RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 SLFN5Q08AF3 891 aa21.04■□□□□ 0.96
IFT20-210ENST00000580357 ERFEQ4G0M1 354 aa21.04■□□□□ 0.96
IFT20-210ENST00000580357 ISCA1Q9BUE6 129 aa21.04■□□□□ 0.96
IFT20-210ENST00000580357 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
IFT20-210ENST00000580357 NUTM1Q86Y26 1132 aa21.03■□□□□ 0.96
IFT20-210ENST00000580357 NLRP3Q96P20 1036 aa21.03■□□□□ 0.96
IFT20-210ENST00000580357 TRMT112Q9UI30 125 aaKnown RBP21.03■□□□□ 0.96
IFT20-210ENST00000580357 HSP90B1P14625 803 aaKnown RBP21.02■□□□□ 0.96
IFT20-210ENST00000580357 ZNF428Q96B54 188 aa21.02■□□□□ 0.96
IFT20-210ENST00000580357 METTL22Q9BUU2 404 aaPredicted RBP21.01■□□□□ 0.95
IFT20-210ENST00000580357 RIC1Q4ADV7 1423 aa21.01■□□□□ 0.95
IFT20-210ENST00000580357 SH3TC1Q8TE82 1336 aa21.01■□□□□ 0.95
IFT20-210ENST00000580357 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
IFT20-210ENST00000580357 NEXNQ0ZGT2 675 aa21■□□□□ 0.95
IFT20-210ENST00000580357 CRY2Q49AN0 593 aa21■□□□□ 0.95
IFT20-210ENST00000580357 SOGA3Q5TF21 947 aa21■□□□□ 0.95
IFT20-210ENST00000580357 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
IFT20-210ENST00000580357 PI4KAP2A4QPH2 592 aa20.99■□□□□ 0.95
IFT20-210ENST00000580357 ATP5J2-PTCD1G3V325 749 aa20.99■□□□□ 0.95
IFT20-210ENST00000580357 TRMT2AQ8IZ69 625 aaKnown RBP20.99■□□□□ 0.95
IFT20-210ENST00000580357 PI4KAP1Q8N8J0 262 aa20.99■□□□□ 0.95
IFT20-210ENST00000580357 RPGRQ92834 1020 aaKnown RBP20.99■□□□□ 0.95
IFT20-210ENST00000580357 MAP3K2Q9Y2U5 619 aa20.99■□□□□ 0.95
IFT20-210ENST00000580357 HOXA10P31260 410 aaPredicted RBP20.98■□□□□ 0.95
IFT20-210ENST00000580357 FLIIQ13045 1269 aa20.98■□□□□ 0.95
IFT20-210ENST00000580357 RBM17Q96I25 401 aaKnown RBP20.98■□□□□ 0.95
IFT20-210ENST00000580357 MYD88Q99836 296 aa20.98■□□□□ 0.95
IFT20-210ENST00000580357 BRCA1P38398 1863 aaKnown RBP20.98■□□□□ 0.95
IFT20-210ENST00000580357 ANKRD31Q8N7Z5 1873 aa20.98■□□□□ 0.95
IFT20-210ENST00000580357 CT47B1P0C2W7 299 aaPredicted RBP20.97■□□□□ 0.95
IFT20-210ENST00000580357 CRAMP1Q96RY5 1269 aa20.97■□□□□ 0.95
IFT20-210ENST00000580357 CACNA1FO60840 1977 aa20.97■□□□□ 0.95
IFT20-210ENST00000580357 FKBP5Q13451 457 aaPredicted RBP20.96■□□□□ 0.95
IFT20-210ENST00000580357 PRPF40BQ6NWY9 871 aaKnown RBP20.96■□□□□ 0.95
IFT20-210ENST00000580357 G2E3Q7L622 706 aa20.96■□□□□ 0.95
IFT20-210ENST00000580357 ZBTB38Q8NAP3 1195 aaPredicted RBP20.96■□□□□ 0.95
IFT20-210ENST00000580357 CWC25Q9NXE8 425 aaPredicted RBP20.96■□□□□ 0.95
IFT20-210ENST00000580357 ARFGEF1Q9Y6D6 1849 aa20.96■□□□□ 0.95
IFT20-210ENST00000580357 C21orf2O43822 256 aa20.95■□□□□ 0.94
IFT20-210ENST00000580357 GRIPAP1Q4V328 841 aa20.95■□□□□ 0.94
IFT20-210ENST00000580357 CDCA7LQ96GN5 454 aa20.95■□□□□ 0.94
IFT20-210ENST00000580357 ABCC12Q96J65 1359 aa20.95■□□□□ 0.94
IFT20-210ENST00000580357 DLEC1Q9Y238 1755 aa20.95■□□□□ 0.94
IFT20-210ENST00000580357 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
IFT20-210ENST00000580357 ANKRD36CQ5JPF3 1778 aa20.93■□□□□ 0.94
IFT20-210ENST00000580357 PCCAP05165 728 aaPredicted RBP20.93■□□□□ 0.94
IFT20-210ENST00000580357 HCLS1P14317 486 aaPredicted RBP20.93■□□□□ 0.94
IFT20-210ENST00000580357 CC2D2BQ6DHV5 1058 aa20.93■□□□□ 0.94
IFT20-210ENST00000580357 C7orf43Q8WVR3 580 aa20.93■□□□□ 0.94
IFT20-210ENST00000580357 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
IFT20-210ENST00000580357 TMX4Q9H1E5 349 aaPredicted RBP20.93■□□□□ 0.94
IFT20-210ENST00000580357 HNRNPUQ00839 825 aaKnown RBP eCLIP20.92■□□□□ 0.94
IFT20-210ENST00000580357 ALDH1L2Q3SY69 923 aa20.92■□□□□ 0.94
IFT20-210ENST00000580357 RTKN2Q8IZC4 609 aa20.92■□□□□ 0.94
IFT20-210ENST00000580357 ADCY9O60503 1353 aa20.92■□□□□ 0.94
IFT20-210ENST00000580357 GOLGB1Q14789 3259 aaKnown RBP20.92■□□□□ 0.94
IFT20-210ENST00000580357 IRS4O14654 1257 aaPredicted RBP20.91■□□□□ 0.94
IFT20-210ENST00000580357 BBOX1O75936 387 aa20.91■□□□□ 0.94
IFT20-210ENST00000580357 SF3B3Q15393 1217 aaKnown RBP20.91■□□□□ 0.94
IFT20-210ENST00000580357 DDX46Q7L014 1031 aaKnown RBP20.91■□□□□ 0.94
IFT20-210ENST00000580357 SYNE4Q8N205 404 aa20.91■□□□□ 0.94
IFT20-210ENST00000580357 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
IFT20-210ENST00000580357 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
IFT20-210ENST00000580357 CEP350Q5VT06 3117 aa20.9■□□□□ 0.94
IFT20-210ENST00000580357 IGKV5-2P06315 115 aa20.9■□□□□ 0.94
IFT20-210ENST00000580357 LMNB1P20700 586 aa20.9■□□□□ 0.94
IFT20-210ENST00000580357 CCDC93Q567U6 631 aa20.9■□□□□ 0.94
IFT20-210ENST00000580357 C9orf131Q5VYM1 1079 aa20.9■□□□□ 0.94
IFT20-210ENST00000580357 LTBP3Q9NS15 1303 aa20.89■□□□□ 0.93
IFT20-210ENST00000580357 NEURL1BA8MQ27 555 aa20.89■□□□□ 0.93
IFT20-210ENST00000580357 ARFGEF2Q9Y6D5 1785 aa20.89■□□□□ 0.93
IFT20-210ENST00000580357 PDE8AO60658 829 aa20.88■□□□□ 0.93
IFT20-210ENST00000580357 TMC4Q7Z404 712 aa20.88■□□□□ 0.93
IFT20-210ENST00000580357 MRPL50Q8N5N7 158 aaKnown RBP20.88■□□□□ 0.93
IFT20-210ENST00000580357 PTPRCP08575 1304 aa20.87■□□□□ 0.93
IFT20-210ENST00000580357 CDHR2Q9BYE9 1310 aa20.87■□□□□ 0.93
IFT20-210ENST00000580357 RTL5Q5HYW3 569 aaPredicted RBP20.87■□□□□ 0.93
IFT20-210ENST00000580357 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
IFT20-210ENST00000580357 RNF181Q9P0P0 153 aa20.87■□□□□ 0.93
IFT20-210ENST00000580357 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
IFT20-210ENST00000580357 SLX4Q8IY92 1834 aa20.86■□□□□ 0.93
IFT20-210ENST00000580357 H7C1W4 665 aa20.86■□□□□ 0.93
IFT20-210ENST00000580357 NFKBIEO00221 500 aa20.86■□□□□ 0.93
IFT20-210ENST00000580357 GCKRQ14397 625 aa20.86■□□□□ 0.93
IFT20-210ENST00000580357 SSH1Q8WYL5 1049 aa20.86■□□□□ 0.93
IFT20-210ENST00000580357 TAOK3Q9H2K8 898 aa20.86■□□□□ 0.93
IFT20-210ENST00000580357 ZC3H4Q9UPT8 1303 aaKnown RBP20.85■□□□□ 0.93
IFT20-210ENST00000580357 PPEF1O14829 653 aaPredicted RBP20.85■□□□□ 0.93
IFT20-210ENST00000580357 FKBP4Q02790 459 aaKnown RBP eCLIP20.85■□□□□ 0.93
IFT20-210ENST00000580357 GRAPQ13588 217 aa20.85■□□□□ 0.93
IFT20-210ENST00000580357 CWF19L2Q2TBE0 894 aaKnown RBP20.85■□□□□ 0.93
IFT20-210ENST00000580357 GRAPLQ8TC17 118 aaPredicted RBP20.85■□□□□ 0.93
IFT20-210ENST00000580357 BRPF1P55201 1214 aaPredicted RBP20.84■□□□□ 0.93
IFT20-210ENST00000580357 RASSF7Q02833 373 aa20.84■□□□□ 0.93
IFT20-210ENST00000580357 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
IFT20-210ENST00000580357 BEND3Q5T5X7 828 aa20.84■□□□□ 0.93
IFT20-210ENST00000580357 SP8Q8IXZ3 490 aa20.84■□□□□ 0.93
IFT20-210ENST00000580357 GPBP1L1Q9HC44 474 aaPredicted RBP20.84■□□□□ 0.93
IFT20-210ENST00000580357 ATP6V0A2Q9Y487 856 aa20.84■□□□□ 0.93
IFT20-210ENST00000580357 ABCC4O15439 1325 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms