RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
BRIP1-204ENST00000579028 LMOD1P29536 600 aaPredicted RBP11.72□□□□□ -0.53
BRIP1-204ENST00000579028 SCNN1DP51172 638 aa11.72□□□□□ -0.53
BRIP1-204ENST00000579028 EIF6P56537 245 aaKnown RBP11.72□□□□□ -0.53
BRIP1-204ENST00000579028 FMR1Q06787 632 aaKnown RBP eCLIP11.72□□□□□ -0.53
BRIP1-204ENST00000579028 CC2D2BQ6DHV5 1058 aa11.72□□□□□ -0.53
BRIP1-204ENST00000579028 NIP7Q9Y221 180 aaKnown RBP eCLIP11.72□□□□□ -0.53
BRIP1-204ENST00000579028 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
BRIP1-204ENST00000579028 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.53
BRIP1-204ENST00000579028 CRY2Q49AN0 593 aa11.71□□□□□ -0.53
BRIP1-204ENST00000579028 CST9Q5W186 159 aa11.71□□□□□ -0.53
BRIP1-204ENST00000579028 CYP4F22Q6NT55 531 aa11.71□□□□□ -0.53
BRIP1-204ENST00000579028 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
BRIP1-204ENST00000579028 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
BRIP1-204ENST00000579028 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
BRIP1-204ENST00000579028 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
BRIP1-204ENST00000579028 MAP2K2P36507 400 aa11.7□□□□□ -0.54
BRIP1-204ENST00000579028 EPS15P42566 896 aa11.7□□□□□ -0.54
BRIP1-204ENST00000579028 NBPF10Q6P3W6 841 aaKnown RBP11.7□□□□□ -0.54
BRIP1-204ENST00000579028 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
BRIP1-204ENST00000579028 USP50Q70EL3 339 aaPredicted RBP11.7□□□□□ -0.54
BRIP1-204ENST00000579028 NBPF15Q8N660 670 aa11.7□□□□□ -0.54
BRIP1-204ENST00000579028 GJA3Q9Y6H8 435 aa11.7□□□□□ -0.54
BRIP1-204ENST00000579028 FAM177BA6PVY3 158 aa11.69□□□□□ -0.54
BRIP1-204ENST00000579028 TRAF5O00463 557 aa11.69□□□□□ -0.54
BRIP1-204ENST00000579028 CA12O43570 354 aa11.69□□□□□ -0.54
BRIP1-204ENST00000579028 HLFQ16534 295 aa11.69□□□□□ -0.54
BRIP1-204ENST00000579028 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
BRIP1-204ENST00000579028 RIC1Q4ADV7 1423 aa11.69□□□□□ -0.54
BRIP1-204ENST00000579028 ABCC12Q96J65 1359 aa11.68□□□□□ -0.54
BRIP1-204ENST00000579028 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
BRIP1-204ENST00000579028 GRM1Q13255 1194 aa11.68□□□□□ -0.54
BRIP1-204ENST00000579028 CC2D1BQ5T0F9 858 aaKnown RBP11.68□□□□□ -0.54
BRIP1-204ENST00000579028 HHIPL1Q96JK4 782 aa11.68□□□□□ -0.54
BRIP1-204ENST00000579028 MCOLN1Q9GZU1 580 aa11.68□□□□□ -0.54
BRIP1-204ENST00000579028 TSKSQ9UJT2 592 aa11.68□□□□□ -0.54
BRIP1-204ENST00000579028 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 AOC2O75106 756 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
BRIP1-204ENST00000579028 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
BRIP1-204ENST00000579028 SAPCD2Q86UD0 394 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 PHACTR3Q96KR7 559 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
BRIP1-204ENST00000579028 IBTKQ9P2D0 1353 aaPredicted RBP11.67□□□□□ -0.54
BRIP1-204ENST00000579028 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
BRIP1-204ENST00000579028 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
BRIP1-204ENST00000579028 POTEHQ6S545 545 aa11.66□□□□□ -0.54
BRIP1-204ENST00000579028 NIM1KQ8IY84 436 aa11.66□□□□□ -0.54
BRIP1-204ENST00000579028 RPGRQ92834 1020 aaKnown RBP11.66□□□□□ -0.54
BRIP1-204ENST00000579028 ADARB2Q9NS39 739 aaKnown RBP11.66□□□□□ -0.54
BRIP1-204ENST00000579028 GPRC5DQ9NZD1 345 aa11.66□□□□□ -0.54
BRIP1-204ENST00000579028 NUP98P52948 1817 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 CASP8AP2Q9UKL3 1982 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 ERVV-1B6SEH8 477 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 NUTM1Q86Y26 1132 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 PGAP2Q9UHJ9 254 aa11.65□□□□□ -0.54
BRIP1-204ENST00000579028 PPEF1O14829 653 aaPredicted RBP11.64□□□□□ -0.55
BRIP1-204ENST00000579028 CELF2O95319 508 aaKnown RBP11.64□□□□□ -0.55
BRIP1-204ENST00000579028 DGKZQ13574 1117 aa11.64□□□□□ -0.55
BRIP1-204ENST00000579028 SLC51AQ86UW1 340 aa11.64□□□□□ -0.55
BRIP1-204ENST00000579028 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
BRIP1-204ENST00000579028 MAP3K15Q6ZN16 1313 aa11.63□□□□□ -0.55
BRIP1-204ENST00000579028 PPIP5K2O43314 1243 aa11.63□□□□□ -0.55
BRIP1-204ENST00000579028 MCM10Q7L590 875 aa11.63□□□□□ -0.55
BRIP1-204ENST00000579028 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
BRIP1-204ENST00000579028 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
BRIP1-204ENST00000579028 GLIS2Q9BZE0 524 aaPredicted RBP11.63□□□□□ -0.55
BRIP1-204ENST00000579028 UBN2Q6ZU65 1347 aa11.62□□□□□ -0.55
BRIP1-204ENST00000579028 CDHR2Q9BYE9 1310 aa11.62□□□□□ -0.55
BRIP1-204ENST00000579028 HTATSF1O43719 755 aaKnown RBP11.62□□□□□ -0.55
BRIP1-204ENST00000579028 CXCL9Q07325 125 aa11.62□□□□□ -0.55
BRIP1-204ENST00000579028 AOC3Q16853 763 aa11.62□□□□□ -0.55
BRIP1-204ENST00000579028 CIAPIN1Q6FI81 312 aa11.62□□□□□ -0.55
BRIP1-204ENST00000579028 ZC3H15Q8WU90 426 aaKnown RBP11.62□□□□□ -0.55
BRIP1-204ENST00000579028 ZNRF3Q9ULT6 936 aa11.62□□□□□ -0.55
BRIP1-204ENST00000579028 NTSR2O95665 410 aa11.61□□□□□ -0.55
BRIP1-204ENST00000579028 GMPSP49915 693 aaPredicted RBP11.61□□□□□ -0.55
BRIP1-204ENST00000579028 NOGQ13253 232 aa11.61□□□□□ -0.55
BRIP1-204ENST00000579028 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
BRIP1-204ENST00000579028 TAF7Q15545 349 aaPredicted RBP11.61□□□□□ -0.55
BRIP1-204ENST00000579028 SUSD4Q5VX71 490 aa11.61□□□□□ -0.55
BRIP1-204ENST00000579028 RTFDC1Q9BY42 306 aaPredicted RBP11.61□□□□□ -0.55
BRIP1-204ENST00000579028 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
BRIP1-204ENST00000579028 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
BRIP1-204ENST00000579028 GPTP24298 496 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
BRIP1-204ENST00000579028 KIF6Q6ZMV9 814 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 TTLL7Q6ZT98 887 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 CDC37L1Q7L3B6 337 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 NGEFQ8N5V2 710 aa11.6□□□□□ -0.55
BRIP1-204ENST00000579028 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms