RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 SUSD4Q5VX71 490 aa13.29□□□□□ -0.28
TOP3A-212ENST00000582122 STYK1Q6J9G0 422 aa13.29□□□□□ -0.28
TOP3A-212ENST00000582122 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
TOP3A-212ENST00000582122 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
TOP3A-212ENST00000582122 CNKSR1Q969H4 720 aa13.29□□□□□ -0.28
TOP3A-212ENST00000582122 ISCA1Q9BUE6 129 aa13.29□□□□□ -0.28
TOP3A-212ENST00000582122 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-212ENST00000582122 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 NTSR2O95665 410 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 NPR1P16066 1061 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 MASTLQ96GX5 879 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 TRMT112Q9UI30 125 aaKnown RBP13.28□□□□□ -0.28
TOP3A-212ENST00000582122 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 PTPRCP08575 1304 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 UBN2Q6ZU65 1347 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 SH3TC1Q8TE82 1336 aa13.28□□□□□ -0.28
TOP3A-212ENST00000582122 FAM177BA6PVY3 158 aa13.27□□□□□ -0.29
TOP3A-212ENST00000582122 KIF3CO14782 793 aa13.27□□□□□ -0.29
TOP3A-212ENST00000582122 ALDH1B1P30837 517 aa13.27□□□□□ -0.29
TOP3A-212ENST00000582122 APLP1P51693 650 aa13.27□□□□□ -0.29
TOP3A-212ENST00000582122 SOGA3Q5TF21 947 aa13.27□□□□□ -0.29
TOP3A-212ENST00000582122 NLRP3Q96P20 1036 aa13.27□□□□□ -0.29
TOP3A-212ENST00000582122 CWC25Q9NXE8 425 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-212ENST00000582122 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
TOP3A-212ENST00000582122 SRGNP10124 158 aa13.26□□□□□ -0.29
TOP3A-212ENST00000582122 KCNA3P22001 575 aa13.26□□□□□ -0.29
TOP3A-212ENST00000582122 CHRNA5P30532 468 aa13.26□□□□□ -0.29
TOP3A-212ENST00000582122 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-212ENST00000582122 ZBTB38Q8NAP3 1195 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-212ENST00000582122 DNAAF4Q8WXU2 420 aa13.26□□□□□ -0.29
TOP3A-212ENST00000582122 MYD88Q99836 296 aa13.26□□□□□ -0.29
TOP3A-212ENST00000582122 BCS1LQ9Y276 419 aa13.26□□□□□ -0.29
TOP3A-212ENST00000582122 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
TOP3A-212ENST00000582122 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
TOP3A-212ENST00000582122 ERFEQ4G0M1 354 aa13.25□□□□□ -0.29
TOP3A-212ENST00000582122 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
TOP3A-212ENST00000582122 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
TOP3A-212ENST00000582122 LINS1Q8NG48 757 aa13.25□□□□□ -0.29
TOP3A-212ENST00000582122 RPGRQ92834 1020 aaKnown RBP13.25□□□□□ -0.29
TOP3A-212ENST00000582122 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
TOP3A-212ENST00000582122 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
TOP3A-212ENST00000582122 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
TOP3A-212ENST00000582122 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
TOP3A-212ENST00000582122 PCCAP05165 728 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-212ENST00000582122 G2E3Q7L622 706 aa13.24□□□□□ -0.29
TOP3A-212ENST00000582122 TMX4Q9H1E5 349 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-212ENST00000582122 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
TOP3A-212ENST00000582122 ARFGEF2Q9Y6D5 1785 aa13.24□□□□□ -0.29
TOP3A-212ENST00000582122 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-212ENST00000582122 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
TOP3A-212ENST00000582122 KIAA1551Q9HCM1 1747 aa13.23□□□□□ -0.29
TOP3A-212ENST00000582122 TOMM70O94826 608 aa13.23□□□□□ -0.29
TOP3A-212ENST00000582122 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-212ENST00000582122 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
TOP3A-212ENST00000582122 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
TOP3A-212ENST00000582122 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
TOP3A-212ENST00000582122 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
TOP3A-212ENST00000582122 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
TOP3A-212ENST00000582122 CDHR2Q9BYE9 1310 aa13.22□□□□□ -0.29
TOP3A-212ENST00000582122 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
TOP3A-212ENST00000582122 IPO8O15397 1037 aaKnown RBP13.22□□□□□ -0.29
TOP3A-212ENST00000582122 TMC4Q7Z404 712 aa13.22□□□□□ -0.29
TOP3A-212ENST00000582122 CCDC24Q8N4L8 307 aa13.22□□□□□ -0.29
TOP3A-212ENST00000582122 ARHGAP45Q92619 1136 aa13.22□□□□□ -0.29
TOP3A-212ENST00000582122 ABCC12Q96J65 1359 aa13.21□□□□□ -0.29
TOP3A-212ENST00000582122 BRCA1P38398 1863 aaKnown RBP13.21□□□□□ -0.29
TOP3A-212ENST00000582122 ANKRD31Q8N7Z5 1873 aa13.21□□□□□ -0.29
TOP3A-212ENST00000582122 IRS4O14654 1257 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-212ENST00000582122 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
TOP3A-212ENST00000582122 RARSP54136 660 aaKnown RBP13.21□□□□□ -0.29
TOP3A-212ENST00000582122 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
TOP3A-212ENST00000582122 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.29
TOP3A-212ENST00000582122 FAM89AQ96GI7 184 aa13.21□□□□□ -0.29
TOP3A-212ENST00000582122 API5Q9BZZ5 524 aaKnown RBP13.21□□□□□ -0.29
TOP3A-212ENST00000582122 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 PDE8AO60658 829 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 BBOX1O75936 387 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 HCLS1P14317 486 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-212ENST00000582122 GCKRQ14397 625 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
TOP3A-212ENST00000582122 ARHGAP27Q6ZUM4 889 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 SRCIN1Q9C0H9 1055 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
TOP3A-212ENST00000582122 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
TOP3A-212ENST00000582122 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
TOP3A-212ENST00000582122 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
TOP3A-212ENST00000582122 H7C1W4 665 aa13.18□□□□□ -0.3
TOP3A-212ENST00000582122 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
TOP3A-212ENST00000582122 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
TOP3A-212ENST00000582122 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
TOP3A-212ENST00000582122 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
TOP3A-212ENST00000582122 C9orf78Q9NZ63 289 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-212ENST00000582122 LTBP3Q9NS15 1303 aa13.17□□□□□ -0.3
TOP3A-212ENST00000582122 F6X3S4 739 aa13.17□□□□□ -0.3
TOP3A-212ENST00000582122 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-212ENST00000582122 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms