96I25 401 aaKnown RBP20.77■□□□□ 0.91
ERBB2-222ENST00000584908 SF3B3Q15393 1217 aaKnown RBP20.76■□□□□ 0.91
ERBB2-222ENST00000584908 MYH3P11055 1940 aa20.75■□□□□ 0.91
ERBB2-222ENST00000584908 NEURL1BA8MQ27 555 aa20.75■□□□□ 0.91
ERBB2-222ENST00000584908 RASSF7Q02833 373 aa20.75■□□□□ 0.91
ERBB2-222ENST00000584908 C9orf131Q5VYM1 1079 aa20.75■□□□□ 0.91
ERBB2-222ENST00000584908 TAF1P21675 1872 aa20.74■□□□□ 0.91
ERBB2-222ENST00000584908 CDHR2Q9BYE9 1310 aa20.74■□□□□ 0.91
ERBB2-222ENST00000584908 IRS4O14654 1257 aaPredicted RBP20.74■□□□□ 0.91
ERBB2-222ENST00000584908 HSP90B1P14625 803 aaKnown RBP20.74■□□□□ 0.91
ERBB2-222ENST00000584908 LMNB1P20700 586 aa20.74■□□□□ 0.91
ERBB2-222ENST00000584908 PRELPP51888 382 aa20.74■□□□□ 0.91
ERBB2-222ENST00000584908 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
ERBB2-222ENST00000584908 CCDC93Q567U6 631 aa20.74■□□□□ 0.91
ERBB2-222ENST00000584908 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
ERBB2-222ENST00000584908 LINS1Q8NG48 757 aa20.74■□□□□ 0.91
ERBB2-222ENST00000584908 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
ERBB2-222ENST00000584908 ABCC4O15439 1325 aa20.73■□□□□ 0.91
ERBB2-222ENST00000584908 HNRNPUQ00839 825 aaKnown RBP eCLIP20.73■□□□□ 0.91
ERBB2-222ENST00000584908 CWF19L2Q2TBE0 894 aaKnown RBP20.73■□□□□ 0.91
ERBB2-222ENST00000584908 CC2D2BQ6DHV5 1058 aa20.73■□□□□ 0.91
ERBB2-222ENST00000584908 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
ERBB2-222ENST00000584908 ZC3H4Q9UPT8 1303 aaKnown RBP20.72■□□□□ 0.91
ERBB2-222ENST00000584908 RTKN2Q8IZC4 609 aa20.72■□□□□ 0.91
ERBB2-222ENST00000584908 SSH1Q8WYL5 1049 aa20.72■□□□□ 0.91
ERBB2-222ENST00000584908 TAOK3Q9H2K8 898 aa20.72■□□□□ 0.91
ERBB2-222ENST00000584908 LRRC37AA6NMS7 1700 aa20.71■□□□□ 0.91
ERBB2-222ENST00000584908 H7C1W4 665 aa20.71■□□□□ 0.91
ERBB2-222ENST00000584908 GCKRQ14397 625 aa20.71■□□□□ 0.91
ERBB2-222ENST00000584908 GRIPAP1Q4V328 841 aa20.71■□□□□ 0.91
ERBB2-222ENST00000584908 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-222ENST00000584908 BEND3Q5T5X7 828 aa20.71■□□□□ 0.91
ERBB2-222ENST00000584908 RNF181Q9P0P0 153 aa20.71■□□□□ 0.91
ERBB2-222ENST00000584908 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
ERBB2-222ENST00000584908 BBOX1O75936 387 aa20.7■□□□□ 0.9
ERBB2-222ENST00000584908 OLFM4Q6UX06 510 aa20.7■□□□□ 0.9
ERBB2-222ENST00000584908 DDX46Q7L014 1031 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms