RNA–Protein interactions for RNA: ENST00000579796.1

ARHGAP28-211, Transcript of Rho GTPase activating protein 28, human

Gene ARHGAP28, Length 1,960 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-211	ENST00000579796	LRFN2	Q9ULH4	789 aa		11.23	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	CD109	Q6YHK3	1445 aa		11.23	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	SCTR	P47872	440 aa		11.23	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	HS2ST1	Q7LGA3	356 aa		11.23	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	NEUROD4	Q9HD90	331 aa		11.23	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	POLI	Q9UNA4	740 aa		11.23	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	NCOA2	Q15596	1464 aa		11.22	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	AMPD3	Q01432	767 aa		11.22	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	ALKBH2	Q6NS38	261 aa		11.22	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	GJD3	Q8N144	294 aa		11.22	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	DDX56	Q9NY93	547 aa	Known RBP	11.22	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	EPHA4	P54764	986 aa		11.21	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	CBLB	Q13191	982 aa		11.21	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	ORC1	Q13415	861 aa		11.21	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	ERFE	Q4G0M1	354 aa		11.21	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	KANSL2	Q9H9L4	492 aa		11.21	□□□□□ -0.61
ARHGAP28-211	ENST00000579796	DNAJC6	O75061	913 aa		11.21	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PRDM9	Q9NQV7	894 aa		11.21	□□□□□ -0.62
ARHGAP28-211	ENST00000579796		V9GY48	417 aa	Predicted RBP	11.21	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	DXO	O77932	396 aa	Known RBP	11.2	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	HOXB1	P14653	301 aa	Predicted RBP	11.2	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	NBPF20	Q3BBV1	942 aa		11.2	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	MEI1	Q5TIA1	1274 aa		11.2	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.2	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	ZNF408	Q9H9D4	720 aa		11.2	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	SPC25	Q9HBM1	224 aa		11.2	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	C4orf48	Q5BLP8	95 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	CKAP2L	Q8IYA6	745 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PMM1	Q92871	262 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	ITSN2	Q9NZM3	1697 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	SCNN1D	P51172	638 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	HSP90AB2P	Q58FF8	381 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	FAM160A2	Q8N612	972 aa	Predicted RBP	11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	GPRASP2	Q96D09	838 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	COPRS	Q9NQ92	184 aa		11.19	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	OPLAH	O14841	1288 aa		11.18	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	TBCEL	Q5QJ74	424 aa		11.18	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	UNC93B1	Q9H1C4	597 aa		11.18	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	QTRT2	Q9H974	415 aa	Known RBP	11.18	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	SAMD9L	Q8IVG5	1584 aa		11.18	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	ARHGAP5	Q13017	1502 aa		11.18	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PLCH2	O75038	1416 aa		11.18	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PCGF6	Q9BYE7	350 aa		11.17	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.17	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PHLDB1	Q86UU1	1377 aa		11.17	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PLEKHG4	Q58EX7	1191 aa		11.17	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	CSRNP1	Q96S65	589 aa		11.17	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	ARAP3	Q8WWN8	1544 aa		11.17	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	FANCA	O15360	1455 aa		11.17	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	MORC4	Q8TE76	937 aa		11.16	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	FBF1	Q8TES7	1133 aa		11.16	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	SRPK1	Q96SB4	655 aa	Known RBP	11.16	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	U2SURP	O15042	1029 aa	Known RBP	11.16	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PI16	Q6UXB8	463 aa		11.16	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	PRR12	Q9ULL5	1215 aa		11.16	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	FRMPD1	Q5SYB0	1578 aa		11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	CFAP74	Q9C0B2	1584 aa		11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	USP31	Q70CQ4	1352 aa		11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	TEX14	Q8IWB6	1497 aa		11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	FAM221B	A6H8Z2	402 aa		11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	EIF1AY	O14602	144 aa	Known RBP	11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	DNM1	Q05193	864 aa	Known RBP	11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	OSBPL7	Q9BZF2	842 aa		11.15	□□□□□ -0.62
ARHGAP28-211	ENST00000579796	RICTOR	Q6R327	1708 aa		11.15	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	CCNB3	Q8WWL7	1395 aa		11.15	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	KDM6B	O15054	1643 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	EIF4B	P23588	611 aa	Known RBP	11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	ETFB	P38117	255 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	NBPF6	Q5VWK0	638 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	POTEE	Q6S8J3	1075 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	FOXJ1	Q92949	421 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	MKL1	Q969V6	931 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	NBPF4	Q96M43	638 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	ARHGEF12	Q9NZN5	1544 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	S100B	P04271	92 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	MMP16	P51512	607 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	FMNL3	Q8IVF7	1028 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	SERTAD1	Q9UHV2	236 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	MRVI1	Q9Y6F6	885 aa		11.14	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	ABCC1	P33527	1531 aa		11.13	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	NEO1	Q92859	1461 aa		11.13	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	RAB15	P59190	212 aa		11.13	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	DMRTA1	Q5VZB9	504 aa		11.13	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	ZFR	Q96KR1	1074 aa	Known RBP	11.13	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	SNTG2	Q9NY99	539 aa		11.13	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	ZNF644	Q9H582	1327 aa	Predicted RBP	11.13	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	MYOM3	Q5VTT5	1437 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	AKNA	Q7Z591	1439 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	SYCP2	Q9BX26	1530 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	RASGRP4	Q8TDF6	673 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	PPP1R12B	O60237	982 aa	Predicted RBP	11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	GDF10	P55107	478 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	RASA3	Q14644	834 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	MSS51	Q4VC12	460 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	ERMP1	Q7Z2K6	904 aa		11.12	□□□□□ -0.63
ARHGAP28-211	ENST00000579796	ETFBKMT	Q8IXQ9	262 aa		11.12	□□□□□ -0.63

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