RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PBXIP1Q96AQ6 731 aa8.42□□□□□ -1.06
COPS3-217ENST00000583160 QTRT2Q9H974 415 aaKnown RBP8.42□□□□□ -1.06
COPS3-217ENST00000583160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.42□□□□□ -1.06
COPS3-217ENST00000583160 KLK14Q9P0G3 267 aa8.42□□□□□ -1.06
COPS3-217ENST00000583160 ELOA3CA0A087WX78 387 aaPredicted RBP8.41□□□□□ -1.06
COPS3-217ENST00000583160 ELOA3DA6NLF2 546 aaPredicted RBP8.41□□□□□ -1.06
COPS3-217ENST00000583160 FAM69CQ0P6D2 419 aa8.41□□□□□ -1.06
COPS3-217ENST00000583160 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
COPS3-217ENST00000583160 DGKZQ13574 1117 aa8.41□□□□□ -1.06
COPS3-217ENST00000583160 ELOA3BQ3SY89 546 aa8.41□□□□□ -1.06
COPS3-217ENST00000583160 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
COPS3-217ENST00000583160 RAB44Q7Z6P3 723 aaPredicted RBP8.41□□□□□ -1.06
COPS3-217ENST00000583160 ELOA3Q8NG57 546 aa8.41□□□□□ -1.06
COPS3-217ENST00000583160 DCAF5Q96JK2 942 aa8.41□□□□□ -1.06
COPS3-217ENST00000583160 ALAS2P22557 587 aa8.4□□□□□ -1.06
COPS3-217ENST00000583160 FKBP5Q13451 457 aaPredicted RBP8.4□□□□□ -1.06
COPS3-217ENST00000583160 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
COPS3-217ENST00000583160 MYO19Q96H55 970 aa8.4□□□□□ -1.06
COPS3-217ENST00000583160 DMGDHQ9UI17 866 aaKnown RBP8.4□□□□□ -1.06
COPS3-217ENST00000583160 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
COPS3-217ENST00000583160 DGKGP49619 791 aa8.39□□□□□ -1.07
COPS3-217ENST00000583160 C11orf91Q3C1V1 193 aa8.39□□□□□ -1.07
COPS3-217ENST00000583160 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
COPS3-217ENST00000583160 TNFRSF25Q93038 417 aa8.39□□□□□ -1.07
COPS3-217ENST00000583160 BHMTQ93088 406 aa8.39□□□□□ -1.07
COPS3-217ENST00000583160 MDFIQ99750 246 aa8.39□□□□□ -1.07
COPS3-217ENST00000583160 OCLNQ16625 522 aa8.38□□□□□ -1.07
COPS3-217ENST00000583160 SUV39H2Q9H5I1 410 aa8.38□□□□□ -1.07
COPS3-217ENST00000583160 LRFN2Q9ULH4 789 aa8.38□□□□□ -1.07
COPS3-217ENST00000583160 PIK3R2O00459 728 aa8.37□□□□□ -1.07
COPS3-217ENST00000583160 GNB5O14775 395 aa8.37□□□□□ -1.07
COPS3-217ENST00000583160 IDH3AP50213 366 aa8.37□□□□□ -1.07
COPS3-217ENST00000583160 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
COPS3-217ENST00000583160 MICAL2O94851 1124 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 EPB42P16452 691 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 COL8A1P27658 744 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 INPP5BP32019 993 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 COX20Q5RI15 118 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 GPAT2Q6NUI2 795 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 IFT43Q96FT9 208 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 GSX2Q9BZM3 304 aa8.36□□□□□ -1.07
COPS3-217ENST00000583160 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
COPS3-217ENST00000583160 ADH7P40394 386 aa8.35□□□□□ -1.07
COPS3-217ENST00000583160 CCINQ13939 588 aa8.35□□□□□ -1.07
COPS3-217ENST00000583160 PNMA5Q96PV4 448 aa8.35□□□□□ -1.07
COPS3-217ENST00000583160 EFCC1Q9HA90 598 aa8.35□□□□□ -1.07
COPS3-217ENST00000583160 CXXC1Q9P0U4 656 aaPredicted RBP8.35□□□□□ -1.07
COPS3-217ENST00000583160 ARSDP51689 593 aa8.34□□□□□ -1.07
COPS3-217ENST00000583160 PLA2G4EQ3MJ16 856 aa8.34□□□□□ -1.07
COPS3-217ENST00000583160 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.07
COPS3-217ENST00000583160 IGFLR1Q9H665 355 aa8.34□□□□□ -1.07
COPS3-217ENST00000583160 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
COPS3-217ENST00000583160 KRBA1A5PL33 1030 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 TBC1D8BQ0IIM8 1120 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 CAPN12Q6ZSI9 719 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 ALYREFQ86V81 257 aaKnown RBP8.33□□□□□ -1.08
COPS3-217ENST00000583160 COL26A1Q96A83 441 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 MKNK1Q9BUB5 465 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 UBE2OQ9C0C9 1292 aaKnown RBP8.33□□□□□ -1.08
COPS3-217ENST00000583160 SAP130Q9H0E3 1048 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 STARD13Q9Y3M8 1113 aa8.33□□□□□ -1.08
COPS3-217ENST00000583160 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.33□□□□□ -1.08
COPS3-217ENST00000583160 M0R082 166 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 OPLAHO14841 1288 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 IGHA1P01876 353 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 NFKB1P19838 968 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 TREML1Q86YW5 311 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 ZNF417Q8TAU3 575 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 TRIM11Q96F44 468 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 ZNF587Q96SQ5 575 aaPredicted RBP8.32□□□□□ -1.08
COPS3-217ENST00000583160 NOP53Q9NZM5 478 aaKnown RBP8.32□□□□□ -1.08
COPS3-217ENST00000583160 SLAIN2Q9P270 581 aa8.32□□□□□ -1.08
COPS3-217ENST00000583160 ALBP02768 609 aa8.31□□□□□ -1.08
COPS3-217ENST00000583160 ITGB2P05107 769 aa8.31□□□□□ -1.08
COPS3-217ENST00000583160 NAA30Q147X3 362 aaPredicted RBP8.31□□□□□ -1.08
COPS3-217ENST00000583160 MICALL1Q8N3F8 863 aa8.31□□□□□ -1.08
COPS3-217ENST00000583160 PLVAPQ9BX97 442 aa8.31□□□□□ -1.08
COPS3-217ENST00000583160 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
COPS3-217ENST00000583160 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
COPS3-217ENST00000583160 PTCD1O75127 700 aaKnown RBP8.3□□□□□ -1.08
COPS3-217ENST00000583160 BRD2P25440 801 aaKnown RBP8.3□□□□□ -1.08
COPS3-217ENST00000583160 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
COPS3-217ENST00000583160 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
COPS3-217ENST00000583160 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
COPS3-217ENST00000583160 C11orf16Q9NQ32 467 aa8.3□□□□□ -1.08
COPS3-217ENST00000583160 DNAJB12Q9NXW2 375 aaKnown RBP8.3□□□□□ -1.08
COPS3-217ENST00000583160 SASH3O75995 380 aa8.29□□□□□ -1.08
COPS3-217ENST00000583160 ATP2B4P23634 1241 aa8.29□□□□□ -1.08
COPS3-217ENST00000583160 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
COPS3-217ENST00000583160 ETFBKMTQ8IXQ9 262 aa8.29□□□□□ -1.08
COPS3-217ENST00000583160 RGL4Q8IZJ4 473 aa8.29□□□□□ -1.08
COPS3-217ENST00000583160 CMTR1Q8N1G2 835 aaKnown RBP8.29□□□□□ -1.08
COPS3-217ENST00000583160 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
COPS3-217ENST00000583160 MSTNO14793 375 aa8.28□□□□□ -1.08
COPS3-217ENST00000583160 PPP1R15AO75807 674 aaPredicted RBP8.28□□□□□ -1.08
COPS3-217ENST00000583160 COL9A3Q14050 684 aaPredicted RBP8.28□□□□□ -1.08
COPS3-217ENST00000583160 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
COPS3-217ENST00000583160 ZFATQ9P243 1243 aa8.28□□□□□ -1.08
COPS3-217ENST00000583160 TNFRSF10BO14763 440 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms