RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
CSNK1D-220ENST00000581737 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
CSNK1D-220ENST00000581737 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 TTLL7Q6ZT98 887 aa17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 NUP98P52948 1817 aa17.19■□□□□ 0.34
CSNK1D-220ENST00000581737 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
CSNK1D-220ENST00000581737 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-220ENST00000581737 ALDH1L2Q3SY69 923 aa17.18■□□□□ 0.34
CSNK1D-220ENST00000581737 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
CSNK1D-220ENST00000581737 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
CSNK1D-220ENST00000581737 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
CSNK1D-220ENST00000581737 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-220ENST00000581737 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
CSNK1D-220ENST00000581737 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
CSNK1D-220ENST00000581737 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
CSNK1D-220ENST00000581737 ARFGEF2Q9Y6D5 1785 aa17.17■□□□□ 0.34
CSNK1D-220ENST00000581737 H0YIN7 160 aa17.16■□□□□ 0.34
CSNK1D-220ENST00000581737 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-220ENST00000581737 C21orf2O43822 256 aa17.16■□□□□ 0.34
CSNK1D-220ENST00000581737 ZBTB3Q9H5J0 574 aa17.16■□□□□ 0.34
CSNK1D-220ENST00000581737 MKRN1Q9UHC7 482 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-220ENST00000581737 FLIIQ13045 1269 aa17.15■□□□□ 0.34
CSNK1D-220ENST00000581737 TBC1D9BQ66K14 1250 aa17.15■□□□□ 0.34
CSNK1D-220ENST00000581737 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-220ENST00000581737 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
CSNK1D-220ENST00000581737 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
CSNK1D-220ENST00000581737 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
CSNK1D-220ENST00000581737 RIC3Q7Z5B4 369 aa17.14■□□□□ 0.33
CSNK1D-220ENST00000581737 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
CSNK1D-220ENST00000581737 SETDB2Q96T68 719 aa17.14■□□□□ 0.33
CSNK1D-220ENST00000581737 PHAXQ9H814 394 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-220ENST00000581737 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-220ENST00000581737 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
CSNK1D-220ENST00000581737 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
CSNK1D-220ENST00000581737 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-220ENST00000581737 HLFQ16534 295 aa17.12■□□□□ 0.33
CSNK1D-220ENST00000581737 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
CSNK1D-220ENST00000581737 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
CSNK1D-220ENST00000581737 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-220ENST00000581737 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSNK1D-220ENST00000581737 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
CSNK1D-220ENST00000581737 COL11A2P13942 1736 aaPredicted RBP17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 RARSP54136 660 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 G2E3Q7L622 706 aa17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 PTPRCP08575 1304 aa17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
CSNK1D-220ENST00000581737 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 FOXN1O15353 648 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 TCIRG1Q13488 830 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
CSNK1D-220ENST00000581737 NPHP1O15259 732 aa17.09■□□□□ 0.33
CSNK1D-220ENST00000581737 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
CSNK1D-220ENST00000581737 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
CSNK1D-220ENST00000581737 MAP3K2Q9Y2U5 619 aa17.09■□□□□ 0.33
CSNK1D-220ENST00000581737 CCDC88AQ3V6T2 1871 aa17.09■□□□□ 0.33
CSNK1D-220ENST00000581737 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
CSNK1D-220ENST00000581737 GPTP24298 496 aa17.08■□□□□ 0.32
CSNK1D-220ENST00000581737 NBPF5PQ86XG9 351 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-220ENST00000581737 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
CSNK1D-220ENST00000581737 METTL22Q9BUU2 404 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-220ENST00000581737 CNTNAP1P78357 1384 aa17.07■□□□□ 0.32
CSNK1D-220ENST00000581737 PDE6BP35913 854 aa17.07■□□□□ 0.32
CSNK1D-220ENST00000581737 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-220ENST00000581737 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
CSNK1D-220ENST00000581737 PPP1R42Q7Z4L9 355 aa17.07■□□□□ 0.32
CSNK1D-220ENST00000581737 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
CSNK1D-220ENST00000581737 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
CSNK1D-220ENST00000581737 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 LTBP3Q9NS15 1303 aa17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 ST5P78524 1137 aa17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 MYD88Q99836 296 aa17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 ISCA1Q9BUE6 129 aa17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-220ENST00000581737 FER1L6Q2WGJ9 1857 aa17.05■□□□□ 0.32
CSNK1D-220ENST00000581737 SRGNP10124 158 aa17.05■□□□□ 0.32
CSNK1D-220ENST00000581737 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-220ENST00000581737 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
CSNK1D-220ENST00000581737 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
CSNK1D-220ENST00000581737 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
CSNK1D-220ENST00000581737 ITGBL1O95965 494 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-220ENST00000581737 VEGFBP49765 207 aa17.04■□□□□ 0.32
CSNK1D-220ENST00000581737 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms