RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 SIL1Q9H173 461 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 CHMP3Q9Y3E7 222 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 IBTKQ9P2D0 1353 aaPredicted RBP7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 NHSQ6T4R5 1651 aa7.66□□□□□ -1.18
RNU4ATAC-201ENST00000580972 LAMB4A4D0S4 1761 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ERVV-1B6SEH8 477 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 PCCAP05165 728 aaPredicted RBP7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 HCLS1P14317 486 aaPredicted RBP7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 FAM161AQ3B820 660 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 RC3H1Q5TC82 1133 aaKnown RBP7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 TBC1D9BQ66K14 1250 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 SLC51AQ86UW1 340 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 PLEKHM2Q8IWE5 1019 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 PELP1Q8IZL8 1130 aaKnown RBP7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ZNF594Q96JF6 807 aaPredicted RBP7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 AK7Q96M32 723 aa7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 NIP7Q9Y221 180 aaKnown RBP eCLIP7.65□□□□□ -1.18
RNU4ATAC-201ENST00000580972 ITGB4P16144 1822 aa7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 NTSR2O95665 410 aa7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 GSPT1P15170 499 aaKnown RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RABL6Q3YEC7 729 aaPredicted RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 C8orf34Q49A92 452 aa7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ZBTB38Q8NAP3 1195 aaPredicted RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PUS3Q9BZE2 481 aaKnown RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ANO8Q9HCE9 1232 aaPredicted RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 TLR7Q9NYK1 1049 aaKnown RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 TRMT112Q9UI30 125 aaKnown RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RTCBQ9Y3I0 505 aaKnown RBP7.64□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ABCC12Q96J65 1359 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 IRS4O14654 1257 aaPredicted RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 SASH1O94885 1247 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PTPN12Q05209 780 aaKnown RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 EN1Q05925 392 aaPredicted RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 OS9Q13438 667 aaPredicted RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 EZH2Q15910 746 aaKnown RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ERFEQ4G0M1 354 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 LRRC24Q50LG9 513 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 HSP90AB3PQ58FF7 597 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 DEFB132Q7Z7B7 95 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 NPM2Q86SE8 214 aaKnown RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RHPN1Q8TCX5 695 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 UTP14AQ9BVJ6 771 aaKnown RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 LRRCC1Q9C099 1032 aa7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 NOP58Q9Y2X3 529 aaKnown RBP7.63□□□□□ -1.19
RNU4ATAC-201ENST00000580972 SALL3Q9BXA9 1300 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 USP42Q9H9J4 1324 aaKnown RBP7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 SEC24BO95487 1268 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CTSWP56202 376 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 TFCP2Q12800 502 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 AKT1S1Q96B36 256 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 BACH2Q9BYV9 841 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 GREM2Q9H772 168 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 SEC31BQ9NQW1 1179 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 NARFQ9UHQ1 456 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 BTAF1O14981 1849 aa7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 VIRMAQ69YN4 1812 aaKnown RBP7.62□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RREB1Q92766 1687 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CDHR2Q9BYE9 1310 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 MAP4K4O95819 1239 aaPredicted RBP7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PDE1AP54750 535 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 NFIXQ14938 502 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 TRAPPC3LQ5T215 181 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 MSL1Q68DK7 614 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ATG9AQ7Z3C6 839 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 TTLL11Q8NHH1 800 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CAMKK2Q96RR4 588 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PLA2G12BQ9BX93 195 aa7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CCDC8Q9H0W5 538 aaPredicted RBP7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
RNU4ATAC-201ENST00000580972 SH3TC1Q8TE82 1336 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PLSCR1O15162 318 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RAB11FIP3O75154 756 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ZPR1O75312 459 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CSF1RP07333 972 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 GYS1P13807 737 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ITGA6P23229 1130 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 RFC4P35249 363 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 DDR1Q08345 913 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 G3BP1Q13283 466 aaKnown RBP eCLIP7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PARP10Q53GL7 1025 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 TTC22Q5TAA0 569 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 AACSQ86V21 672 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 COL23A1Q86Y22 540 aaPredicted RBP7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 EAF2Q96CJ1 260 aaPredicted RBP7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 KIF1BPQ96EK5 621 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 COPRSQ9NQ92 184 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ZNF652Q9Y2D9 606 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 NUP188Q5SRE5 1749 aa7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CICQ96RK0 1608 aaPredicted RBP7.6□□□□□ -1.19
RNU4ATAC-201ENST00000580972 ARFGEF2Q9Y6D5 1785 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PNPLA7Q6ZV29 1317 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 SNAP23O00161 211 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 MSH5O43196 834 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 PDE8AO60658 829 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 MX1P20591 662 aa7.59□□□□□ -1.19
RNU4ATAC-201ENST00000580972 CLEC4GQ6UXB4 293 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms