RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 TAF1DQ9H5J8 278 aaPredicted RBP5.92□□□□□ -1.46
PPP4R1-209ENST00000578329 ADAMTS8Q9UP79 889 aa5.92□□□□□ -1.46
PPP4R1-209ENST00000578329 SCN4AP35499 1836 aa5.92□□□□□ -1.46
PPP4R1-209ENST00000578329 SHTN1A0MZ66 631 aa5.91□□□□□ -1.46
PPP4R1-209ENST00000578329 SCNN1DP51172 638 aa5.91□□□□□ -1.46
PPP4R1-209ENST00000578329 RIPK4P57078 832 aa5.91□□□□□ -1.46
PPP4R1-209ENST00000578329 TPTE2Q6XPS3 522 aa5.91□□□□□ -1.46
PPP4R1-209ENST00000578329 NLRP10Q86W26 655 aa5.91□□□□□ -1.46
PPP4R1-209ENST00000578329 PDZRN3Q9UPQ7 1066 aa5.91□□□□□ -1.46
PPP4R1-209ENST00000578329 WTIPA6NIX2 430 aaPredicted RBP5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 YDJCA8MPS7 323 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 HCLS1P14317 486 aaPredicted RBP5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 IARSP41252 1262 aaKnown RBP5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 ST5P78524 1137 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 RALBP1Q15311 655 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 CCDC93Q567U6 631 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 CHADLQ6NUI6 762 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 DLK2Q6UY11 383 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 COPS6Q7L5N1 327 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 XAGE3Q8WTP9 111 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 NECTIN2Q92692 538 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 CRAMP1Q96RY5 1269 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 PSMD1Q99460 953 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 ISCA1Q9BUE6 129 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 PRKRIP1Q9H875 184 aaPredicted RBP5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 TSPYL4Q9UJ04 414 aa5.9□□□□□ -1.46
PPP4R1-209ENST00000578329 ABCC4O15439 1325 aa5.9□□□□□ -1.47
PPP4R1-209ENST00000578329 ERBB4Q15303 1308 aa5.9□□□□□ -1.47
PPP4R1-209ENST00000578329 RNF123Q5XPI4 1314 aa5.9□□□□□ -1.47
PPP4R1-209ENST00000578329 MYBBP1AQ9BQG0 1328 aaKnown RBP5.9□□□□□ -1.47
PPP4R1-209ENST00000578329 ZNF646O15015 1829 aaPredicted RBP5.9□□□□□ -1.47
PPP4R1-209ENST00000578329 SCN9AQ15858 1988 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 THSD7BQ9C0I4 1608 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 EIF2S2P20042 333 aaKnown RBP5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 EPS15P42566 896 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 HIRAP54198 1017 aaPredicted RBP5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 CST9Q5W186 159 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 MAP1SQ66K74 1059 aaPredicted RBP5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 PNISRQ8TF01 805 aaKnown RBP5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 RTFDC1Q9BY42 306 aaPredicted RBP5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 MBIPQ9NS73 344 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 BABAM1Q9NWV8 329 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 CHPF2Q9P2E5 772 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 ZNF652Q9Y2D9 606 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 CNTNAP1P78357 1384 aa5.89□□□□□ -1.47
PPP4R1-209ENST00000578329 TRAF5O00463 557 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 TCERG1O14776 1098 aaKnown RBP5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 EGFRP00533 1210 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 HSPA1AP0DMV8 641 aaKnown RBP5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 HSPA1BP0DMV9 641 aaKnown RBP5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 EPHX2P34913 555 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 VEGFBP49765 207 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 CXCL9Q07325 125 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 TCIRG1Q13488 830 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 TSPYL6Q8N831 410 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 C8orf58Q8NAV2 365 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 KCNQ5Q9NR82 932 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 CREBZFQ9NS37 354 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 MKRN1Q9UHC7 482 aaKnown RBP5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 ATP6V0A2Q9Y487 856 aa5.88□□□□□ -1.47
PPP4R1-209ENST00000578329 ATP5J2-PTCD1G3V325 749 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 APAF1O14727 1248 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 PPEF1O14829 653 aaPredicted RBP5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 FOXN1O15353 648 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 AIMP1Q12904 312 aaKnown RBP5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 NEUROD2Q15784 382 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 AOC3Q16853 763 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 SOGA3Q5TF21 947 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 DPY19L2Q6NUT2 758 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 LDHDQ86WU2 507 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 C16orf71Q8IYS4 520 aaPredicted RBP5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 RTKN2Q8IZC4 609 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 GPC2Q8N158 579 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 CELF1Q92879 486 aaKnown RBP5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 RUNDC1Q96C34 613 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 GPR101Q96P66 508 aaPredicted RBP5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 UTP14AQ9BVJ6 771 aaKnown RBP5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 PHAXQ9H814 394 aaKnown RBP5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 RTL9Q8NET4 1388 aa5.87□□□□□ -1.47
PPP4R1-209ENST00000578329 MAPK8IP3Q9UPT6 1336 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 ALDH1B1P30837 517 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 TRIM28Q13263 835 aaKnown RBP5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 SF3B3Q15393 1217 aaKnown RBP5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 PARP10Q53GL7 1025 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 DUSP27Q5VZP5 1158 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 KIF6Q6ZMV9 814 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 G2E3Q7L622 706 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 CNTROBQ8N137 903 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 TRPM4Q8TD43 1214 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 JARID2Q92833 1246 aaPredicted RBP5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 FAM89AQ96GI7 184 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 CFAP44Q96MT7 982 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 ZIC5Q96T25 663 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 NYXQ9GZU5 481 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 SEC31BQ9NQW1 1179 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 POLLQ9UGP5 575 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 PGAP2Q9UHJ9 254 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 HACL1Q9UJ83 578 aa5.86□□□□□ -1.47
PPP4R1-209ENST00000578329 ASTN2O75129 1339 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms