RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 IL2RBP14784 551 aa16.49■□□□□ 0.23
SRSF1-205ENST00000582730 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
SRSF1-205ENST00000582730 FSD1Q9BTV5 496 aa16.49■□□□□ 0.23
SRSF1-205ENST00000582730 A1BGP04217 495 aa16.48■□□□□ 0.23
SRSF1-205ENST00000582730 CPA1P15085 419 aa16.48■□□□□ 0.23
SRSF1-205ENST00000582730 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
SRSF1-205ENST00000582730 ZDHHC9Q9Y397 364 aa16.48■□□□□ 0.23
SRSF1-205ENST00000582730 CRYBG1Q9Y4K1 1723 aa16.48■□□□□ 0.23
SRSF1-205ENST00000582730 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
SRSF1-205ENST00000582730 PTH1RQ03431 593 aa16.48■□□□□ 0.23
SRSF1-205ENST00000582730 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
SRSF1-205ENST00000582730 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
SRSF1-205ENST00000582730 FAM227BQ96M60 508 aa16.47■□□□□ 0.23
SRSF1-205ENST00000582730 CASTP20810 708 aaKnown RBP16.47■□□□□ 0.23
SRSF1-205ENST00000582730 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
SRSF1-205ENST00000582730 SOS2Q07890 1332 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-205ENST00000582730 NBPF26B4DH59 902 aa16.46■□□□□ 0.23
SRSF1-205ENST00000582730 NBPF14Q5TI25 921 aa16.46■□□□□ 0.23
SRSF1-205ENST00000582730 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.23
SRSF1-205ENST00000582730 NBPF15Q8N660 670 aa16.46■□□□□ 0.23
SRSF1-205ENST00000582730 MRC1P22897 1456 aa16.46■□□□□ 0.23
SRSF1-205ENST00000582730 CLEC17AQ6ZS10 378 aa16.46■□□□□ 0.23
SRSF1-205ENST00000582730 TFCP2Q12800 502 aa16.45■□□□□ 0.22
SRSF1-205ENST00000582730 NMIQ13287 307 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-205ENST00000582730 CAVIN1Q6NZI2 390 aaKnown RBP16.45■□□□□ 0.22
SRSF1-205ENST00000582730 EDC3Q96F86 508 aaKnown RBP16.45■□□□□ 0.22
SRSF1-205ENST00000582730 EPB41L2O43491 1005 aaKnown RBP16.45■□□□□ 0.22
SRSF1-205ENST00000582730 CUL4AQ13619 759 aa16.45■□□□□ 0.22
SRSF1-205ENST00000582730 LMBR1LQ6UX01 489 aa16.45■□□□□ 0.22
SRSF1-205ENST00000582730 JAKMIP1Q96N16 626 aaKnown RBP16.45■□□□□ 0.22
SRSF1-205ENST00000582730 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-205ENST00000582730 AK2P54819 239 aa16.45■□□□□ 0.22
SRSF1-205ENST00000582730 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
SRSF1-205ENST00000582730 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
SRSF1-205ENST00000582730 PKD1L3Q7Z443 1732 aa16.44■□□□□ 0.22
SRSF1-205ENST00000582730 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
SRSF1-205ENST00000582730 ABCC6O95255 1503 aa16.44■□□□□ 0.22
SRSF1-205ENST00000582730 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
SRSF1-205ENST00000582730 CARD10Q9BWT7 1032 aa16.44■□□□□ 0.22
SRSF1-205ENST00000582730 ERVV-2B6SEH9 535 aa16.43■□□□□ 0.22
SRSF1-205ENST00000582730 LMBRD1Q9NUN5 540 aa16.43■□□□□ 0.22
SRSF1-205ENST00000582730 DTNBO60941 627 aa16.43■□□□□ 0.22
SRSF1-205ENST00000582730 DNAJC2Q99543 621 aaKnown RBP16.43■□□□□ 0.22
SRSF1-205ENST00000582730 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
SRSF1-205ENST00000582730 INTS4Q96HW7 963 aaKnown RBP16.43■□□□□ 0.22
SRSF1-205ENST00000582730 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 A0A0D9SFI3 127 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-205ENST00000582730 ADCK5Q3MIX3 580 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 TNNI3KQ59H18 835 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-205ENST00000582730 DBNLQ9UJU6 430 aaKnown RBP16.42■□□□□ 0.22
SRSF1-205ENST00000582730 RBM8AQ9Y5S9 174 aaKnown RBP16.42■□□□□ 0.22
SRSF1-205ENST00000582730 FPGT-TNNI3KV9GXZ4 949 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 HIP1O00291 1037 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 TPM2P07951 284 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
SRSF1-205ENST00000582730 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
SRSF1-205ENST00000582730 TPRNQ4KMQ1 711 aa16.41■□□□□ 0.22
SRSF1-205ENST00000582730 AFDNP55196 1824 aaKnown RBP16.41■□□□□ 0.22
SRSF1-205ENST00000582730 NEUROD6Q96NK8 337 aa16.41■□□□□ 0.22
SRSF1-205ENST00000582730 DBNDD2Q9BQY9 259 aa16.41■□□□□ 0.22
SRSF1-205ENST00000582730 BRD1O95696 1058 aa16.41■□□□□ 0.22
SRSF1-205ENST00000582730 PDRG1Q9NUG6 133 aa16.41■□□□□ 0.22
SRSF1-205ENST00000582730 LIMCH1Q9UPQ0 1083 aa16.41■□□□□ 0.22
SRSF1-205ENST00000582730 RUFY3Q7L099 469 aa16.4■□□□□ 0.22
SRSF1-205ENST00000582730 RBM27Q9P2N5 1060 aaKnown RBP16.4■□□□□ 0.22
SRSF1-205ENST00000582730 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
SRSF1-205ENST00000582730 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
SRSF1-205ENST00000582730 RABL6Q3YEC7 729 aaPredicted RBP16.4■□□□□ 0.22
SRSF1-205ENST00000582730 IL17RAQ96F46 866 aa16.4■□□□□ 0.22
SRSF1-205ENST00000582730 TTC14Q96N46 770 aa16.4■□□□□ 0.22
SRSF1-205ENST00000582730 BTG4Q9NY30 223 aa16.4■□□□□ 0.22
SRSF1-205ENST00000582730 CYP46A1Q9Y6A2 500 aa16.4■□□□□ 0.22
SRSF1-205ENST00000582730 PARP4Q9UKK3 1724 aaKnown RBP16.4■□□□□ 0.22
SRSF1-205ENST00000582730 CREB3L3Q68CJ9 461 aa16.39■□□□□ 0.21
SRSF1-205ENST00000582730 ARFGEF2Q9Y6D5 1785 aa16.39■□□□□ 0.21
SRSF1-205ENST00000582730 CCDC83Q8IWF9 413 aa16.39■□□□□ 0.21
SRSF1-205ENST00000582730 CCDC85AQ96PX6 553 aaPredicted RBP16.39■□□□□ 0.21
SRSF1-205ENST00000582730 GDPD2Q9HCC8 539 aa16.39■□□□□ 0.21
SRSF1-205ENST00000582730 A0A0G2JS52 829 aa16.38■□□□□ 0.21
SRSF1-205ENST00000582730 CASP7P55210 303 aa16.38■□□□□ 0.21
SRSF1-205ENST00000582730 DDX46Q7L014 1031 aaKnown RBP16.38■□□□□ 0.21
SRSF1-205ENST00000582730 SMC3Q9UQE7 1217 aa16.38■□□□□ 0.21
SRSF1-205ENST00000582730 LARGE1O95461 756 aa16.38■□□□□ 0.21
SRSF1-205ENST00000582730 ZNF589Q86UQ0 364 aaPredicted RBP16.38■□□□□ 0.21
SRSF1-205ENST00000582730 GPT2Q8TD30 523 aa16.38■□□□□ 0.21
SRSF1-205ENST00000582730 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
SRSF1-205ENST00000582730 TCEANC2Q96MN5 208 aa16.38■□□□□ 0.21
SRSF1-205ENST00000582730 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 NECTIN1Q15223 517 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 ASAP1Q9ULH1 1129 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 H7C1W4 665 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 CHGBP05060 677 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 NASPP49321 788 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-205ENST00000582730 FOXO4P98177 505 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-205ENST00000582730 ZSCAN23Q3MJ62 389 aa16.37■□□□□ 0.21
SRSF1-205ENST00000582730 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-205ENST00000582730 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms