RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TBC1D9BQ66K14 1250 aa8.54□□□□□ -1.04
TVP23B-210ENST00000582288 PRPF40BQ6NWY9 871 aaKnown RBP8.54□□□□□ -1.04
TVP23B-210ENST00000582288 C7orf43Q8WVR3 580 aa8.54□□□□□ -1.04
TVP23B-210ENST00000582288 FAM212AQ96EL1 285 aa8.54□□□□□ -1.04
TVP23B-210ENST00000582288 BEGAINQ9BUH8 593 aa8.54□□□□□ -1.04
TVP23B-210ENST00000582288 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
TVP23B-210ENST00000582288 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 SCN7AQ01118 1682 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 FZD9O00144 591 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 IL6STP40189 918 aaPredicted RBP8.53□□□□□ -1.04
TVP23B-210ENST00000582288 ST5P78524 1137 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
TVP23B-210ENST00000582288 CCDC93Q567U6 631 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 SULT6B1Q6IMI4 303 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 AEBP1Q8IUX7 1158 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 RTKN2Q8IZC4 609 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 GPC2Q8N158 579 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 SETDB2Q96T68 719 aa8.53□□□□□ -1.04
TVP23B-210ENST00000582288 KLRG2A4D1S0 409 aaPredicted RBP8.52□□□□□ -1.05
TVP23B-210ENST00000582288 RGL2O15211 777 aa8.52□□□□□ -1.05
TVP23B-210ENST00000582288 RNMTO43148 476 aaKnown RBP8.52□□□□□ -1.05
TVP23B-210ENST00000582288 CANXP27824 592 aaKnown RBP8.52□□□□□ -1.05
TVP23B-210ENST00000582288 EAPPQ56P03 285 aaPredicted RBP8.52□□□□□ -1.05
TVP23B-210ENST00000582288 BICDL1Q6ZP65 573 aa8.52□□□□□ -1.05
TVP23B-210ENST00000582288 CNBD1Q8NA66 436 aa8.52□□□□□ -1.05
TVP23B-210ENST00000582288 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
TVP23B-210ENST00000582288 DDX21Q9NR30 783 aaKnown RBP eCLIP8.52□□□□□ -1.05
TVP23B-210ENST00000582288 ABT1Q9ULW3 272 aaKnown RBP8.52□□□□□ -1.05
TVP23B-210ENST00000582288 SLX4Q8IY92 1834 aa8.52□□□□□ -1.05
TVP23B-210ENST00000582288 NPR1P16066 1061 aa8.51□□□□□ -1.05
TVP23B-210ENST00000582288 IL13P35225 146 aa8.51□□□□□ -1.05
TVP23B-210ENST00000582288 TNNT2P45379 298 aaPredicted RBP8.51□□□□□ -1.05
TVP23B-210ENST00000582288 SLC39A6Q13433 755 aa8.51□□□□□ -1.05
TVP23B-210ENST00000582288 CLEC4GQ6UXB4 293 aa8.51□□□□□ -1.05
TVP23B-210ENST00000582288 HHIPL1Q96JK4 782 aa8.51□□□□□ -1.05
TVP23B-210ENST00000582288 CAPNS2Q96L46 248 aa8.51□□□□□ -1.05
TVP23B-210ENST00000582288 GPR101Q96P66 508 aaPredicted RBP8.51□□□□□ -1.05
TVP23B-210ENST00000582288 ZNF541Q9H0D2 1346 aa8.51□□□□□ -1.05
TVP23B-210ENST00000582288 GRIPAP1Q4V328 841 aa8.5□□□□□ -1.05
TVP23B-210ENST00000582288 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
TVP23B-210ENST00000582288 TTC5Q8N0Z6 440 aa8.5□□□□□ -1.05
TVP23B-210ENST00000582288 PLCD3Q8N3E9 789 aa8.5□□□□□ -1.05
TVP23B-210ENST00000582288 HEG1Q9ULI3 1381 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 NPHP1O15259 732 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 CAMTA2O94983 1202 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 ALDH1B1P30837 517 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 IARSP41252 1262 aaKnown RBP8.49□□□□□ -1.05
TVP23B-210ENST00000582288 BRPF1P55201 1214 aaPredicted RBP8.49□□□□□ -1.05
TVP23B-210ENST00000582288 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 USP50Q70EL3 339 aaPredicted RBP8.49□□□□□ -1.05
TVP23B-210ENST00000582288 NPM2Q86SE8 214 aaKnown RBP8.49□□□□□ -1.05
TVP23B-210ENST00000582288 ZNF710Q8N1W2 664 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 PDCD7Q8N8D1 485 aaKnown RBP8.49□□□□□ -1.05
TVP23B-210ENST00000582288 PSMD1Q99460 953 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 TBC1D2BQ9UPU7 963 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 TLL2Q9Y6L7 1015 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 RNF123Q5XPI4 1314 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
TVP23B-210ENST00000582288 HOXB1P14653 301 aaPredicted RBP8.48□□□□□ -1.05
TVP23B-210ENST00000582288 LMOD1P29536 600 aaPredicted RBP8.48□□□□□ -1.05
TVP23B-210ENST00000582288 NUBP1P53384 320 aa8.48□□□□□ -1.05
TVP23B-210ENST00000582288 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
TVP23B-210ENST00000582288 CST9Q5W186 159 aa8.48□□□□□ -1.05
TVP23B-210ENST00000582288 TPTE2Q6XPS3 522 aa8.48□□□□□ -1.05
TVP23B-210ENST00000582288 JDP2Q8WYK2 163 aa8.48□□□□□ -1.05
TVP23B-210ENST00000582288 MCOLN1Q9GZU1 580 aa8.48□□□□□ -1.05
TVP23B-210ENST00000582288 ZNF277Q9NRM2 450 aaPredicted RBP8.48□□□□□ -1.05
TVP23B-210ENST00000582288 BCORQ6W2J9 1755 aa8.48□□□□□ -1.05
TVP23B-210ENST00000582288 SNED1Q8TER0 1413 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 EIF6P56537 245 aaKnown RBP8.47□□□□□ -1.05
TVP23B-210ENST00000582288 MTHFSDQ2M296 383 aaKnown RBP8.47□□□□□ -1.05
TVP23B-210ENST00000582288 CYP4F22Q6NT55 531 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 ZNF790Q6PG37 636 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 MORC1Q86VD1 984 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 NBPF5PQ86XG9 351 aaPredicted RBP8.47□□□□□ -1.05
TVP23B-210ENST00000582288 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 TIMELESSQ9UNS1 1208 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 ZNF652Q9Y2D9 606 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 CACNA1SQ13698 1873 aa8.47□□□□□ -1.05
TVP23B-210ENST00000582288 SCNN1DP51172 638 aa8.46□□□□□ -1.06
TVP23B-210ENST00000582288 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
TVP23B-210ENST00000582288 SAPCD2Q86UD0 394 aa8.46□□□□□ -1.06
TVP23B-210ENST00000582288 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.06
TVP23B-210ENST00000582288 SYNE4Q8N205 404 aa8.46□□□□□ -1.06
TVP23B-210ENST00000582288 ZNF496Q96IT1 587 aaPredicted RBP8.46□□□□□ -1.06
TVP23B-210ENST00000582288 FMNL2Q96PY5 1086 aa8.46□□□□□ -1.06
TVP23B-210ENST00000582288 VPS33BQ9H267 617 aa8.46□□□□□ -1.06
TVP23B-210ENST00000582288 PANK3Q9H999 370 aa8.46□□□□□ -1.06
TVP23B-210ENST00000582288 TRPM7Q96QT4 1865 aa8.45□□□□□ -1.06
TVP23B-210ENST00000582288 TEFQ10587 303 aa8.45□□□□□ -1.06
TVP23B-210ENST00000582288 DGKZQ13574 1117 aa8.45□□□□□ -1.06
TVP23B-210ENST00000582288 PRPF38BQ5VTL8 546 aaKnown RBP8.45□□□□□ -1.06
TVP23B-210ENST00000582288 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
TVP23B-210ENST00000582288 PGAP2Q9UHJ9 254 aa8.45□□□□□ -1.06
TVP23B-210ENST00000582288 SIPA1L3O60292 1781 aaPredicted RBP8.44□□□□□ -1.06
TVP23B-210ENST00000582288 A1BGP04217 495 aa8.44□□□□□ -1.06
TVP23B-210ENST00000582288 NOGQ13253 232 aa8.44□□□□□ -1.06
TVP23B-210ENST00000582288 CRY2Q49AN0 593 aa8.44□□□□□ -1.06
TVP23B-210ENST00000582288 ZC3H15Q8WU90 426 aaKnown RBP8.44□□□□□ -1.06
TVP23B-210ENST00000582288 CFAP44Q96MT7 982 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms