RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
SMARCE1-219ENST00000583294 IGF1RP08069 1367 aa9.82□□□□□ -0.84
SMARCE1-219ENST00000583294 MICAL2O94851 1124 aa9.81□□□□□ -0.84
SMARCE1-219ENST00000583294 HIF1AQ16665 826 aa9.81□□□□□ -0.84
SMARCE1-219ENST00000583294 CRISPLD1Q9H336 500 aa9.81□□□□□ -0.84
SMARCE1-219ENST00000583294 CCDC87Q9NVE4 849 aa9.81□□□□□ -0.84
SMARCE1-219ENST00000583294 GPC6Q9Y625 555 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-219ENST00000583294 TGFBR3LH3BV60 316 aa9.8□□□□□ -0.84
SMARCE1-219ENST00000583294 MAPK1P28482 360 aa9.8□□□□□ -0.84
SMARCE1-219ENST00000583294 ZAP70P43403 619 aa9.8□□□□□ -0.84
SMARCE1-219ENST00000583294 RASSF7Q02833 373 aa9.8□□□□□ -0.84
SMARCE1-219ENST00000583294 ALKBH2Q6NS38 261 aa9.8□□□□□ -0.84
SMARCE1-219ENST00000583294 TRERF1Q96PN7 1200 aa9.8□□□□□ -0.84
SMARCE1-219ENST00000583294 DNM1Q05193 864 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-219ENST00000583294 EFHC2Q5JST6 749 aa9.79□□□□□ -0.84
SMARCE1-219ENST00000583294 FZD6O60353 706 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 IDH3AP50213 366 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 MAP3K10Q02779 954 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 BTLAQ7Z6A9 289 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 TMEM151AQ8N4L1 468 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 GPR152Q8TDT2 470 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 EDEM1Q92611 657 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 CEP63Q96MT8 703 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 DMGDHQ9UI17 866 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 DCTN4Q9UJW0 460 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 BRPF3Q9ULD4 1205 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
SMARCE1-219ENST00000583294 GDF11O95390 407 aa9.77□□□□□ -0.85
SMARCE1-219ENST00000583294 MX2P20592 715 aa9.77□□□□□ -0.85
SMARCE1-219ENST00000583294 IRS1P35568 1242 aa9.77□□□□□ -0.85
SMARCE1-219ENST00000583294 ACDQ96AP0 544 aa9.77□□□□□ -0.85
SMARCE1-219ENST00000583294 OPLAHO14841 1288 aa9.76□□□□□ -0.85
SMARCE1-219ENST00000583294 NDUFB5O43674 189 aa9.76□□□□□ -0.85
SMARCE1-219ENST00000583294 IER5Q5VY09 327 aa9.76□□□□□ -0.85
SMARCE1-219ENST00000583294 NLRP8Q86W28 1048 aa9.76□□□□□ -0.85
SMARCE1-219ENST00000583294 RGL4Q8IZJ4 473 aa9.76□□□□□ -0.85
SMARCE1-219ENST00000583294 ZCCHC2Q9C0B9 1178 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-219ENST00000583294 POLIQ9UNA4 740 aa9.76□□□□□ -0.85
SMARCE1-219ENST00000583294 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-219ENST00000583294 UBAP2LQ14157 1087 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-219ENST00000583294 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
SMARCE1-219ENST00000583294 MZF1P28698 734 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-219ENST00000583294 INPP5BP32019 993 aa9.74□□□□□ -0.85
SMARCE1-219ENST00000583294 ARSDP51689 593 aa9.74□□□□□ -0.85
SMARCE1-219ENST00000583294 TYRO3Q06418 890 aa9.74□□□□□ -0.85
SMARCE1-219ENST00000583294 CFHR5Q9BXR6 569 aa9.74□□□□□ -0.85
SMARCE1-219ENST00000583294 ATXN7O15265 892 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 PDGFAP04085 211 aa9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 BCRP11274 1271 aa9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 DNAJC14Q6Y2X3 702 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 RGS22Q8NE09 1264 aa9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 NUDT16Q96DE0 195 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 ENAMQ9NRM1 1142 aa9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-219ENST00000583294 DCDC2BA2VCK2 349 aa9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 KHNYNO15037 678 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 LBRQ14739 615 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 FIGNL1Q6PIW4 674 aa9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 PIK3R5Q8WYR1 880 aa9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 SCARF2Q96GP6 870 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 BRD7Q9NPI1 651 aa9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 PCDHGC4Q9Y5F7 938 aa9.72□□□□□ -0.85
SMARCE1-219ENST00000583294 ANKRD33BA6NCL7 494 aa9.71□□□□□ -0.86
SMARCE1-219ENST00000583294 PCSK2P16519 638 aa9.71□□□□□ -0.86
SMARCE1-219ENST00000583294 C8orf34Q49A92 452 aa9.71□□□□□ -0.86
SMARCE1-219ENST00000583294 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
SMARCE1-219ENST00000583294 ZSCAN29Q8IWY8 852 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1-219ENST00000583294 NSFL1CQ9UNZ2 370 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-219ENST00000583294 CNTNAP5Q8WYK1 1306 aa9.71□□□□□ -0.86
SMARCE1-219ENST00000583294 A6NHS1 94 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 BNIP3LO60238 219 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 SFSWAPQ12872 951 aaKnown RBP9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 TMC7Q7Z402 723 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 NEDD1Q8NHV4 660 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 ABHD17AQ96GS6 310 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 ASB16Q96NS5 453 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 RBCK1Q9BYM8 510 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 GGNBP2Q9H3C7 697 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 PHF24Q9UPV7 400 aa9.7□□□□□ -0.86
SMARCE1-219ENST00000583294 EPB42P16452 691 aa9.69□□□□□ -0.86
SMARCE1-219ENST00000583294 GRNP28799 593 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-219ENST00000583294 TTC16Q8NEE8 873 aa9.69□□□□□ -0.86
SMARCE1-219ENST00000583294 FAM157BP0CG42 384 aa9.68□□□□□ -0.86
SMARCE1-219ENST00000583294 MAPTP10636 758 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-219ENST00000583294 TNP2Q05952 138 aa9.68□□□□□ -0.86
SMARCE1-219ENST00000583294 CITED4Q96RK1 184 aa9.68□□□□□ -0.86
SMARCE1-219ENST00000583294 OXCT2Q9BYC2 517 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-219ENST00000583294 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
SMARCE1-219ENST00000583294 KCNH4Q9UQ05 1017 aa9.68□□□□□ -0.86
SMARCE1-219ENST00000583294 UBAP1LF5GYI3 381 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 C2CD2LO14523 706 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 OIP5O43482 229 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 USP5P45974 858 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 MAP2K3P46734 347 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 GRIN2CQ14957 1233 aa9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 TRIP4Q15650 581 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-219ENST00000583294 KANK3Q6NY19 840 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms