RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
TRAPPC8-210ENST00000582513 GPT2Q8TD30 523 aa18.32■□□□□ 0.52
TRAPPC8-210ENST00000582513 POLR3GO15318 223 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC8-210ENST00000582513 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
TRAPPC8-210ENST00000582513 SYT10Q6XYQ8 523 aa18.31■□□□□ 0.52
TRAPPC8-210ENST00000582513 NBPF7P0C2Y1 421 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 ZNF445P59923 1031 aa18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 USP25Q9UHP3 1055 aa18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 NCBP1Q09161 790 aaKnown RBP18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 GTF3C6Q969F1 213 aa18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 CALR3Q96L12 384 aaKnown RBP18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 LARP6Q9BRS8 491 aaKnown RBP18.3■□□□□ 0.52
TRAPPC8-210ENST00000582513 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC8-210ENST00000582513 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
TRAPPC8-210ENST00000582513 SRGAP3O43295 1099 aa18.29■□□□□ 0.52
TRAPPC8-210ENST00000582513 DTNBO60941 627 aa18.29■□□□□ 0.52
TRAPPC8-210ENST00000582513 NBPF6Q5VWK0 638 aa18.29■□□□□ 0.52
TRAPPC8-210ENST00000582513 NBPF4Q96M43 638 aa18.29■□□□□ 0.52
TRAPPC8-210ENST00000582513 JRKLQ9Y4A0 524 aa18.29■□□□□ 0.52
TRAPPC8-210ENST00000582513 CASQ1P31415 396 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 KRBA2Q6ZNG9 492 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 LRRC59Q96AG4 307 aaKnown RBP18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 MCCP23508 829 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 PPP2R5AQ15172 486 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 SPC24Q8NBT2 197 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 SH3BP1Q9Y3L3 701 aa18.28■□□□□ 0.52
TRAPPC8-210ENST00000582513 PI4KAP2A4QPH2 592 aa18.27■□□□□ 0.52
TRAPPC8-210ENST00000582513 PI4KAP1Q8N8J0 262 aa18.27■□□□□ 0.52
TRAPPC8-210ENST00000582513 CCDC191Q8NCU4 936 aa18.27■□□□□ 0.52
TRAPPC8-210ENST00000582513 BIRC2Q13490 618 aa18.27■□□□□ 0.52
TRAPPC8-210ENST00000582513 MYO1CO00159 1063 aa18.27■□□□□ 0.51
TRAPPC8-210ENST00000582513 GUCY2CP25092 1073 aa18.27■□□□□ 0.51
TRAPPC8-210ENST00000582513 MAP2K1Q02750 393 aaPredicted RBP18.27■□□□□ 0.51
TRAPPC8-210ENST00000582513 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.51
TRAPPC8-210ENST00000582513 KIF18AQ8NI77 898 aa18.27■□□□□ 0.51
TRAPPC8-210ENST00000582513 GDPD2Q9HCC8 539 aa18.27■□□□□ 0.51
TRAPPC8-210ENST00000582513 SUFUQ9UMX1 484 aa18.27■□□□□ 0.51
TRAPPC8-210ENST00000582513 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC8-210ENST00000582513 C16orf45Q96MC5 204 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC8-210ENST00000582513 TMEM63CQ9P1W3 806 aa18.26■□□□□ 0.51
TRAPPC8-210ENST00000582513 NWD1Q149M9 1564 aa18.26■□□□□ 0.51
TRAPPC8-210ENST00000582513 TTLL5Q6EMB2 1281 aa18.25■□□□□ 0.51
TRAPPC8-210ENST00000582513 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
TRAPPC8-210ENST00000582513 SSH3Q8TE77 659 aa18.25■□□□□ 0.51
TRAPPC8-210ENST00000582513 STAP2Q9UGK3 403 aa18.25■□□□□ 0.51
TRAPPC8-210ENST00000582513 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
TRAPPC8-210ENST00000582513 FAM208AQ9UK61 1670 aaKnown RBP18.24■□□□□ 0.51
TRAPPC8-210ENST00000582513 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
TRAPPC8-210ENST00000582513 XRN1Q8IZH2 1706 aaKnown RBP18.24■□□□□ 0.51
TRAPPC8-210ENST00000582513 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
TRAPPC8-210ENST00000582513 CXorf56Q9H5V9 222 aa18.24■□□□□ 0.51
TRAPPC8-210ENST00000582513 LRCH2Q5VUJ6 765 aa18.23■□□□□ 0.51
TRAPPC8-210ENST00000582513 LCMT1Q9UIC8 334 aa18.23■□□□□ 0.51
TRAPPC8-210ENST00000582513 ESCO1Q5FWF5 840 aa18.23■□□□□ 0.51
TRAPPC8-210ENST00000582513 LRSAM1Q6UWE0 723 aa18.23■□□□□ 0.51
TRAPPC8-210ENST00000582513 SGSM3Q96HU1 749 aa18.23■□□□□ 0.51
TRAPPC8-210ENST00000582513 MORC2Q9Y6X9 1032 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC8-210ENST00000582513 TEFQ10587 303 aa18.22■□□□□ 0.51
TRAPPC8-210ENST00000582513 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC8-210ENST00000582513 CWC27Q6UX04 472 aaKnown RBP18.22■□□□□ 0.51
TRAPPC8-210ENST00000582513 DNAAF4Q8WXU2 420 aa18.22■□□□□ 0.51
TRAPPC8-210ENST00000582513 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
TRAPPC8-210ENST00000582513 ARHGAP23Q9P227 1491 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 CPA1P15085 419 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 PSME1Q06323 249 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 PI4K2BQ8TCG2 481 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 PRAMEF22A3QJZ6 481 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 BRD1O95696 1058 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 CCDC112Q8NEF3 446 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 SLIT1O75093 1534 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 CUL4AQ13619 759 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 BEND3Q5T5X7 828 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 IP6K1Q92551 441 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 TSPY26PQ9H489 355 aa18.21■□□□□ 0.51
TRAPPC8-210ENST00000582513 ARID4AP29374 1257 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 MCM2P49736 904 aa18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 TTC31Q49AM3 519 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 TEX35Q5T0J7 233 aa18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 PROSER3Q2NL68 480 aa18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 DDX54Q8TDD1 881 aaKnown RBP18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 PA2G4Q9UQ80 394 aaKnown RBP18.2■□□□□ 0.5
TRAPPC8-210ENST00000582513 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 ADCY5O95622 1261 aa18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 POLA2Q14181 598 aa18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 ANAPC15P60006 121 aa18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 PIK3R5Q8WYR1 880 aa18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 KIF1BPQ96EK5 621 aa18.19■□□□□ 0.5
TRAPPC8-210ENST00000582513 GADD45BO75293 160 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC8-210ENST00000582513 HSPA4P34932 840 aa18.18■□□□□ 0.5
TRAPPC8-210ENST00000582513 RAB11FIP3O75154 756 aa18.18■□□□□ 0.5
TRAPPC8-210ENST00000582513 CYP2C19P33261 490 aa18.18■□□□□ 0.5
TRAPPC8-210ENST00000582513 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms