RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 SRP68Q9UHB9 627 aaKnown RBP22.75■■□□□ 1.23
NDEL1-217ENST00000583683 UBN2Q6ZU65 1347 aa22.74■■□□□ 1.23
NDEL1-217ENST00000583683 ZPR1O75312 459 aa22.74■■□□□ 1.23
NDEL1-217ENST00000583683 RFC4P35249 363 aa22.74■■□□□ 1.23
NDEL1-217ENST00000583683 HDAC1Q13547 482 aaPredicted RBP22.74■■□□□ 1.23
NDEL1-217ENST00000583683 USPL1Q5W0Q7 1092 aa22.74■■□□□ 1.23
NDEL1-217ENST00000583683 USP42Q9H9J4 1324 aaKnown RBP22.74■■□□□ 1.23
NDEL1-217ENST00000583683 H7C1W4 665 aa22.73■■□□□ 1.23
NDEL1-217ENST00000583683 CASP7P55210 303 aa22.73■■□□□ 1.23
NDEL1-217ENST00000583683 UBE3BQ7Z3V4 1068 aa22.73■■□□□ 1.23
NDEL1-217ENST00000583683 RPAP2Q8IXW5 612 aaPredicted RBP22.73■■□□□ 1.23
NDEL1-217ENST00000583683 ANKRD44Q8N8A2 993 aa22.73■■□□□ 1.23
NDEL1-217ENST00000583683 JARID2Q92833 1246 aaPredicted RBP22.73■■□□□ 1.23
NDEL1-217ENST00000583683 KAZALD1Q96I82 304 aa22.73■■□□□ 1.23
NDEL1-217ENST00000583683 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
NDEL1-217ENST00000583683 TFCP2L1Q9NZI6 479 aa22.73■■□□□ 1.23
NDEL1-217ENST00000583683 SUCLG2Q96I99 432 aa22.72■■□□□ 1.23
NDEL1-217ENST00000583683 HDAC5Q9UQL6 1122 aa22.72■■□□□ 1.23
NDEL1-217ENST00000583683 CENPQQ7L2Z9 268 aaPredicted RBP22.71■■□□□ 1.23
NDEL1-217ENST00000583683 NIP7Q9Y221 180 aaKnown RBP eCLIP22.71■■□□□ 1.23
NDEL1-217ENST00000583683 ZBTB38Q8NAP3 1195 aaPredicted RBP22.7■■□□□ 1.22
NDEL1-217ENST00000583683 PCCAP05165 728 aaPredicted RBP22.69■■□□□ 1.22
NDEL1-217ENST00000583683 RTL5Q5HYW3 569 aaPredicted RBP22.69■■□□□ 1.22
NDEL1-217ENST00000583683 ANO8Q9HCE9 1232 aaPredicted RBP22.69■■□□□ 1.22
NDEL1-217ENST00000583683 ATP8B2P98198 1209 aa22.68■■□□□ 1.22
NDEL1-217ENST00000583683 PARP10Q53GL7 1025 aa22.68■■□□□ 1.22
NDEL1-217ENST00000583683 TBC1D9BQ66K14 1250 aa22.68■■□□□ 1.22
NDEL1-217ENST00000583683 BICC1Q9H694 974 aaKnown RBP22.68■■□□□ 1.22
NDEL1-217ENST00000583683 COL24A1Q17RW2 1714 aa22.68■■□□□ 1.22
NDEL1-217ENST00000583683 PNMA6EA0A0J9YXQ4 647 aa22.68■■□□□ 1.22
NDEL1-217ENST00000583683 SUSD4Q5VX71 490 aa22.68■■□□□ 1.22
NDEL1-217ENST00000583683 FAM89AQ96GI7 184 aa22.68■■□□□ 1.22
NDEL1-217ENST00000583683 QSER1Q2KHR3 1735 aa22.67■■□□□ 1.22
NDEL1-217ENST00000583683 EPHA10Q5JZY3 1008 aa22.67■■□□□ 1.22
NDEL1-217ENST00000583683 MTX1Q13505 466 aa22.66■■□□□ 1.22
NDEL1-217ENST00000583683 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
NDEL1-217ENST00000583683 TRMT112Q9UI30 125 aaKnown RBP22.66■■□□□ 1.22
NDEL1-217ENST00000583683 GYS1P13807 737 aa22.66■■□□□ 1.22
NDEL1-217ENST00000583683 SLC15A2Q16348 729 aa22.66■■□□□ 1.22
NDEL1-217ENST00000583683 PPP1R42Q7Z4L9 355 aa22.66■■□□□ 1.22
NDEL1-217ENST00000583683 SYNE4Q8N205 404 aa22.66■■□□□ 1.22
NDEL1-217ENST00000583683 FLAD1Q8NFF5 587 aa22.66■■□□□ 1.22
NDEL1-217ENST00000583683 HMMRO75330 724 aa22.65■■□□□ 1.22
NDEL1-217ENST00000583683 BICDL1Q6ZP65 573 aa22.65■■□□□ 1.22
NDEL1-217ENST00000583683 PNPLA7Q6ZV29 1317 aa22.65■■□□□ 1.22
NDEL1-217ENST00000583683 CDHR2Q9BYE9 1310 aa22.65■■□□□ 1.22
NDEL1-217ENST00000583683 NTSR2O95665 410 aa22.64■■□□□ 1.22
NDEL1-217ENST00000583683 SSH3Q8TE77 659 aa22.64■■□□□ 1.22
NDEL1-217ENST00000583683 UTP14AQ9BVJ6 771 aaKnown RBP22.64■■□□□ 1.22
NDEL1-217ENST00000583683 MYH3P11055 1940 aa22.64■■□□□ 1.22
NDEL1-217ENST00000583683 FAM177BA6PVY3 158 aa22.64■■□□□ 1.21
NDEL1-217ENST00000583683 SRGAP3O43295 1099 aa22.64■■□□□ 1.21
NDEL1-217ENST00000583683 FOXO4P98177 505 aa22.64■■□□□ 1.21
NDEL1-217ENST00000583683 RABL6Q3YEC7 729 aaPredicted RBP22.64■■□□□ 1.21
NDEL1-217ENST00000583683 SMC5Q8IY18 1101 aa22.64■■□□□ 1.21
NDEL1-217ENST00000583683 UPF1Q92900 1129 aaKnown RBP eCLIP22.64■■□□□ 1.211e-7■■■■■ 30.3
NDEL1-217ENST00000583683 SETDB2Q96T68 719 aa22.64■■□□□ 1.21
NDEL1-217ENST00000583683 STK32BQ9NY57 414 aa22.64■■□□□ 1.21
NDEL1-217ENST00000583683 POLA2Q14181 598 aa22.63■■□□□ 1.21
NDEL1-217ENST00000583683 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
NDEL1-217ENST00000583683 SH3TC1Q8TE82 1336 aa22.62■■□□□ 1.21
NDEL1-217ENST00000583683 PLA2G12BQ9BX93 195 aa22.62■■□□□ 1.21
NDEL1-217ENST00000583683 LAMB2P55268 1798 aa22.62■■□□□ 1.21
NDEL1-217ENST00000583683 DCTPP1Q9H773 170 aa22.61■■□□□ 1.21
NDEL1-217ENST00000583683 IRS4O14654 1257 aaPredicted RBP22.61■■□□□ 1.21
NDEL1-217ENST00000583683 NFIXQ14938 502 aa22.61■■□□□ 1.21
NDEL1-217ENST00000583683 GCC1Q96CN9 775 aa22.61■■□□□ 1.21
NDEL1-217ENST00000583683 MSH5O43196 834 aa22.59■■□□□ 1.21
NDEL1-217ENST00000583683 LMBR1LQ6UX01 489 aa22.59■■□□□ 1.21
NDEL1-217ENST00000583683 NUTM1Q86Y26 1132 aa22.59■■□□□ 1.21
NDEL1-217ENST00000583683 CARMIL3Q8ND23 1372 aa22.59■■□□□ 1.21
NDEL1-217ENST00000583683 TM4SF1P30408 202 aa22.58■■□□□ 1.21
NDEL1-217ENST00000583683 NBPF5PQ86XG9 351 aaPredicted RBP22.57■■□□□ 1.2
NDEL1-217ENST00000583683 NYXQ9GZU5 481 aa22.57■■□□□ 1.2
NDEL1-217ENST00000583683 CASZ1Q86V15 1759 aa22.57■■□□□ 1.2
NDEL1-217ENST00000583683 PDE8AO60658 829 aa22.57■■□□□ 1.2
NDEL1-217ENST00000583683 ERFEQ4G0M1 354 aa22.57■■□□□ 1.2
NDEL1-217ENST00000583683 CSF1RP07333 972 aa22.56■■□□□ 1.2
NDEL1-217ENST00000583683 HCLS1P14317 486 aaPredicted RBP22.56■■□□□ 1.2
NDEL1-217ENST00000583683 TPTE2Q6XPS3 522 aa22.56■■□□□ 1.2
NDEL1-217ENST00000583683 EXOC6BQ9Y2D4 811 aa22.56■■□□□ 1.2
NDEL1-217ENST00000583683 CTSWP56202 376 aa22.55■■□□□ 1.2
NDEL1-217ENST00000583683 NLGN1Q8N2Q7 840 aa22.55■■□□□ 1.2
NDEL1-217ENST00000583683 TTLL11Q8NHH1 800 aa22.55■■□□□ 1.2
NDEL1-217ENST00000583683 TSHZ2Q9NRE2 1034 aa22.55■■□□□ 1.2
NDEL1-217ENST00000583683 RFX5P48382 616 aaPredicted RBP22.54■■□□□ 1.2
NDEL1-217ENST00000583683 PDZRN3Q9UPQ7 1066 aa22.54■■□□□ 1.2
NDEL1-217ENST00000583683 CHMP3Q9Y3E7 222 aa22.54■■□□□ 1.2
NDEL1-217ENST00000583683 HSP90B1P14625 803 aaKnown RBP22.54■■□□□ 1.2
NDEL1-217ENST00000583683 NUCB1Q02818 461 aa22.54■■□□□ 1.2
NDEL1-217ENST00000583683 SKAP1Q86WV1 359 aa22.54■■□□□ 1.2
NDEL1-217ENST00000583683 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
NDEL1-217ENST00000583683 ABCC12Q96J65 1359 aa22.54■■□□□ 1.2
NDEL1-217ENST00000583683 SURF6O75683 361 aaKnown RBP22.53■■□□□ 1.2
NDEL1-217ENST00000583683 GTF2E1P29083 439 aaPredicted RBP22.53■■□□□ 1.2
NDEL1-217ENST00000583683 DDR1Q08345 913 aa22.53■■□□□ 1.2
NDEL1-217ENST00000583683 SLC10A5Q5PT55 438 aa22.53■■□□□ 1.2
NDEL1-217ENST00000583683 PA2G4Q9UQ80 394 aaKnown RBP22.53■■□□□ 1.2
NDEL1-217ENST00000583683 KLHDC4Q8TBB5 520 aa22.52■■□□□ 1.2
NDEL1-217ENST00000583683 POLRMTO00411 1230 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms