RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 TSPYL6Q8N831 410 aa26.86■■□□□ 1.89
TOP3A-218ENST00000584669 UBN2Q6ZU65 1347 aa26.86■■□□□ 1.89
TOP3A-218ENST00000584669 DBF4Q9UBU7 674 aaPredicted RBP26.85■■□□□ 1.89
TOP3A-218ENST00000584669 VEGFAP15692 232 aaPredicted RBP26.84■■□□□ 1.89
TOP3A-218ENST00000584669 DPY19L2Q6NUT2 758 aa26.84■■□□□ 1.89
TOP3A-218ENST00000584669 ZNF34Q8IZ26 560 aa26.84■■□□□ 1.89
TOP3A-218ENST00000584669 LTBP3Q9NS15 1303 aa26.84■■□□□ 1.89
TOP3A-218ENST00000584669 NUTM1Q86Y26 1132 aa26.83■■□□□ 1.89
TOP3A-218ENST00000584669 WDR63Q8IWG1 891 aa26.83■■□□□ 1.89
TOP3A-218ENST00000584669 SMC1BQ8NDV3 1235 aa26.83■■□□□ 1.89
TOP3A-218ENST00000584669 CCDC93Q567U6 631 aa26.82■■□□□ 1.88
TOP3A-218ENST00000584669 NYXQ9GZU5 481 aa26.82■■□□□ 1.88
TOP3A-218ENST00000584669 CACNA1FO60840 1977 aa26.82■■□□□ 1.88
TOP3A-218ENST00000584669 CCER2I3L3R5 266 aa26.81■■□□□ 1.88
TOP3A-218ENST00000584669 HTRA3P83110 453 aa26.81■■□□□ 1.88
TOP3A-218ENST00000584669 SUSD4Q5VX71 490 aa26.81■■□□□ 1.88
TOP3A-218ENST00000584669 HYPKQ9NX55 129 aa26.81■■□□□ 1.88
TOP3A-218ENST00000584669 ABCC12Q96J65 1359 aa26.81■■□□□ 1.88
TOP3A-218ENST00000584669 KLRG2A4D1S0 409 aaPredicted RBP26.8■■□□□ 1.88
TOP3A-218ENST00000584669 FANCIQ9NVI1 1328 aa26.8■■□□□ 1.88
TOP3A-218ENST00000584669 DICER1Q9UPY3 1922 aaKnown RBP26.8■■□□□ 1.88
TOP3A-218ENST00000584669 LAMB2P55268 1798 aa26.79■■□□□ 1.88
TOP3A-218ENST00000584669 OLFM4Q6UX06 510 aa26.79■■□□□ 1.88
TOP3A-218ENST00000584669 SPINK5Q9NQ38 1064 aaPredicted RBP26.79■■□□□ 1.88
TOP3A-218ENST00000584669 WDR90Q96KV7 1748 aa26.79■■□□□ 1.88
TOP3A-218ENST00000584669 C7orf43Q8WVR3 580 aa26.78■■□□□ 1.88
TOP3A-218ENST00000584669 PHAXQ9H814 394 aaKnown RBP26.78■■□□□ 1.88
TOP3A-218ENST00000584669 IBTKQ9P2D0 1353 aaPredicted RBP26.78■■□□□ 1.88
TOP3A-218ENST00000584669 DIEXFQ68CQ4 756 aaKnown RBP26.77■■□□□ 1.88
TOP3A-218ENST00000584669 PLBD2Q8NHP8 589 aa26.77■■□□□ 1.88
TOP3A-218ENST00000584669 NTSR2O95665 410 aa26.76■■□□□ 1.87
TOP3A-218ENST00000584669 ALDH1B1P30837 517 aa26.76■■□□□ 1.87
TOP3A-218ENST00000584669 TCIRG1Q13488 830 aa26.76■■□□□ 1.87
TOP3A-218ENST00000584669 TWISTNBQ3B726 338 aaPredicted RBP26.76■■□□□ 1.87
TOP3A-218ENST00000584669 CCDC30Q5VVM6 783 aa26.76■■□□□ 1.87
TOP3A-218ENST00000584669 ANKRD13DQ6ZTN6 518 aa26.76■■□□□ 1.87
TOP3A-218ENST00000584669 TCERG1O14776 1098 aaKnown RBP26.75■■□□□ 1.87
TOP3A-218ENST00000584669 FKBP4Q02790 459 aaKnown RBP eCLIP26.75■■□□□ 1.87
TOP3A-218ENST00000584669 PARP10Q53GL7 1025 aa26.75■■□□□ 1.87
TOP3A-218ENST00000584669 HSP90AB3PQ58FF7 597 aa26.75■■□□□ 1.87
TOP3A-218ENST00000584669 DNAJC5GQ8N7S2 189 aa26.75■■□□□ 1.87
TOP3A-218ENST00000584669 RPGRQ92834 1020 aaKnown RBP26.75■■□□□ 1.87
TOP3A-218ENST00000584669 ZNF277Q9NRM2 450 aaPredicted RBP26.75■■□□□ 1.87
TOP3A-218ENST00000584669 DDNO94850 711 aaPredicted RBP26.74■■□□□ 1.87
TOP3A-218ENST00000584669 PPP1R42Q7Z4L9 355 aa26.74■■□□□ 1.87
TOP3A-218ENST00000584669 ZNF521Q96K83 1311 aa26.73■■□□□ 1.87
TOP3A-218ENST00000584669 POTECB2RU33 542 aa26.73■■□□□ 1.87
TOP3A-218ENST00000584669 NLRP10Q86W26 655 aa26.73■■□□□ 1.87
TOP3A-218ENST00000584669 RTKN2Q8IZC4 609 aa26.73■■□□□ 1.87
TOP3A-218ENST00000584669 ZNF428Q96B54 188 aa26.73■■□□□ 1.87
TOP3A-218ENST00000584669 DDX60Q8IY21 1712 aaKnown RBP26.73■■□□□ 1.87
TOP3A-218ENST00000584669 EXOSC9Q06265 439 aaKnown RBP26.72■■□□□ 1.87
TOP3A-218ENST00000584669 MIER1Q8N108 512 aa26.72■■□□□ 1.87
TOP3A-218ENST00000584669 UTP14AQ9BVJ6 771 aaKnown RBP26.72■■□□□ 1.87
TOP3A-218ENST00000584669 GOLGA2Q08379 1002 aa26.71■■□□□ 1.87
TOP3A-218ENST00000584669 CRY2Q49AN0 593 aa26.71■■□□□ 1.87
TOP3A-218ENST00000584669 RIC1Q4ADV7 1423 aa26.71■■□□□ 1.87
TOP3A-218ENST00000584669 CHMP4AQ9BY43 222 aa26.7■■□□□ 1.86
TOP3A-218ENST00000584669 TAF1P21675 1872 aa26.7■■□□□ 1.86
TOP3A-218ENST00000584669 ATP5J2-PTCD1G3V325 749 aa26.69■■□□□ 1.86
TOP3A-218ENST00000584669 RIC3Q7Z5B4 369 aa26.69■■□□□ 1.86
TOP3A-218ENST00000584669 VAMP4O75379 141 aa26.68■■□□□ 1.86
TOP3A-218ENST00000584669 SYNE4Q8N205 404 aa26.68■■□□□ 1.86
TOP3A-218ENST00000584669 KLRG1Q96E93 195 aa26.68■■□□□ 1.86
TOP3A-218ENST00000584669 ISCA1Q9BUE6 129 aa26.68■■□□□ 1.86
TOP3A-218ENST00000584669 STK31Q9BXU1 1019 aa26.68■■□□□ 1.86
TOP3A-218ENST00000584669 MYH16Q9H6N6 1097 aa26.68■■□□□ 1.86
TOP3A-218ENST00000584669 C3orf67Q6ZVT6 689 aa26.67■■□□□ 1.86
TOP3A-218ENST00000584669 RBM17Q96I25 401 aaKnown RBP26.67■■□□□ 1.86
TOP3A-218ENST00000584669 ZNF541Q9H0D2 1346 aa26.66■■□□□ 1.86
TOP3A-218ENST00000584669 IARSP41252 1262 aaKnown RBP26.66■■□□□ 1.86
TOP3A-218ENST00000584669 G2E3Q7L622 706 aa26.66■■□□□ 1.86
TOP3A-218ENST00000584669 TRMT112Q9UI30 125 aaKnown RBP26.66■■□□□ 1.86
TOP3A-218ENST00000584669 HOXA10P31260 410 aaPredicted RBP26.65■■□□□ 1.86
TOP3A-218ENST00000584669 IQCA1LA6NCM1 817 aa26.64■■□□□ 1.86
TOP3A-218ENST00000584669 SLC4A2P04920 1241 aa26.64■■□□□ 1.86
TOP3A-218ENST00000584669 SLC10A5Q5PT55 438 aa26.64■■□□□ 1.86
TOP3A-218ENST00000584669 NLRP3Q96P20 1036 aa26.64■■□□□ 1.86
TOP3A-218ENST00000584669 RNF123Q5XPI4 1314 aa26.64■■□□□ 1.85
TOP3A-218ENST00000584669 PPEF1O14829 653 aaPredicted RBP26.63■■□□□ 1.85
TOP3A-218ENST00000584669 DDX58O95786 925 aaKnown RBP26.63■■□□□ 1.85
TOP3A-218ENST00000584669 POTEIP0CG38 1075 aa26.63■■□□□ 1.85
TOP3A-218ENST00000584669 POTEJP0CG39 1038 aa26.63■■□□□ 1.85
TOP3A-218ENST00000584669 HCLS1P14317 486 aaPredicted RBP26.63■■□□□ 1.85
TOP3A-218ENST00000584669 CC2D2BQ6DHV5 1058 aa26.63■■□□□ 1.85
TOP3A-218ENST00000584669 CHADLQ6NUI6 762 aa26.63■■□□□ 1.85
TOP3A-218ENST00000584669 CRAMP1Q96RY5 1269 aa26.63■■□□□ 1.85
TOP3A-218ENST00000584669 MYD88Q99836 296 aa26.63■■□□□ 1.85
TOP3A-218ENST00000584669 SH3TC1Q8TE82 1336 aa26.63■■□□□ 1.85
TOP3A-218ENST00000584669 SLC51AQ86UW1 340 aa26.62■■□□□ 1.85
TOP3A-218ENST00000584669 PSMD1Q99460 953 aa26.62■■□□□ 1.85
TOP3A-218ENST00000584669 MAP3K2Q9Y2U5 619 aa26.62■■□□□ 1.85
TOP3A-218ENST00000584669 JDP2Q8WYK2 163 aa26.61■■□□□ 1.85
TOP3A-218ENST00000584669 L3MBTL3Q96JM7 780 aaPredicted RBP26.61■■□□□ 1.85
TOP3A-218ENST00000584669 PI4KAP2A4QPH2 592 aa26.6■■□□□ 1.85
TOP3A-218ENST00000584669 TRIM28Q13263 835 aaKnown RBP26.6■■□□□ 1.85
TOP3A-218ENST00000584669 EAPPQ56P03 285 aaPredicted RBP26.6■■□□□ 1.85
TOP3A-218ENST00000584669 KSR2Q6VAB6 950 aa26.6■■□□□ 1.85
TOP3A-218ENST00000584669 PI4KAP1Q8N8J0 262 aa26.6■■□□□ 1.85
TOP3A-218ENST00000584669 FAM89AQ96GI7 184 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms