RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ZSCAN23Q3MJ62 389 aa13.48□□□□□ -0.25
TOP3A-217ENST00000584582 IQSEC3Q9UPP2 1182 aaPredicted RBP13.48□□□□□ -0.25
TOP3A-217ENST00000584582 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
TOP3A-217ENST00000584582 CWC25Q9NXE8 425 aaPredicted RBP13.48□□□□□ -0.25
TOP3A-217ENST00000584582 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-217ENST00000584582 NEURL1BA8MQ27 555 aa13.47□□□□□ -0.25
TOP3A-217ENST00000584582 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
TOP3A-217ENST00000584582 CPLX1O14810 134 aa13.47□□□□□ -0.25
TOP3A-217ENST00000584582 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
TOP3A-217ENST00000584582 TRMT112Q9UI30 125 aaKnown RBP13.46□□□□□ -0.25
TOP3A-217ENST00000584582 STX6O43752 255 aa13.46□□□□□ -0.25
TOP3A-217ENST00000584582 ATP2B1P20020 1258 aa13.46□□□□□ -0.25
TOP3A-217ENST00000584582 CCDC158Q5M9N0 1113 aa13.46□□□□□ -0.25
TOP3A-217ENST00000584582 SPC24Q8NBT2 197 aa13.46□□□□□ -0.25
TOP3A-217ENST00000584582 A0A0D9SFI3 127 aa13.46□□□□□ -0.26
TOP3A-217ENST00000584582 ESPNB1AK53 854 aa13.46□□□□□ -0.26
TOP3A-217ENST00000584582 KLHL40Q2TBA0 621 aa13.46□□□□□ -0.26
TOP3A-217ENST00000584582 USP48Q86UV5 1035 aa13.46□□□□□ -0.26
TOP3A-217ENST00000584582 METTL22Q9BUU2 404 aaPredicted RBP13.46□□□□□ -0.26
TOP3A-217ENST00000584582 SLAIN2Q9P270 581 aa13.46□□□□□ -0.26
TOP3A-217ENST00000584582 MTMR7Q9Y216 660 aa13.46□□□□□ -0.26
TOP3A-217ENST00000584582 GADD45BO75293 160 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-217ENST00000584582 IGKV5-2P06315 115 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 IL2RBP14784 551 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 DNM1Q05193 864 aaKnown RBP13.45□□□□□ -0.26
TOP3A-217ENST00000584582 DNAJC10Q8IXB1 793 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 BRF1Q92994 677 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 RRAGDQ9NQL2 400 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-217ENST00000584582 TECPR2O15040 1411 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 CREB3L3Q68CJ9 461 aa13.45□□□□□ -0.26
TOP3A-217ENST00000584582 RALYLQ86SE5 291 aaKnown RBP13.45□□□□□ -0.26
TOP3A-217ENST00000584582 HIP1O00291 1037 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 SASH1O94885 1247 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 CKAP2LQ8IYA6 745 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 ZNF335Q9H4Z2 1342 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-217ENST00000584582 MBD3O95983 291 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 NSFL1CQ9UNZ2 370 aaKnown RBP13.44□□□□□ -0.26
TOP3A-217ENST00000584582 KDRP35968 1356 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 PHF14O94880 888 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 STARD3NLO95772 234 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 IFIT5Q13325 482 aaKnown RBP13.44□□□□□ -0.26
TOP3A-217ENST00000584582 GIMAP6Q6P9H5 292 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 NFXL1Q6ZNB6 911 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 FAM43AQ8N2R8 423 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 ASAP1Q9ULH1 1129 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 ADGRB2O60241 1585 aa13.44□□□□□ -0.26
TOP3A-217ENST00000584582 SYT1P21579 422 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 PI4K2BQ8TCG2 481 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 KIF24Q5T7B8 1368 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 HOXB7P09629 217 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 CCDC144CPQ8IYA2 1237 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
TOP3A-217ENST00000584582 PUS3Q9BZE2 481 aaKnown RBP13.43□□□□□ -0.26
TOP3A-217ENST00000584582 KCNQ4P56696 695 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 VPS37DQ86XT2 251 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 LMBRD1Q9NUN5 540 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 EXOC5O00471 708 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 LARGE1O95461 756 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 TRDNQ13061 729 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 ABCF2Q9UG63 623 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 ADCY9O60503 1353 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 RAD50Q92878 1312 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 DIP2AQ14689 1571 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 HCLS1P14317 486 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-217ENST00000584582 HSPA4P34932 840 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 SLC4A8Q2Y0W8 1093 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 TNNI3KQ59H18 835 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 ZNF589Q86UQ0 364 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-217ENST00000584582 CCDC24Q8N4L8 307 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-217ENST00000584582 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 FPGT-TNNI3KV9GXZ4 949 aa13.42□□□□□ -0.26
TOP3A-217ENST00000584582 KIAA2012Q0VF49 1180 aa13.41□□□□□ -0.26
TOP3A-217ENST00000584582 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
TOP3A-217ENST00000584582 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
TOP3A-217ENST00000584582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-217ENST00000584582 RBSNQ9H1K0 784 aa13.41□□□□□ -0.26
TOP3A-217ENST00000584582 DBNLQ9UJU6 430 aaKnown RBP13.41□□□□□ -0.26
TOP3A-217ENST00000584582 R3HCC1Q9Y3T6 440 aaKnown RBP13.41□□□□□ -0.26
TOP3A-217ENST00000584582 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
TOP3A-217ENST00000584582 ANAPC15P60006 121 aa13.4□□□□□ -0.26
TOP3A-217ENST00000584582 CSPP1Q1MSJ5 1256 aa13.4□□□□□ -0.26
TOP3A-217ENST00000584582 RUFY3Q7L099 469 aa13.4□□□□□ -0.26
TOP3A-217ENST00000584582 SPATA32Q96LK8 384 aa13.4□□□□□ -0.26
TOP3A-217ENST00000584582 NEK1Q96PY6 1258 aa13.4□□□□□ -0.26
TOP3A-217ENST00000584582 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
TOP3A-217ENST00000584582 ZSCAN22P10073 491 aaPredicted RBP13.4□□□□□ -0.26
TOP3A-217ENST00000584582 A0A1B0GUL7 405 aa13.4□□□□□ -0.27
TOP3A-217ENST00000584582 KRT85P78386 507 aa13.4□□□□□ -0.27
TOP3A-217ENST00000584582 Q6ZUG5 572 aa13.4□□□□□ -0.27
TOP3A-217ENST00000584582 PIBF1Q8WXW3 757 aa13.4□□□□□ -0.27
TOP3A-217ENST00000584582 NCOA5Q9HCD5 579 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms