RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 MON2Q7Z3U7 1717 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 AKAP12Q02952 1782 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 OVOS2A0A0J9YW53 1432 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 OVOS2Q6IE36 1432 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 PPM1GO15355 546 aaPredicted RBP8.23□□□□□ -1.09
PTPRM-213ENST00000580949 DIAPH1O60610 1272 aaKnown RBP8.23□□□□□ -1.09
PTPRM-213ENST00000580949 GPR37L1O60883 481 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 U2AF1L5P0DN76 240 aaPredicted RBP8.23□□□□□ -1.09
PTPRM-213ENST00000580949 U2AF1Q01081 240 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPRM-213ENST00000580949 AGERQ15109 404 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 NUDCQ9Y266 331 aa8.23□□□□□ -1.09
PTPRM-213ENST00000580949 SHPRHQ149N8 1683 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 TNFRSF10AO00220 468 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
PTPRM-213ENST00000580949 SIAH2O43255 324 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 IL13P35225 146 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 TCP11L2Q8N4U5 519 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 RUNDC1Q96C34 613 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 PLEKHF1Q96S99 279 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 ARHGAP9Q9BRR9 750 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 TBC1D2BQ9UPU7 963 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 ZNF335Q9H4Z2 1342 aaPredicted RBP8.22□□□□□ -1.09
PTPRM-213ENST00000580949 STRCP1A6NGW2 1772 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 RGPD8O14715 1765 aaPredicted RBP8.22□□□□□ -1.09
PTPRM-213ENST00000580949 NRKQ7Z2Y5 1582 aa8.22□□□□□ -1.09
PTPRM-213ENST00000580949 ANKRD26Q9UPS8 1709 aa8.21□□□□□ -1.09
PTPRM-213ENST00000580949 STRCQ7RTU9 1775 aa8.21□□□□□ -1.1
PTPRM-213ENST00000580949 FOXO3O43524 673 aa8.21□□□□□ -1.1
PTPRM-213ENST00000580949 XPCQ01831 940 aaPredicted RBP8.21□□□□□ -1.1
PTPRM-213ENST00000580949 PSME1Q06323 249 aa8.21□□□□□ -1.1
PTPRM-213ENST00000580949 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
PTPRM-213ENST00000580949 CYP4X1Q8N118 509 aa8.21□□□□□ -1.1
PTPRM-213ENST00000580949 MPNDQ8N594 471 aa8.21□□□□□ -1.1
PTPRM-213ENST00000580949 IRX2Q9BZI1 471 aaPredicted RBP8.21□□□□□ -1.1
PTPRM-213ENST00000580949 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
PTPRM-213ENST00000580949 KIF20BQ96Q89 1820 aa8.21□□□□□ -1.1
PTPRM-213ENST00000580949 NCOA3Q9Y6Q9 1424 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 C1orf167Q5SNV9 1468 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 MAGEB6P1A0A0J9YX57 407 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 NRG2O14511 850 aaPredicted RBP8.2□□□□□ -1.1
PTPRM-213ENST00000580949 GFRA3O60609 400 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 ATF3P18847 181 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 TRMT2AQ8IZ69 625 aaKnown RBP8.2□□□□□ -1.1
PTPRM-213ENST00000580949 ABTB2Q8N961 1025 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 SNIP1Q8TAD8 396 aaKnown RBP8.2□□□□□ -1.1
PTPRM-213ENST00000580949 OCSTAMPQ9BR26 566 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 GDPD2Q9HCC8 539 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 TOR4AQ9NXH8 423 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 MAP3K19Q56UN5 1328 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 ITSN1Q15811 1721 aa8.2□□□□□ -1.1
PTPRM-213ENST00000580949 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
PTPRM-213ENST00000580949 SLFN5Q08AF3 891 aa8.19□□□□□ -1.1
PTPRM-213ENST00000580949 HSP90AB2PQ58FF8 381 aa8.19□□□□□ -1.1
PTPRM-213ENST00000580949 KRT28Q7Z3Y7 464 aa8.19□□□□□ -1.1
PTPRM-213ENST00000580949 ZBTB33Q86T24 672 aa8.19□□□□□ -1.1
PTPRM-213ENST00000580949 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
PTPRM-213ENST00000580949 TRMT44Q8IYL2 757 aaKnown RBP8.19□□□□□ -1.1
PTPRM-213ENST00000580949 MST1RQ04912 1400 aa8.19□□□□□ -1.1
PTPRM-213ENST00000580949 CDK12Q9NYV4 1490 aaPredicted RBP8.19□□□□□ -1.1
PTPRM-213ENST00000580949 TTC24A2A3L6 582 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-213ENST00000580949 RAD21O60216 631 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 FBXO45P0C2W1 286 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 IRX6P78412 446 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-213ENST00000580949 NR1H3Q13133 447 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 IRF5Q13568 498 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 EIF4A2Q14240 407 aaKnown RBP8.18□□□□□ -1.1
PTPRM-213ENST00000580949 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 DUSP27Q5VZP5 1158 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 NGEFQ8N5V2 710 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 DDX17Q92841 729 aaKnown RBP8.18□□□□□ -1.1
PTPRM-213ENST00000580949 PHACTR3Q96KR7 559 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 RNF123Q5XPI4 1314 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 IQSEC2Q5JU85 1478 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 LRRC7Q96NW7 1537 aa8.18□□□□□ -1.1
PTPRM-213ENST00000580949 HMOX1P09601 288 aa8.17□□□□□ -1.1
PTPRM-213ENST00000580949 PRKAR2BP31323 418 aa8.17□□□□□ -1.1
PTPRM-213ENST00000580949 TMPOP42166 694 aaKnown RBP8.17□□□□□ -1.1
PTPRM-213ENST00000580949 ABL2P42684 1182 aa8.17□□□□□ -1.1
PTPRM-213ENST00000580949 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
PTPRM-213ENST00000580949 PIK3C2AO00443 1686 aa8.17□□□□□ -1.1
PTPRM-213ENST00000580949 DCCP43146 1447 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 MSH6P52701 1360 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 CCDC27Q2M243 656 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 AEBP1Q8IUX7 1158 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 POM121Q96HA1 1249 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 RCAN3Q9UKA8 241 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 TLL2Q9Y6L7 1015 aa8.16□□□□□ -1.1
PTPRM-213ENST00000580949 PEAK1Q9H792 1746 aa8.15□□□□□ -1.1
PTPRM-213ENST00000580949 SBNO1A3KN83 1393 aa8.15□□□□□ -1.1
PTPRM-213ENST00000580949 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
PTPRM-213ENST00000580949 NEFLP07196 543 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms