RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
SKA2-206ENST00000581068 PCCAP05165 728 aaPredicted RBP13.74□□□□□ -0.21
SKA2-206ENST00000581068 GPTP24298 496 aa13.74□□□□□ -0.21
SKA2-206ENST00000581068 POLA2Q14181 598 aa13.74□□□□□ -0.21
SKA2-206ENST00000581068 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
SKA2-206ENST00000581068 PROM2Q8N271 834 aa13.74□□□□□ -0.21
SKA2-206ENST00000581068 JARID2Q92833 1246 aaPredicted RBP13.74□□□□□ -0.21
SKA2-206ENST00000581068 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
SKA2-206ENST00000581068 C4BP0C0L5 1744 aa13.73□□□□□ -0.21
SKA2-206ENST00000581068 SRGAP3O43295 1099 aa13.73□□□□□ -0.21
SKA2-206ENST00000581068 NUCB1Q02818 461 aa13.73□□□□□ -0.21
SKA2-206ENST00000581068 PARP10Q53GL7 1025 aa13.73□□□□□ -0.21
SKA2-206ENST00000581068 TRAPPC3LQ5T215 181 aa13.73□□□□□ -0.21
SKA2-206ENST00000581068 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
SKA2-206ENST00000581068 KAZALD1Q96I82 304 aa13.73□□□□□ -0.21
SKA2-206ENST00000581068 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
SKA2-206ENST00000581068 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
SKA2-206ENST00000581068 ZPR1O75312 459 aa13.72□□□□□ -0.21
SKA2-206ENST00000581068 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
SKA2-206ENST00000581068 ZBTB38Q8NAP3 1195 aaPredicted RBP13.72□□□□□ -0.21
SKA2-206ENST00000581068 ARHGEF1Q92888 912 aaKnown RBP13.72□□□□□ -0.21
SKA2-206ENST00000581068 NUP98P52948 1817 aa13.71□□□□□ -0.21
SKA2-206ENST00000581068 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.21
SKA2-206ENST00000581068 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
SKA2-206ENST00000581068 RFC4P35249 363 aa13.71□□□□□ -0.21
SKA2-206ENST00000581068 RABL6Q3YEC7 729 aaPredicted RBP13.71□□□□□ -0.21
SKA2-206ENST00000581068 HSP90AB4PQ58FF6 505 aa13.71□□□□□ -0.21
SKA2-206ENST00000581068 EPHA10Q5JZY3 1008 aa13.71□□□□□ -0.21
SKA2-206ENST00000581068 TRMT112Q9UI30 125 aaKnown RBP13.71□□□□□ -0.21
SKA2-206ENST00000581068 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.21
SKA2-206ENST00000581068 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
SKA2-206ENST00000581068 RGS3P49796 1198 aa13.7□□□□□ -0.22
SKA2-206ENST00000581068 FOXO4P98177 505 aa13.7□□□□□ -0.22
SKA2-206ENST00000581068 RTL5Q5HYW3 569 aaPredicted RBP13.7□□□□□ -0.22
SKA2-206ENST00000581068 USPL1Q5W0Q7 1092 aa13.7□□□□□ -0.22
SKA2-206ENST00000581068 SMIM5Q71RC9 77 aa13.7□□□□□ -0.22
SKA2-206ENST00000581068 SKAP1Q86WV1 359 aa13.7□□□□□ -0.22
SKA2-206ENST00000581068 UTP14AQ9BVJ6 771 aaKnown RBP13.7□□□□□ -0.22
SKA2-206ENST00000581068 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
SKA2-206ENST00000581068 UBN2Q6ZU65 1347 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 BCORQ6W2J9 1755 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 SURF6O75683 361 aaKnown RBP13.69□□□□□ -0.22
SKA2-206ENST00000581068 PHF14O94880 888 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 SSFA2P28290 1259 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
SKA2-206ENST00000581068 SUSD4Q5VX71 490 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 FAM89AQ96GI7 184 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 SRP68Q9UHB9 627 aaKnown RBP13.69□□□□□ -0.22
SKA2-206ENST00000581068 EXOC6BQ9Y2D4 811 aa13.69□□□□□ -0.22
SKA2-206ENST00000581068 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
SKA2-206ENST00000581068 TNS1Q9HBL0 1735 aaKnown RBP13.69□□□□□ -0.22
SKA2-206ENST00000581068 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
SKA2-206ENST00000581068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
SKA2-206ENST00000581068 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
SKA2-206ENST00000581068 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
SKA2-206ENST00000581068 SH3TC1Q8TE82 1336 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 APBB1O00213 710 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 IRS4O14654 1257 aaPredicted RBP13.67□□□□□ -0.22
SKA2-206ENST00000581068 PDE8AO60658 829 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 PDE4AP27815 886 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 ERC1Q8IUD2 1116 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 RGPD3A6NKT7 1758 aaPredicted RBP13.67□□□□□ -0.22
SKA2-206ENST00000581068 RGPD4Q7Z3J3 1758 aa13.67□□□□□ -0.22
SKA2-206ENST00000581068 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 FAM177BA6PVY3 158 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 NTSR2O95665 410 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 CSF1RP07333 972 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 BAG6P46379 1132 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.22
SKA2-206ENST00000581068 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
SKA2-206ENST00000581068 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 TFCP2L1Q9NZI6 479 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
SKA2-206ENST00000581068 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
SKA2-206ENST00000581068 RFX5P48382 616 aaPredicted RBP13.65□□□□□ -0.22
SKA2-206ENST00000581068 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
SKA2-206ENST00000581068 EZH2Q15910 746 aaKnown RBP13.65□□□□□ -0.22
SKA2-206ENST00000581068 BICDL1Q6ZP65 573 aa13.65□□□□□ -0.22
SKA2-206ENST00000581068 SYNE4Q8N205 404 aa13.65□□□□□ -0.22
SKA2-206ENST00000581068 KIF1BPQ96EK5 621 aa13.65□□□□□ -0.22
SKA2-206ENST00000581068 NYXQ9GZU5 481 aa13.65□□□□□ -0.22
SKA2-206ENST00000581068 PA2G4Q9UQ80 394 aaKnown RBP13.65□□□□□ -0.22
SKA2-206ENST00000581068 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
SKA2-206ENST00000581068 CTSWP56202 376 aa13.64□□□□□ -0.23
SKA2-206ENST00000581068 PTPN12Q05209 780 aaKnown RBP13.64□□□□□ -0.23
SKA2-206ENST00000581068 ZNF827Q17R98 1081 aa13.64□□□□□ -0.23
SKA2-206ENST00000581068 CCDC125Q86Z20 511 aa13.64□□□□□ -0.23
SKA2-206ENST00000581068 RHPN1Q8TCX5 695 aa13.64□□□□□ -0.23
SKA2-206ENST00000581068 KCNA4P22459 653 aa13.63□□□□□ -0.23
SKA2-206ENST00000581068 CCDC57Q2TAC2 916 aa13.63□□□□□ -0.23
SKA2-206ENST00000581068 TTLL11Q8NHH1 800 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms