RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 POTECB2RU33 542 aa20.68■□□□□ 0.9
CRLF3-203ENST00000578692 HOXB7P09629 217 aa20.68■□□□□ 0.9
CRLF3-203ENST00000578692 HOXA10P31260 410 aaPredicted RBP20.68■□□□□ 0.9
CRLF3-203ENST00000578692 HSP90AB3PQ58FF7 597 aa20.68■□□□□ 0.9
CRLF3-203ENST00000578692 HDGFL1Q5TGJ6 251 aa20.68■□□□□ 0.9
CRLF3-203ENST00000578692 SMC1BQ8NDV3 1235 aa20.68■□□□□ 0.9
CRLF3-203ENST00000578692 UTP14AQ9BVJ6 771 aaKnown RBP20.68■□□□□ 0.9
CRLF3-203ENST00000578692 RIC1Q4ADV7 1423 aa20.68■□□□□ 0.9
CRLF3-203ENST00000578692 NLRP3Q96P20 1036 aa20.67■□□□□ 0.9
CRLF3-203ENST00000578692 CHPF2Q9P2E5 772 aa20.67■□□□□ 0.9
CRLF3-203ENST00000578692 CEP350Q5VT06 3117 aa20.67■□□□□ 0.9
CRLF3-203ENST00000578692 DDNO94850 711 aaPredicted RBP20.66■□□□□ 0.9
CRLF3-203ENST00000578692 TCIRG1Q13488 830 aa20.66■□□□□ 0.9
CRLF3-203ENST00000578692 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
CRLF3-203ENST00000578692 RBM17Q96I25 401 aaKnown RBP20.66■□□□□ 0.9
CRLF3-203ENST00000578692 CRAMP1Q96RY5 1269 aa20.66■□□□□ 0.9
CRLF3-203ENST00000578692 ZNF277Q9NRM2 450 aaPredicted RBP20.66■□□□□ 0.9
CRLF3-203ENST00000578692 MBIPQ9NS73 344 aa20.66■□□□□ 0.9
CRLF3-203ENST00000578692 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
CRLF3-203ENST00000578692 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
CRLF3-203ENST00000578692 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
CRLF3-203ENST00000578692 SYNE4Q8N205 404 aa20.65■□□□□ 0.9
CRLF3-203ENST00000578692 WDR90Q96KV7 1748 aa20.65■□□□□ 0.9
CRLF3-203ENST00000578692 DBF4Q9UBU7 674 aaPredicted RBP20.65■□□□□ 0.9
CRLF3-203ENST00000578692 GNAI1P63096 354 aa20.64■□□□□ 0.89
CRLF3-203ENST00000578692 CALD1Q05682 793 aaKnown RBP20.64■□□□□ 0.89
CRLF3-203ENST00000578692 NLRP10Q86W26 655 aa20.64■□□□□ 0.89
CRLF3-203ENST00000578692 CCDC184Q52MB2 194 aa20.63■□□□□ 0.89
CRLF3-203ENST00000578692 ANKRD13DQ6ZTN6 518 aa20.63■□□□□ 0.89
CRLF3-203ENST00000578692 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
CRLF3-203ENST00000578692 DNAJC5GQ8N7S2 189 aa20.63■□□□□ 0.89
CRLF3-203ENST00000578692 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
CRLF3-203ENST00000578692 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
CRLF3-203ENST00000578692 IARSP41252 1262 aaKnown RBP20.62■□□□□ 0.89
CRLF3-203ENST00000578692 GRIPAP1Q4V328 841 aa20.62■□□□□ 0.89
CRLF3-203ENST00000578692 PLBD2Q8NHP8 589 aa20.62■□□□□ 0.89
CRLF3-203ENST00000578692 PSMD1Q99460 953 aa20.62■□□□□ 0.89
CRLF3-203ENST00000578692 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
CRLF3-203ENST00000578692 TRMT112Q9UI30 125 aaKnown RBP20.61■□□□□ 0.89
CRLF3-203ENST00000578692 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
CRLF3-203ENST00000578692 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
CRLF3-203ENST00000578692 ZNF316A6NFI3 1004 aaPredicted RBP20.59■□□□□ 0.89
CRLF3-203ENST00000578692 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
CRLF3-203ENST00000578692 PPEF1O14829 653 aaPredicted RBP20.59■□□□□ 0.89
CRLF3-203ENST00000578692 HTRA3P83110 453 aa20.59■□□□□ 0.89
CRLF3-203ENST00000578692 SNED1Q8TER0 1413 aa20.59■□□□□ 0.89
CRLF3-203ENST00000578692 FZD9O00144 591 aa20.59■□□□□ 0.89
CRLF3-203ENST00000578692 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
CRLF3-203ENST00000578692 JDP2Q8WYK2 163 aa20.59■□□□□ 0.89
CRLF3-203ENST00000578692 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
CRLF3-203ENST00000578692 SH3TC1Q8TE82 1336 aa20.58■□□□□ 0.89
CRLF3-203ENST00000578692 IQCA1LA6NCM1 817 aa20.58■□□□□ 0.88
CRLF3-203ENST00000578692 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.88
CRLF3-203ENST00000578692 ZNF541Q9H0D2 1346 aa20.57■□□□□ 0.88
CRLF3-203ENST00000578692 ZNF428Q96B54 188 aa20.57■□□□□ 0.88
CRLF3-203ENST00000578692 ISCA1Q9BUE6 129 aa20.57■□□□□ 0.88
CRLF3-203ENST00000578692 ATP6V0A2Q9Y487 856 aa20.57■□□□□ 0.88
CRLF3-203ENST00000578692 ABCC4O15439 1325 aa20.56■□□□□ 0.88
CRLF3-203ENST00000578692 ATP5J2-PTCD1G3V325 749 aa20.56■□□□□ 0.88
CRLF3-203ENST00000578692 BBOX1O75936 387 aa20.56■□□□□ 0.88
CRLF3-203ENST00000578692 C8orf58Q8NAV2 365 aa20.56■□□□□ 0.88
CRLF3-203ENST00000578692 CHADLQ6NUI6 762 aa20.55■□□□□ 0.88
CRLF3-203ENST00000578692 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
CRLF3-203ENST00000578692 SLC51AQ86UW1 340 aa20.55■□□□□ 0.88
CRLF3-203ENST00000578692 KLRG1Q96E93 195 aa20.55■□□□□ 0.88
CRLF3-203ENST00000578692 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
CRLF3-203ENST00000578692 ANP32CO43423 234 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 POTEIP0CG38 1075 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 POTEJP0CG39 1038 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 SP8Q8IXZ3 490 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 FAM89AQ96GI7 184 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 TAF1DQ9H5J8 278 aaPredicted RBP20.54■□□□□ 0.88
CRLF3-203ENST00000578692 SCN4AP35499 1836 aa20.54■□□□□ 0.88
CRLF3-203ENST00000578692 EIF6P56537 245 aaKnown RBP20.53■□□□□ 0.88
CRLF3-203ENST00000578692 TRIM28Q13263 835 aaKnown RBP20.53■□□□□ 0.88
CRLF3-203ENST00000578692 CCDC27Q2M243 656 aa20.53■□□□□ 0.88
CRLF3-203ENST00000578692 GPC2Q8N158 579 aa20.53■□□□□ 0.88
CRLF3-203ENST00000578692 HACL1Q9UJ83 578 aa20.53■□□□□ 0.88
CRLF3-203ENST00000578692 LAMB2P55268 1798 aa20.53■□□□□ 0.88
CRLF3-203ENST00000578692 GOLGA2Q08379 1002 aa20.52■□□□□ 0.88
CRLF3-203ENST00000578692 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
CRLF3-203ENST00000578692 VPS33BQ9H267 617 aa20.52■□□□□ 0.88
CRLF3-203ENST00000578692 MRS2Q9HD23 443 aa20.52■□□□□ 0.88
CRLF3-203ENST00000578692 GRAPQ13588 217 aa20.51■□□□□ 0.87
CRLF3-203ENST00000578692 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
CRLF3-203ENST00000578692 GRAPLQ8TC17 118 aaPredicted RBP20.51■□□□□ 0.87
CRLF3-203ENST00000578692 PPIP5K2O43314 1243 aa20.5■□□□□ 0.87
CRLF3-203ENST00000578692 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
CRLF3-203ENST00000578692 LDHDQ86WU2 507 aa20.5■□□□□ 0.87
CRLF3-203ENST00000578692 MPNDQ8N594 471 aa20.5■□□□□ 0.87
CRLF3-203ENST00000578692 TSPYL6Q8N831 410 aa20.5■□□□□ 0.87
CRLF3-203ENST00000578692 SUPT20HQ8NEM7 779 aa20.5■□□□□ 0.87
CRLF3-203ENST00000578692 GJA3Q9Y6H8 435 aa20.5■□□□□ 0.87
CRLF3-203ENST00000578692 EPHX2P34913 555 aa20.49■□□□□ 0.87
CRLF3-203ENST00000578692 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
CRLF3-203ENST00000578692 EAPPQ56P03 285 aaPredicted RBP20.49■□□□□ 0.87
CRLF3-203ENST00000578692 DPP8Q6V1X1 898 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms