RNA–Protein interactions for RNA: ENST00000582276.1

PGAP3-208, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-208ENST00000582276 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
PGAP3-208ENST00000582276 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
PGAP3-208ENST00000582276 TRMT112Q9UI30 125 aaKnown RBP23.24■■□□□ 1.31
PGAP3-208ENST00000582276 IBTKQ9P2D0 1353 aaPredicted RBP23.24■■□□□ 1.31
PGAP3-208ENST00000582276 KCNA3P22001 575 aa23.23■■□□□ 1.31
PGAP3-208ENST00000582276 NEXNQ0ZGT2 675 aa23.23■■□□□ 1.31
PGAP3-208ENST00000582276 PIM2Q9P1W9 311 aa23.23■■□□□ 1.31
PGAP3-208ENST00000582276 ALDH1L2Q3SY69 923 aa23.22■■□□□ 1.31
PGAP3-208ENST00000582276 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
PGAP3-208ENST00000582276 ABCC12Q96J65 1359 aa23.22■■□□□ 1.31
PGAP3-208ENST00000582276 YBX3P16989 372 aaKnown RBP eCLIP23.21■■□□□ 1.31
PGAP3-208ENST00000582276 TRIM28Q13263 835 aaKnown RBP23.21■■□□□ 1.31
PGAP3-208ENST00000582276 DNAAF4Q8WXU2 420 aa23.21■■□□□ 1.31
PGAP3-208ENST00000582276 ZNF622Q969S3 477 aaKnown RBP eCLIP23.21■■□□□ 1.31
PGAP3-208ENST00000582276 PDZRN3Q9UPQ7 1066 aa23.21■■□□□ 1.31
PGAP3-208ENST00000582276 BCS1LQ9Y276 419 aa23.21■■□□□ 1.31
PGAP3-208ENST00000582276 F6X3S4 739 aa23.2■■□□□ 1.3
PGAP3-208ENST00000582276 SYNE4Q8N205 404 aa23.2■■□□□ 1.3
PGAP3-208ENST00000582276 RNF123Q5XPI4 1314 aa23.19■■□□□ 1.3
PGAP3-208ENST00000582276 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
PGAP3-208ENST00000582276 DALRD3Q5D0E6 543 aaKnown RBP23.19■■□□□ 1.3
PGAP3-208ENST00000582276 RTL5Q5HYW3 569 aaPredicted RBP23.19■■□□□ 1.3
PGAP3-208ENST00000582276 CCDC191Q8NCU4 936 aa23.19■■□□□ 1.3
PGAP3-208ENST00000582276 FAM89AQ96GI7 184 aa23.19■■□□□ 1.3
PGAP3-208ENST00000582276 YTHDC1Q96MU7 727 aaKnown RBP23.19■■□□□ 1.3
PGAP3-208ENST00000582276 CWC25Q9NXE8 425 aaPredicted RBP23.19■■□□□ 1.3
PGAP3-208ENST00000582276 IGKV5-2P06315 115 aa23.18■■□□□ 1.3
PGAP3-208ENST00000582276 SRGNP10124 158 aa23.17■■□□□ 1.3
PGAP3-208ENST00000582276 HCLS1P14317 486 aaPredicted RBP23.17■■□□□ 1.3
PGAP3-208ENST00000582276 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
PGAP3-208ENST00000582276 CWF19L2Q2TBE0 894 aaKnown RBP23.17■■□□□ 1.3
PGAP3-208ENST00000582276 COL11A2P13942 1736 aaPredicted RBP23.16■■□□□ 1.3
PGAP3-208ENST00000582276 BRCA1P38398 1863 aaKnown RBP23.16■■□□□ 1.3
PGAP3-208ENST00000582276 KLRG2A4D1S0 409 aaPredicted RBP23.16■■□□□ 1.3
PGAP3-208ENST00000582276 SLC10A5Q5PT55 438 aa23.16■■□□□ 1.3
PGAP3-208ENST00000582276 TTLL6Q8N841 843 aa23.16■■□□□ 1.3
PGAP3-208ENST00000582276 JARID2Q92833 1246 aaPredicted RBP23.16■■□□□ 1.3
PGAP3-208ENST00000582276 MASTLQ96GX5 879 aa23.16■■□□□ 1.3
PGAP3-208ENST00000582276 NLRP3Q96P20 1036 aa23.16■■□□□ 1.3
PGAP3-208ENST00000582276 TNRC6CQ9HCJ0 1690 aaKnown RBP23.16■■□□□ 1.3
PGAP3-208ENST00000582276 PTPRCP08575 1304 aa23.15■■□□□ 1.3
PGAP3-208ENST00000582276 DLEC1Q9Y238 1755 aa23.15■■□□□ 1.3
PGAP3-208ENST00000582276 NEURL1BA8MQ27 555 aa23.15■■□□□ 1.3
PGAP3-208ENST00000582276 GRIN3BO60391 1043 aa23.15■■□□□ 1.3
PGAP3-208ENST00000582276 STYK1Q6J9G0 422 aa23.15■■□□□ 1.3
PGAP3-208ENST00000582276 SLC4A10Q6U841 1118 aa23.15■■□□□ 1.3
PGAP3-208ENST00000582276 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
PGAP3-208ENST00000582276 NPR1P16066 1061 aa23.14■■□□□ 1.29
PGAP3-208ENST00000582276 C3orf67Q6ZVT6 689 aa23.14■■□□□ 1.29
PGAP3-208ENST00000582276 LINS1Q8NG48 757 aa23.14■■□□□ 1.29
PGAP3-208ENST00000582276 IRS4O14654 1257 aaPredicted RBP23.13■■□□□ 1.29
PGAP3-208ENST00000582276 PCCAP05165 728 aaPredicted RBP23.13■■□□□ 1.29
PGAP3-208ENST00000582276 YY1P25490 414 aa23.13■■□□□ 1.29
PGAP3-208ENST00000582276 RPGRQ92834 1020 aaKnown RBP23.13■■□□□ 1.29
PGAP3-208ENST00000582276 CNKSR1Q969H4 720 aa23.13■■□□□ 1.29
PGAP3-208ENST00000582276 NOB1Q9ULX3 412 aaKnown RBP23.13■■□□□ 1.29
PGAP3-208ENST00000582276 RIC1Q4ADV7 1423 aa23.13■■□□□ 1.29
PGAP3-208ENST00000582276 CRY2Q49AN0 593 aa23.12■■□□□ 1.29
PGAP3-208ENST00000582276 BEND3Q5T5X7 828 aa23.12■■□□□ 1.29
PGAP3-208ENST00000582276 ZNF219Q9P2Y4 722 aaPredicted RBP23.12■■□□□ 1.29
PGAP3-208ENST00000582276 GCKRQ14397 625 aa23.11■■□□□ 1.29
PGAP3-208ENST00000582276 BCAR3O75815 825 aa23.1■■□□□ 1.29
PGAP3-208ENST00000582276 BRPF1P55201 1214 aaPredicted RBP23.1■■□□□ 1.29
PGAP3-208ENST00000582276 RBM17Q96I25 401 aaKnown RBP23.1■■□□□ 1.29
PGAP3-208ENST00000582276 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
PGAP3-208ENST00000582276 HSP90B1P14625 803 aaKnown RBP23.09■■□□□ 1.29
PGAP3-208ENST00000582276 ALDH1B1P30837 517 aa23.09■■□□□ 1.29
PGAP3-208ENST00000582276 PRPF40BQ6NWY9 871 aaKnown RBP23.09■■□□□ 1.29
PGAP3-208ENST00000582276 ARHGAP27Q6ZUM4 889 aa23.09■■□□□ 1.29
PGAP3-208ENST00000582276 UBE3BQ7Z3V4 1068 aa23.09■■□□□ 1.29
PGAP3-208ENST00000582276 SRCIN1Q9C0H9 1055 aa23.09■■□□□ 1.29
PGAP3-208ENST00000582276 KIF16BQ96L93 1317 aa23.08■■□□□ 1.29
PGAP3-208ENST00000582276 DDX60Q8IY21 1712 aaKnown RBP23.08■■□□□ 1.29
PGAP3-208ENST00000582276 ARFGEF1Q9Y6D6 1849 aa23.08■■□□□ 1.28
PGAP3-208ENST00000582276 GOLGB1Q14789 3259 aaKnown RBP23.07■■□□□ 1.28
PGAP3-208ENST00000582276 LAMB2P55268 1798 aa23.07■■□□□ 1.28
PGAP3-208ENST00000582276 H7C1W4 665 aa23.07■■□□□ 1.28
PGAP3-208ENST00000582276 C21orf2O43822 256 aa23.07■■□□□ 1.28
PGAP3-208ENST00000582276 HOXA10P31260 410 aaPredicted RBP23.07■■□□□ 1.28
PGAP3-208ENST00000582276 FRAT1Q92837 279 aaPredicted RBP23.07■■□□□ 1.28
PGAP3-208ENST00000582276 UTRNP46939 3433 aa23.07■■□□□ 1.28
PGAP3-208ENST00000582276 SLX4Q8IY92 1834 aa23.06■■□□□ 1.28
PGAP3-208ENST00000582276 PDE8AO60658 829 aa23.06■■□□□ 1.28
PGAP3-208ENST00000582276 ALDH1L1O75891 902 aa23.06■■□□□ 1.28
PGAP3-208ENST00000582276 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
PGAP3-208ENST00000582276 CDHR2Q9BYE9 1310 aa23.06■■□□□ 1.28
PGAP3-208ENST00000582276 DDX46Q7L014 1031 aaKnown RBP23.05■■□□□ 1.28
PGAP3-208ENST00000582276 CRAMP1Q96RY5 1269 aa23.05■■□□□ 1.28
PGAP3-208ENST00000582276 C9orf78Q9NZ63 289 aaPredicted RBP23.05■■□□□ 1.28
PGAP3-208ENST00000582276 IPO8O15397 1037 aaKnown RBP23.04■■□□□ 1.28
PGAP3-208ENST00000582276 SF3B3Q15393 1217 aaKnown RBP23.04■■□□□ 1.28
PGAP3-208ENST00000582276 ARHGAP45Q92619 1136 aa23.03■■□□□ 1.28
PGAP3-208ENST00000582276 CCDC85AQ96PX6 553 aaPredicted RBP23.03■■□□□ 1.28
PGAP3-208ENST00000582276 ABCC4O15439 1325 aa23.03■■□□□ 1.28
PGAP3-208ENST00000582276 GRM8O00222 908 aa23.02■■□□□ 1.28
PGAP3-208ENST00000582276 CASP7P55210 303 aa23.01■■□□□ 1.27
PGAP3-208ENST00000582276 CCDC152Q4G0S7 254 aa23.01■■□□□ 1.27
PGAP3-208ENST00000582276 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
PGAP3-208ENST00000582276 CCT4P50991 539 aaKnown RBP23■■□□□ 1.27
PGAP3-208ENST00000582276 CTSWP56202 376 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms