RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
PPP4R1-220ENST00000581835 NLRP10Q86W26 655 aa13.25□□□□□ -0.29
PPP4R1-220ENST00000581835 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
PPP4R1-220ENST00000581835 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
PPP4R1-220ENST00000581835 RASSF7Q02833 373 aa13.24□□□□□ -0.29
PPP4R1-220ENST00000581835 C9orf131Q5VYM1 1079 aa13.24□□□□□ -0.29
PPP4R1-220ENST00000581835 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
PPP4R1-220ENST00000581835 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-220ENST00000581835 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-220ENST00000581835 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
PPP4R1-220ENST00000581835 NFKBIEO00221 500 aa13.23□□□□□ -0.29
PPP4R1-220ENST00000581835 PRELPP51888 382 aa13.23□□□□□ -0.29
PPP4R1-220ENST00000581835 SLC10A5Q5PT55 438 aa13.23□□□□□ -0.29
PPP4R1-220ENST00000581835 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
PPP4R1-220ENST00000581835 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
PPP4R1-220ENST00000581835 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-220ENST00000581835 LAMB2P55268 1798 aa13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 ZNF521Q96K83 1311 aa13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 ATP5J2-PTCD1G3V325 749 aa13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
PPP4R1-220ENST00000581835 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 VAMP4O75379 141 aa13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 LMNB1P20700 586 aa13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 HOXA10P31260 410 aaPredicted RBP13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 EXOSC9Q06265 439 aaKnown RBP13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 SOGA3Q5TF21 947 aa13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 SYNE4Q8N205 404 aa13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 NLRP3Q96P20 1036 aa13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.29
PPP4R1-220ENST00000581835 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
PPP4R1-220ENST00000581835 DDX60Q8IY21 1712 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-220ENST00000581835 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
PPP4R1-220ENST00000581835 HCLS1P14317 486 aaPredicted RBP13.2□□□□□ -0.3
PPP4R1-220ENST00000581835 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
PPP4R1-220ENST00000581835 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
PPP4R1-220ENST00000581835 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
PPP4R1-220ENST00000581835 LTBP3Q9NS15 1303 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 TAF1P21675 1872 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 OLFM4Q6UX06 510 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 G2E3Q7L622 706 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 MYD88Q99836 296 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 TAOK3Q9H2K8 898 aa13.19□□□□□ -0.3
PPP4R1-220ENST00000581835 PI4KAP2A4QPH2 592 aa13.18□□□□□ -0.3
PPP4R1-220ENST00000581835 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-220ENST00000581835 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
PPP4R1-220ENST00000581835 PI4KAP1Q8N8J0 262 aa13.18□□□□□ -0.3
PPP4R1-220ENST00000581835 FAM89AQ96GI7 184 aa13.18□□□□□ -0.3
PPP4R1-220ENST00000581835 METTL22Q9BUU2 404 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-220ENST00000581835 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
PPP4R1-220ENST00000581835 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-220ENST00000581835 CCDC191Q8NCU4 936 aa13.17□□□□□ -0.3
PPP4R1-220ENST00000581835 MAP3K2Q9Y2U5 619 aa13.17□□□□□ -0.3
PPP4R1-220ENST00000581835 SNED1Q8TER0 1413 aa13.16□□□□□ -0.3
PPP4R1-220ENST00000581835 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
PPP4R1-220ENST00000581835 FLIIQ13045 1269 aa13.16□□□□□ -0.3
PPP4R1-220ENST00000581835 RTL5Q5HYW3 569 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-220ENST00000581835 RTKN2Q8IZC4 609 aa13.16□□□□□ -0.3
PPP4R1-220ENST00000581835 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-220ENST00000581835 ABCC4O15439 1325 aa13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 KIF3CO14782 793 aa13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 C1QTNF8P60827 252 aa13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 MIER1Q8N108 512 aa13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 CWC25Q9NXE8 425 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-220ENST00000581835 GLTPD2A6NH11 291 aa13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 E9PSI1 815 aa13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 SF3B3Q15393 1217 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
PPP4R1-220ENST00000581835 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 BBOX1O75936 387 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 GRAPQ13588 217 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 PSMD1Q99460 953 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 MYH3P11055 1940 aa13.13□□□□□ -0.31
PPP4R1-220ENST00000581835 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
PPP4R1-220ENST00000581835 CWF19L2Q2TBE0 894 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms