RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 ADCY9O60503 1353 aa34.92■■■■□ 3.18
SMARCD2-210ENST00000584400 CRY2Q49AN0 593 aa34.92■■■■□ 3.18
SMARCD2-210ENST00000584400 NLRP3Q96P20 1036 aa34.92■■■■□ 3.18
SMARCD2-210ENST00000584400 TRMT112Q9UI30 125 aaKnown RBP34.92■■■■□ 3.18
SMARCD2-210ENST00000584400 C21orf2O43822 256 aa34.91■■■■□ 3.18
SMARCD2-210ENST00000584400 SLC10A5Q5PT55 438 aa34.91■■■■□ 3.18
SMARCD2-210ENST00000584400 RPGRQ92834 1020 aaKnown RBP34.91■■■■□ 3.18
SMARCD2-210ENST00000584400 ISCA1Q9BUE6 129 aa34.9■■■■□ 3.18
SMARCD2-210ENST00000584400 COL11A2P13942 1736 aaPredicted RBP34.89■■■■□ 3.18
SMARCD2-210ENST00000584400 SH3TC1Q8TE82 1336 aa34.89■■■■□ 3.18
SMARCD2-210ENST00000584400 EXOSC9Q06265 439 aaKnown RBP34.89■■■■□ 3.18
SMARCD2-210ENST00000584400 C9orf131Q5VYM1 1079 aa34.89■■■■□ 3.18
SMARCD2-210ENST00000584400 TRIM28Q13263 835 aaKnown RBP34.88■■■■□ 3.17
SMARCD2-210ENST00000584400 ZNF219Q9P2Y4 722 aaPredicted RBP34.88■■■■□ 3.17
SMARCD2-210ENST00000584400 ZNF521Q96K83 1311 aa34.87■■■■□ 3.17
SMARCD2-210ENST00000584400 SLC4A2P04920 1241 aa34.86■■■■□ 3.17
SMARCD2-210ENST00000584400 LMNB1P20700 586 aa34.86■■■■□ 3.17
SMARCD2-210ENST00000584400 RBM17Q96I25 401 aaKnown RBP34.86■■■■□ 3.17
SMARCD2-210ENST00000584400 SPINK5Q9NQ38 1064 aaPredicted RBP34.86■■■■□ 3.17
SMARCD2-210ENST00000584400 RNF181Q9P0P0 153 aa34.86■■■■□ 3.17
SMARCD2-210ENST00000584400 ATP5J2-PTCD1G3V325 749 aa34.85■■■■□ 3.17
SMARCD2-210ENST00000584400 VAMP4O75379 141 aa34.85■■■■□ 3.17
SMARCD2-210ENST00000584400 HOXA10P31260 410 aaPredicted RBP34.85■■■■□ 3.17
SMARCD2-210ENST00000584400 GPBP1L1Q9HC44 474 aaPredicted RBP34.85■■■■□ 3.17
SMARCD2-210ENST00000584400 ANKRD36CQ5JPF3 1778 aa34.85■■■■□ 3.17
SMARCD2-210ENST00000584400 TCERG1O14776 1098 aaKnown RBP34.83■■■■□ 3.17
SMARCD2-210ENST00000584400 CCDC93Q567U6 631 aa34.83■■■■□ 3.17
SMARCD2-210ENST00000584400 KSR2Q6VAB6 950 aa34.83■■■■□ 3.17
SMARCD2-210ENST00000584400 RASSF7Q02833 373 aa34.82■■■■□ 3.16
SMARCD2-210ENST00000584400 CRAMP1Q96RY5 1269 aa34.82■■■■□ 3.16
SMARCD2-210ENST00000584400 METTL22Q9BUU2 404 aaPredicted RBP34.82■■■■□ 3.16
SMARCD2-210ENST00000584400 E9PSI1 815 aa34.81■■■■□ 3.16
SMARCD2-210ENST00000584400 NFKBIEO00221 500 aa34.81■■■■□ 3.16
SMARCD2-210ENST00000584400 HSP90B1P14625 803 aaKnown RBP34.81■■■■□ 3.16
SMARCD2-210ENST00000584400 MYD88Q99836 296 aa34.81■■■■□ 3.16
SMARCD2-210ENST00000584400 TAOK3Q9H2K8 898 aa34.81■■■■□ 3.16
SMARCD2-210ENST00000584400 LTBP3Q9NS15 1303 aa34.81■■■■□ 3.16
SMARCD2-210ENST00000584400 ZC3H4Q9UPT8 1303 aaKnown RBP34.81■■■■□ 3.16
SMARCD2-210ENST00000584400 CCDC191Q8NCU4 936 aa34.8■■■■□ 3.16
SMARCD2-210ENST00000584400 C7orf43Q8WVR3 580 aa34.8■■■■□ 3.16
SMARCD2-210ENST00000584400 MAP3K2Q9Y2U5 619 aa34.8■■■■□ 3.16
SMARCD2-210ENST00000584400 TNRC6CQ9HCJ0 1690 aaKnown RBP34.79■■■■□ 3.16
SMARCD2-210ENST00000584400 NEXNQ0ZGT2 675 aa34.79■■■■□ 3.16
SMARCD2-210ENST00000584400 CC2D2BQ6DHV5 1058 aa34.79■■■■□ 3.16
SMARCD2-210ENST00000584400 RTKN2Q8IZC4 609 aa34.79■■■■□ 3.16
SMARCD2-210ENST00000584400 PI4KAP2A4QPH2 592 aa34.78■■■■□ 3.16
SMARCD2-210ENST00000584400 HCLS1P14317 486 aaPredicted RBP34.78■■■■□ 3.16
SMARCD2-210ENST00000584400 PI4KAP1Q8N8J0 262 aa34.78■■■■□ 3.16
SMARCD2-210ENST00000584400 ZNF526Q8TF50 670 aaPredicted RBP34.78■■■■□ 3.16
SMARCD2-210ENST00000584400 GRIPAP1Q4V328 841 aa34.77■■■■□ 3.16
SMARCD2-210ENST00000584400 TMX4Q9H1E5 349 aaPredicted RBP34.77■■■■□ 3.16
SMARCD2-210ENST00000584400 FLIIQ13045 1269 aa34.76■■■■□ 3.16
SMARCD2-210ENST00000584400 ZBTB38Q8NAP3 1195 aaPredicted RBP34.76■■■■□ 3.16
SMARCD2-210ENST00000584400 FAM89AQ96GI7 184 aa34.76■■■■□ 3.16
SMARCD2-210ENST00000584400 CWC25Q9NXE8 425 aaPredicted RBP34.76■■■■□ 3.16
SMARCD2-210ENST00000584400 ARFGEF2Q9Y6D5 1785 aa34.76■■■■□ 3.15
SMARCD2-210ENST00000584400 C3orf67Q6ZVT6 689 aa34.75■■■■□ 3.15
SMARCD2-210ENST00000584400 MIER1Q8N108 512 aa34.75■■■■□ 3.15
SMARCD2-210ENST00000584400 SLX4Q8IY92 1834 aa34.75■■■■□ 3.15
SMARCD2-210ENST00000584400 SYNE4Q8N205 404 aa34.74■■■■□ 3.15
SMARCD2-210ENST00000584400 FKBP5Q13451 457 aaPredicted RBP34.73■■■■□ 3.15
SMARCD2-210ENST00000584400 DDX46Q7L014 1031 aaKnown RBP34.73■■■■□ 3.15
SMARCD2-210ENST00000584400 G2E3Q7L622 706 aa34.73■■■■□ 3.15
SMARCD2-210ENST00000584400 PPEF1O14829 653 aaPredicted RBP34.72■■■■□ 3.15
SMARCD2-210ENST00000584400 KDM2BQ8NHM5 1336 aa34.72■■■■□ 3.15
SMARCD2-210ENST00000584400 IRS4O14654 1257 aaPredicted RBP34.71■■■■□ 3.15
SMARCD2-210ENST00000584400 FKBP4Q02790 459 aaKnown RBP eCLIP34.71■■■■□ 3.15
SMARCD2-210ENST00000584400 ZNF428Q96B54 188 aa34.71■■■■□ 3.15
SMARCD2-210ENST00000584400 BBOX1O75936 387 aa34.7■■■■□ 3.15
SMARCD2-210ENST00000584400 PCCAP05165 728 aaPredicted RBP34.7■■■■□ 3.15
SMARCD2-210ENST00000584400 SLFN5Q08AF3 891 aa34.7■■■■□ 3.15
SMARCD2-210ENST00000584400 PRELPP51888 382 aa34.69■■■■□ 3.14
SMARCD2-210ENST00000584400 RTL5Q5HYW3 569 aaPredicted RBP34.69■■■■□ 3.14
SMARCD2-210ENST00000584400 ABCC4O15439 1325 aa34.68■■■■□ 3.14
SMARCD2-210ENST00000584400 SF3B3Q15393 1217 aaKnown RBP34.68■■■■□ 3.14
SMARCD2-210ENST00000584400 TMC4Q7Z404 712 aa34.66■■■■□ 3.14
SMARCD2-210ENST00000584400 DNAAF4Q8WXU2 420 aa34.66■■■■□ 3.14
SMARCD2-210ENST00000584400 PSMD1Q99460 953 aa34.66■■■■□ 3.14
SMARCD2-210ENST00000584400 CACNA1SQ13698 1873 aa34.65■■■■□ 3.14
SMARCD2-210ENST00000584400 FER1L6Q2WGJ9 1857 aa34.65■■■■□ 3.14
SMARCD2-210ENST00000584400 GRAPQ13588 217 aa34.65■■■■□ 3.14
SMARCD2-210ENST00000584400 DPY19L2Q6NUT2 758 aa34.65■■■■□ 3.14
SMARCD2-210ENST00000584400 OLFM4Q6UX06 510 aa34.65■■■■□ 3.14
SMARCD2-210ENST00000584400 GRAPLQ8TC17 118 aaPredicted RBP34.65■■■■□ 3.14
SMARCD2-210ENST00000584400 ATP6V0A2Q9Y487 856 aa34.65■■■■□ 3.14
SMARCD2-210ENST00000584400 IGKV5-2P06315 115 aa34.64■■■■□ 3.14
SMARCD2-210ENST00000584400 SBF1O95248 1867 aa34.63■■■■□ 3.13
SMARCD2-210ENST00000584400 NEURL1BA8MQ27 555 aa34.62■■■■□ 3.13
SMARCD2-210ENST00000584400 PDE8AO60658 829 aa34.62■■■■□ 3.13
SMARCD2-210ENST00000584400 CDHR2Q9BYE9 1310 aa34.61■■■■□ 3.13
SMARCD2-210ENST00000584400 GLTPD2A6NH11 291 aa34.61■■■■□ 3.13
SMARCD2-210ENST00000584400 CWF19L2Q2TBE0 894 aaKnown RBP34.61■■■■□ 3.13
SMARCD2-210ENST00000584400 SP8Q8IXZ3 490 aa34.61■■■■□ 3.13
SMARCD2-210ENST00000584400 LINS1Q8NG48 757 aa34.61■■■■□ 3.13
SMARCD2-210ENST00000584400 C1QTNF8P60827 252 aa34.6■■■■□ 3.13
SMARCD2-210ENST00000584400 ZNF277Q9NRM2 450 aaPredicted RBP34.6■■■■□ 3.13
SMARCD2-210ENST00000584400 IARSP41252 1262 aaKnown RBP34.59■■■■□ 3.13
SMARCD2-210ENST00000584400 CCDC152Q4G0S7 254 aa34.59■■■■□ 3.13
SMARCD2-210ENST00000584400 CDCA7LQ96GN5 454 aa34.59■■■■□ 3.13
SMARCD2-210ENST00000584400 CACNA1FO60840 1977 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms