RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 HLFQ16534 295 aa16.79■□□□□ 0.28
SRSF1-202ENST00000578430 TRAPPC3LQ5T215 181 aa16.79■□□□□ 0.28
SRSF1-202ENST00000578430 CEP85Q6P2H3 762 aa16.79■□□□□ 0.28
SRSF1-202ENST00000578430 ANKRD36CQ5JPF3 1778 aa16.79■□□□□ 0.28
SRSF1-202ENST00000578430 BCORQ6W2J9 1755 aa16.79■□□□□ 0.28
SRSF1-202ENST00000578430 NUP98P52948 1817 aa16.78■□□□□ 0.28
SRSF1-202ENST00000578430 H7C1W4 665 aa16.78■□□□□ 0.28
SRSF1-202ENST00000578430 NBPF7P0C2Y1 421 aaPredicted RBP16.78■□□□□ 0.28
SRSF1-202ENST00000578430 PARP10Q53GL7 1025 aa16.78■□□□□ 0.28
SRSF1-202ENST00000578430 ZNF34Q8IZ26 560 aa16.78■□□□□ 0.28
SRSF1-202ENST00000578430 C1orf115Q9H7X2 142 aa16.78■□□□□ 0.28
SRSF1-202ENST00000578430 ZPR1O75312 459 aa16.77■□□□□ 0.28
SRSF1-202ENST00000578430 ATP8B2P98198 1209 aa16.77■□□□□ 0.28
SRSF1-202ENST00000578430 LRRFIP2Q9Y608 721 aaKnown RBP16.77■□□□□ 0.28
SRSF1-202ENST00000578430 SCN7AQ01118 1682 aa16.77■□□□□ 0.28
SRSF1-202ENST00000578430 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
SRSF1-202ENST00000578430 IGHDP01880 384 aa16.76■□□□□ 0.27
SRSF1-202ENST00000578430 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-202ENST00000578430 RFC4P35249 363 aa16.76■□□□□ 0.27
SRSF1-202ENST00000578430 MTX1Q13505 466 aa16.76■□□□□ 0.27
SRSF1-202ENST00000578430 NLRP10Q86W26 655 aa16.76■□□□□ 0.27
SRSF1-202ENST00000578430 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
SRSF1-202ENST00000578430 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
SRSF1-202ENST00000578430 CASP7P55210 303 aa16.75■□□□□ 0.27
SRSF1-202ENST00000578430 SIRT2Q8IXJ6 389 aa16.75■□□□□ 0.27
SRSF1-202ENST00000578430 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
SRSF1-202ENST00000578430 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
SRSF1-202ENST00000578430 GCC1Q96CN9 775 aa16.75■□□□□ 0.27
SRSF1-202ENST00000578430 USP42Q9H9J4 1324 aaKnown RBP16.74■□□□□ 0.27
SRSF1-202ENST00000578430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
SRSF1-202ENST00000578430 HSP90B1P14625 803 aaKnown RBP16.74■□□□□ 0.27
SRSF1-202ENST00000578430 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
SRSF1-202ENST00000578430 PPP1R42Q7Z4L9 355 aa16.74■□□□□ 0.27
SRSF1-202ENST00000578430 CDHR2Q9BYE9 1310 aa16.73■□□□□ 0.27
SRSF1-202ENST00000578430 GPTP24298 496 aa16.73■□□□□ 0.27
SRSF1-202ENST00000578430 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
SRSF1-202ENST00000578430 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
SRSF1-202ENST00000578430 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
SRSF1-202ENST00000578430 SUCLG2Q96I99 432 aa16.73■□□□□ 0.27
SRSF1-202ENST00000578430 NIP7Q9Y221 180 aaKnown RBP eCLIP16.73■□□□□ 0.27
SRSF1-202ENST00000578430 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-202ENST00000578430 PLA2G12BQ9BX93 195 aa16.72■□□□□ 0.27
SRSF1-202ENST00000578430 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
SRSF1-202ENST00000578430 TFCP2L1Q9NZI6 479 aa16.72■□□□□ 0.27
SRSF1-202ENST00000578430 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
SRSF1-202ENST00000578430 UBN2Q6ZU65 1347 aa16.71■□□□□ 0.27
SRSF1-202ENST00000578430 PHF14O94880 888 aa16.71■□□□□ 0.27
SRSF1-202ENST00000578430 POLA2Q14181 598 aa16.71■□□□□ 0.27
SRSF1-202ENST00000578430 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
SRSF1-202ENST00000578430 KAZALD1Q96I82 304 aa16.71■□□□□ 0.27
SRSF1-202ENST00000578430 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
SRSF1-202ENST00000578430 DCTPP1Q9H773 170 aa16.71■□□□□ 0.27
SRSF1-202ENST00000578430 TRMT112Q9UI30 125 aaKnown RBP16.71■□□□□ 0.27
SRSF1-202ENST00000578430 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
SRSF1-202ENST00000578430 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
SRSF1-202ENST00000578430 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
SRSF1-202ENST00000578430 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
SRSF1-202ENST00000578430 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
SRSF1-202ENST00000578430 SRP68Q9UHB9 627 aaKnown RBP16.7■□□□□ 0.26
SRSF1-202ENST00000578430 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
SRSF1-202ENST00000578430 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
SRSF1-202ENST00000578430 KCNA4P22459 653 aa16.69■□□□□ 0.26
SRSF1-202ENST00000578430 SUSD4Q5VX71 490 aa16.69■□□□□ 0.26
SRSF1-202ENST00000578430 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
SRSF1-202ENST00000578430 FOXO4P98177 505 aa16.68■□□□□ 0.26
SRSF1-202ENST00000578430 HSP90AB4PQ58FF6 505 aa16.68■□□□□ 0.26
SRSF1-202ENST00000578430 TBC1D9BQ66K14 1250 aa16.68■□□□□ 0.26
SRSF1-202ENST00000578430 PELP1Q8IZL8 1130 aaKnown RBP16.68■□□□□ 0.26
SRSF1-202ENST00000578430 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
SRSF1-202ENST00000578430 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
SRSF1-202ENST00000578430 PDE8AO60658 829 aa16.67■□□□□ 0.26
SRSF1-202ENST00000578430 NTSR2O95665 410 aa16.67■□□□□ 0.26
SRSF1-202ENST00000578430 GYS1P13807 737 aa16.67■□□□□ 0.26
SRSF1-202ENST00000578430 SLC15A2Q16348 729 aa16.67■□□□□ 0.26
SRSF1-202ENST00000578430 SMIM5Q71RC9 77 aa16.67■□□□□ 0.26
SRSF1-202ENST00000578430 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
SRSF1-202ENST00000578430 CARMIL3Q8ND23 1372 aa16.66■□□□□ 0.26
SRSF1-202ENST00000578430 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
SRSF1-202ENST00000578430 YY1P25490 414 aa16.66■□□□□ 0.26
SRSF1-202ENST00000578430 COL24A1Q17RW2 1714 aa16.66■□□□□ 0.26
SRSF1-202ENST00000578430 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
SRSF1-202ENST00000578430 LMBR1LQ6UX01 489 aa16.66■□□□□ 0.26
SRSF1-202ENST00000578430 JARID2Q92833 1246 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-202ENST00000578430 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
SRSF1-202ENST00000578430 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-202ENST00000578430 ZBTB47Q9UFB7 747 aaPredicted RBP16.66■□□□□ 0.26
SRSF1-202ENST00000578430 NOP58Q9Y2X3 529 aaKnown RBP16.66■□□□□ 0.26
SRSF1-202ENST00000578430 CSF1RP07333 972 aa16.65■□□□□ 0.26
SRSF1-202ENST00000578430 NUCB1Q02818 461 aa16.65■□□□□ 0.26
SRSF1-202ENST00000578430 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
SRSF1-202ENST00000578430 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
SRSF1-202ENST00000578430 NLGN1Q8N2Q7 840 aa16.65■□□□□ 0.26
SRSF1-202ENST00000578430 TUBGCP6Q96RT7 1819 aa16.64■□□□□ 0.25
SRSF1-202ENST00000578430 SLC10A5Q5PT55 438 aa16.64■□□□□ 0.25
SRSF1-202ENST00000578430 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
SRSF1-202ENST00000578430 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
SRSF1-202ENST00000578430 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
SRSF1-202ENST00000578430 PNPLA7Q6ZV29 1317 aa16.64■□□□□ 0.25
SRSF1-202ENST00000578430 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
SRSF1-202ENST00000578430 SURF6O75683 361 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms