RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 TRAF5O00463 557 aa11.5□□□□□ -0.57
PDLIM1P3-201ENST00000582370 CAMTA2O94983 1202 aa11.5□□□□□ -0.57
PDLIM1P3-201ENST00000582370 SCNN1DP51172 638 aa11.5□□□□□ -0.57
PDLIM1P3-201ENST00000582370 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
PDLIM1P3-201ENST00000582370 GJA3Q9Y6H8 435 aa11.5□□□□□ -0.57
PDLIM1P3-201ENST00000582370 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
PDLIM1P3-201ENST00000582370 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 NOGQ13253 232 aa11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 CIAPIN1Q6FI81 312 aa11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 PNISRQ8TF01 805 aaKnown RBP11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 GCC1Q96CN9 775 aa11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 COL3A1P02461 1466 aaPredicted RBP11.49□□□□□ -0.57
PDLIM1P3-201ENST00000582370 CELF2O95319 508 aaKnown RBP11.48□□□□□ -0.57
PDLIM1P3-201ENST00000582370 EPS15P42566 896 aa11.48□□□□□ -0.57
PDLIM1P3-201ENST00000582370 OLFM4Q6UX06 510 aa11.48□□□□□ -0.57
PDLIM1P3-201ENST00000582370 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
PDLIM1P3-201ENST00000582370 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
PDLIM1P3-201ENST00000582370 SAGE1Q9NXZ1 904 aa11.48□□□□□ -0.57
PDLIM1P3-201ENST00000582370 CC2D2BQ6DHV5 1058 aa11.47□□□□□ -0.57
PDLIM1P3-201ENST00000582370 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
PDLIM1P3-201ENST00000582370 ADARB2Q9NS39 739 aaKnown RBP11.47□□□□□ -0.57
PDLIM1P3-201ENST00000582370 ZNF652Q9Y2D9 606 aa11.47□□□□□ -0.57
PDLIM1P3-201ENST00000582370 IL13P35225 146 aa11.46□□□□□ -0.57
PDLIM1P3-201ENST00000582370 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
PDLIM1P3-201ENST00000582370 TPTE2Q6XPS3 522 aa11.46□□□□□ -0.57
PDLIM1P3-201ENST00000582370 ZNF496Q96IT1 587 aaPredicted RBP11.46□□□□□ -0.57
PDLIM1P3-201ENST00000582370 NUP98P52948 1817 aa11.45□□□□□ -0.58
PDLIM1P3-201ENST00000582370 RGL2O15211 777 aa11.45□□□□□ -0.58
PDLIM1P3-201ENST00000582370 ZNF790Q6PG37 636 aa11.45□□□□□ -0.58
PDLIM1P3-201ENST00000582370 LAMB4A4D0S4 1761 aa11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 CDHR2Q9BYE9 1310 aa11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 A1BGP04217 495 aa11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 U2AF1L5P0DN76 240 aaPredicted RBP11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 U2AF1Q01081 240 aaKnown RBP eCLIP11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 NBPF15Q8N660 670 aa11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 GPRC5DQ9NZD1 345 aa11.44□□□□□ -0.58
PDLIM1P3-201ENST00000582370 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 POLR2AP24928 1970 aaKnown RBP11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 U2SURPO15042 1029 aaKnown RBP11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 FMNL2Q96PY5 1086 aa11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 GLIS2Q9BZE0 524 aaPredicted RBP11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 PGAP2Q9UHJ9 254 aa11.43□□□□□ -0.58
PDLIM1P3-201ENST00000582370 MAPK8IP3Q9UPT6 1336 aa11.42□□□□□ -0.58
PDLIM1P3-201ENST00000582370 TEFQ10587 303 aa11.42□□□□□ -0.58
PDLIM1P3-201ENST00000582370 CRY2Q49AN0 593 aa11.42□□□□□ -0.58
PDLIM1P3-201ENST00000582370 CTU1Q7Z7A3 348 aaKnown RBP11.42□□□□□ -0.58
PDLIM1P3-201ENST00000582370 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
PDLIM1P3-201ENST00000582370 RUNDC1Q96C34 613 aa11.42□□□□□ -0.58
PDLIM1P3-201ENST00000582370 ZNF408Q9H9D4 720 aa11.42□□□□□ -0.58
PDLIM1P3-201ENST00000582370 HUNKP57058 714 aa11.41□□□□□ -0.58
PDLIM1P3-201ENST00000582370 CDC37L1Q7L3B6 337 aa11.41□□□□□ -0.58
PDLIM1P3-201ENST00000582370 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
PDLIM1P3-201ENST00000582370 ZIC5Q96T25 663 aa11.41□□□□□ -0.58
PDLIM1P3-201ENST00000582370 NIP7Q9Y221 180 aaKnown RBP eCLIP11.41□□□□□ -0.58
PDLIM1P3-201ENST00000582370 RBBP6Q7Z6E9 1792 aaKnown RBP11.41□□□□□ -0.58
PDLIM1P3-201ENST00000582370 HMOX1P09601 288 aa11.4□□□□□ -0.58
PDLIM1P3-201ENST00000582370 LMOD3Q0VAK6 560 aa11.4□□□□□ -0.58
PDLIM1P3-201ENST00000582370 VPS33BQ9H267 617 aa11.4□□□□□ -0.58
PDLIM1P3-201ENST00000582370 ADAMTS8Q9UP79 889 aa11.4□□□□□ -0.58
PDLIM1P3-201ENST00000582370 ABCC12Q96J65 1359 aa11.4□□□□□ -0.59
PDLIM1P3-201ENST00000582370 FAM155AB1AL88 458 aaPredicted RBP11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 GTF2E1P29083 439 aaPredicted RBP11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 PKN2Q16513 984 aaKnown RBP11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 HABP4Q5JVS0 413 aaKnown RBP11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 RGMBQ6NW40 437 aa11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 DDX60Q8IY21 1712 aaKnown RBP11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 NYXQ9GZU5 481 aa11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
PDLIM1P3-201ENST00000582370 TRPA1O75762 1119 aa11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 RPGRQ92834 1020 aaKnown RBP11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 RSPH6AQ9H0K4 717 aa11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 RNF186Q9NXI6 227 aa11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 CEMIPQ8WUJ3 1361 aa11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 IBTKQ9P2D0 1353 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1P3-201ENST00000582370 MKI67P46013 3256 aaKnown RBP11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 LAMB2P55268 1798 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 ANKRD36CQ5JPF3 1778 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 FAM177BA6PVY3 158 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 GNAT3A8MTJ3 354 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 HTATSF1O43719 755 aaKnown RBP11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 GMPSP49915 693 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 KIF23Q02241 960 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 CXCL9Q07325 125 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 IL17REQ8NFR9 667 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 ZNRF3Q9ULT6 936 aa11.37□□□□□ -0.59
PDLIM1P3-201ENST00000582370 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1P3-201ENST00000582370 PRKAR2BP31323 418 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms