RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
SLC9A3R1-204ENST00000581356 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
SLC9A3R1-204ENST00000581356 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
SLC9A3R1-204ENST00000581356 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
SLC9A3R1-204ENST00000581356 IL16Q14005 1332 aa16.39■□□□□ 0.21
SLC9A3R1-204ENST00000581356 CACNA1SQ13698 1873 aa16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 CCDC30Q5VVM6 783 aa16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 NMRK2Q9NPI5 230 aa16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
SLC9A3R1-204ENST00000581356 RIC1Q4ADV7 1423 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 KIF3CO14782 793 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 NLRP3Q96P20 1036 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 TAOK3Q9H2K8 898 aa16.37■□□□□ 0.21
SLC9A3R1-204ENST00000581356 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 CCDC93Q567U6 631 aa16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 LTBP3Q9NS15 1303 aa16.36■□□□□ 0.21
SLC9A3R1-204ENST00000581356 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 KDM2BQ8NHM5 1336 aa16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 SH3TC1Q8TE82 1336 aa16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 ZC3H4Q9UPT8 1303 aaKnown RBP16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 ANKRD36CQ5JPF3 1778 aa16.35■□□□□ 0.21
SLC9A3R1-204ENST00000581356 CCDC88AQ3V6T2 1871 aa16.34■□□□□ 0.21
SLC9A3R1-204ENST00000581356 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
SLC9A3R1-204ENST00000581356 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
SLC9A3R1-204ENST00000581356 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
SLC9A3R1-204ENST00000581356 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
SLC9A3R1-204ENST00000581356 FAM89AQ96GI7 184 aa16.33■□□□□ 0.2
SLC9A3R1-204ENST00000581356 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
SLC9A3R1-204ENST00000581356 RRAGCQ9HB90 399 aa16.33■□□□□ 0.2
SLC9A3R1-204ENST00000581356 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
SLC9A3R1-204ENST00000581356 GLTPD2A6NH11 291 aa16.32■□□□□ 0.2
SLC9A3R1-204ENST00000581356 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
SLC9A3R1-204ENST00000581356 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
SLC9A3R1-204ENST00000581356 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
SLC9A3R1-204ENST00000581356 MYD88Q99836 296 aa16.32■□□□□ 0.2
SLC9A3R1-204ENST00000581356 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
SLC9A3R1-204ENST00000581356 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
SLC9A3R1-204ENST00000581356 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
SLC9A3R1-204ENST00000581356 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
SLC9A3R1-204ENST00000581356 SLC51AQ86UW1 340 aa16.31■□□□□ 0.2
SLC9A3R1-204ENST00000581356 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
SLC9A3R1-204ENST00000581356 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
SLC9A3R1-204ENST00000581356 G2E3Q7L622 706 aa16.3■□□□□ 0.2
SLC9A3R1-204ENST00000581356 METTL22Q9BUU2 404 aaPredicted RBP16.3■□□□□ 0.2
SLC9A3R1-204ENST00000581356 TIAM2Q8IVF5 1701 aa16.3■□□□□ 0.2
SLC9A3R1-204ENST00000581356 ABCC4O15439 1325 aa16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 PI4KAP2A4QPH2 592 aa16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 VAMP4O75379 141 aa16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 TOMM70O94826 608 aa16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 KSR2Q6VAB6 950 aa16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 DDX46Q7L014 1031 aaKnown RBP16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 PI4KAP1Q8N8J0 262 aa16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 MAP3K2Q9Y2U5 619 aa16.29■□□□□ 0.2
SLC9A3R1-204ENST00000581356 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
SLC9A3R1-204ENST00000581356 PSMD1Q99460 953 aa16.28■□□□□ 0.2
SLC9A3R1-204ENST00000581356 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
SLC9A3R1-204ENST00000581356 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
SLC9A3R1-204ENST00000581356 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 BBOX1O75936 387 aa16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 VEGFAP15692 232 aaPredicted RBP16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 GRIPAP1Q4V328 841 aa16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 ZBTB38Q8NAP3 1195 aaPredicted RBP16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 ATP6V0A2Q9Y487 856 aa16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 LAMB2P55268 1798 aa16.27■□□□□ 0.2
SLC9A3R1-204ENST00000581356 DDNO94850 711 aaPredicted RBP16.26■□□□□ 0.19
SLC9A3R1-204ENST00000581356 GRAPQ13588 217 aa16.26■□□□□ 0.19
SLC9A3R1-204ENST00000581356 SF3B3Q15393 1217 aaKnown RBP16.26■□□□□ 0.19
SLC9A3R1-204ENST00000581356 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
SLC9A3R1-204ENST00000581356 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
SLC9A3R1-204ENST00000581356 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 POTECB2RU33 542 aa16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 PCCAP05165 728 aaPredicted RBP16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 IGKV5-2P06315 115 aa16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 FLIIQ13045 1269 aa16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 RBM46Q8TBY0 533 aaKnown RBP16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
SLC9A3R1-204ENST00000581356 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms