RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 OLFM4Q6UX06 510 aa26.74■■□□□ 1.87
LIMD2-202ENST00000578061 SBF1O95248 1867 aa26.73■■□□□ 1.87
LIMD2-202ENST00000578061 CRY2Q49AN0 593 aa26.73■■□□□ 1.87
LIMD2-202ENST00000578061 TCERG1O14776 1098 aaKnown RBP26.72■■□□□ 1.87
LIMD2-202ENST00000578061 NCBP3Q53F19 620 aaKnown RBP26.72■■□□□ 1.87
LIMD2-202ENST00000578061 SYNE4Q8N205 404 aa26.72■■□□□ 1.87
LIMD2-202ENST00000578061 C7orf43Q8WVR3 580 aa26.72■■□□□ 1.87
LIMD2-202ENST00000578061 IL16Q14005 1332 aa26.71■■□□□ 1.87
LIMD2-202ENST00000578061 ATP5J2-PTCD1G3V325 749 aa26.71■■□□□ 1.87
LIMD2-202ENST00000578061 RPGRQ92834 1020 aaKnown RBP26.71■■□□□ 1.87
LIMD2-202ENST00000578061 TRMT112Q9UI30 125 aaKnown RBP26.71■■□□□ 1.87
LIMD2-202ENST00000578061 ALDH1B1P30837 517 aa26.7■■□□□ 1.86
LIMD2-202ENST00000578061 CCDC30Q5VVM6 783 aa26.7■■□□□ 1.86
LIMD2-202ENST00000578061 TAOK3Q9H2K8 898 aa26.7■■□□□ 1.86
LIMD2-202ENST00000578061 NMRK2Q9NPI5 230 aa26.7■■□□□ 1.86
LIMD2-202ENST00000578061 ANKRD36CQ5JPF3 1778 aa26.7■■□□□ 1.86
LIMD2-202ENST00000578061 ARFGEF2Q9Y6D5 1785 aa26.69■■□□□ 1.86
LIMD2-202ENST00000578061 HCLS1P14317 486 aaPredicted RBP26.69■■□□□ 1.86
LIMD2-202ENST00000578061 RIC1Q4ADV7 1423 aa26.69■■□□□ 1.86
LIMD2-202ENST00000578061 SOGA3Q5TF21 947 aa26.69■■□□□ 1.86
LIMD2-202ENST00000578061 RIC3Q7Z5B4 369 aa26.69■■□□□ 1.86
LIMD2-202ENST00000578061 FANCIQ9NVI1 1328 aa26.68■■□□□ 1.86
LIMD2-202ENST00000578061 KIF3CO14782 793 aa26.68■■□□□ 1.86
LIMD2-202ENST00000578061 GOLGA2Q08379 1002 aa26.68■■□□□ 1.86
LIMD2-202ENST00000578061 TWISTNBQ3B726 338 aaPredicted RBP26.68■■□□□ 1.86
LIMD2-202ENST00000578061 CCDC93Q567U6 631 aa26.68■■□□□ 1.86
LIMD2-202ENST00000578061 SLC10A5Q5PT55 438 aa26.68■■□□□ 1.86
LIMD2-202ENST00000578061 WDR63Q8IWG1 891 aa26.68■■□□□ 1.86
LIMD2-202ENST00000578061 NLRP3Q96P20 1036 aa26.68■■□□□ 1.86
LIMD2-202ENST00000578061 ISCA1Q9BUE6 129 aa26.67■■□□□ 1.86
LIMD2-202ENST00000578061 FER1L6Q2WGJ9 1857 aa26.66■■□□□ 1.86
LIMD2-202ENST00000578061 HOXA10P31260 410 aaPredicted RBP26.66■■□□□ 1.86
LIMD2-202ENST00000578061 SLC51AQ86UW1 340 aa26.66■■□□□ 1.86
LIMD2-202ENST00000578061 RBM17Q96I25 401 aaKnown RBP26.66■■□□□ 1.86
LIMD2-202ENST00000578061 SPINK5Q9NQ38 1064 aaPredicted RBP26.66■■□□□ 1.86
LIMD2-202ENST00000578061 SH3TC1Q8TE82 1336 aa26.65■■□□□ 1.86
LIMD2-202ENST00000578061 RNF123Q5XPI4 1314 aa26.65■■□□□ 1.86
LIMD2-202ENST00000578061 LTBP3Q9NS15 1303 aa26.65■■□□□ 1.86
LIMD2-202ENST00000578061 RTL5Q5HYW3 569 aaPredicted RBP26.64■■□□□ 1.86
LIMD2-202ENST00000578061 MYD88Q99836 296 aa26.64■■□□□ 1.86
LIMD2-202ENST00000578061 CHMP4AQ9BY43 222 aa26.64■■□□□ 1.86
LIMD2-202ENST00000578061 CCDC88AQ3V6T2 1871 aa26.64■■□□□ 1.85
LIMD2-202ENST00000578061 KDM2BQ8NHM5 1336 aa26.64■■□□□ 1.85
LIMD2-202ENST00000578061 FAM89AQ96GI7 184 aa26.63■■□□□ 1.85
LIMD2-202ENST00000578061 CRAMP1Q96RY5 1269 aa26.63■■□□□ 1.85
LIMD2-202ENST00000578061 STK31Q9BXU1 1019 aa26.63■■□□□ 1.85
LIMD2-202ENST00000578061 EXOSC9Q06265 439 aaKnown RBP26.62■■□□□ 1.85
LIMD2-202ENST00000578061 RRAGCQ9HB90 399 aa26.62■■□□□ 1.85
LIMD2-202ENST00000578061 ZNF277Q9NRM2 450 aaPredicted RBP26.62■■□□□ 1.85
LIMD2-202ENST00000578061 ZC3H4Q9UPT8 1303 aaKnown RBP26.62■■□□□ 1.85
LIMD2-202ENST00000578061 TIAM2Q8IVF5 1701 aa26.62■■□□□ 1.85
LIMD2-202ENST00000578061 FKBP4Q02790 459 aaKnown RBP eCLIP26.61■■□□□ 1.85
LIMD2-202ENST00000578061 RTKN2Q8IZC4 609 aa26.61■■□□□ 1.85
LIMD2-202ENST00000578061 PPEF1O14829 653 aaPredicted RBP26.6■■□□□ 1.85
LIMD2-202ENST00000578061 G2E3Q7L622 706 aa26.6■■□□□ 1.85
LIMD2-202ENST00000578061 GLTPD2A6NH11 291 aa26.59■■□□□ 1.85
LIMD2-202ENST00000578061 DDX58O95786 925 aaKnown RBP26.59■■□□□ 1.85
LIMD2-202ENST00000578061 SLC4A2P04920 1241 aa26.59■■□□□ 1.85
LIMD2-202ENST00000578061 MAP3K2Q9Y2U5 619 aa26.59■■□□□ 1.85
LIMD2-202ENST00000578061 ABCC4O15439 1325 aa26.59■■□□□ 1.85
LIMD2-202ENST00000578061 TRIM28Q13263 835 aaKnown RBP26.58■■□□□ 1.85
LIMD2-202ENST00000578061 METTL22Q9BUU2 404 aaPredicted RBP26.57■■□□□ 1.84
LIMD2-202ENST00000578061 PI4KAP2A4QPH2 592 aa26.56■■□□□ 1.84
LIMD2-202ENST00000578061 VAMP4O75379 141 aa26.56■■□□□ 1.84
LIMD2-202ENST00000578061 KSR2Q6VAB6 950 aa26.56■■□□□ 1.84
LIMD2-202ENST00000578061 PI4KAP1Q8N8J0 262 aa26.56■■□□□ 1.84
LIMD2-202ENST00000578061 JARID2Q92833 1246 aaPredicted RBP26.56■■□□□ 1.84
LIMD2-202ENST00000578061 MYH16Q9H6N6 1097 aa26.56■■□□□ 1.84
LIMD2-202ENST00000578061 LAMB2P55268 1798 aa26.56■■□□□ 1.84
LIMD2-202ENST00000578061 IRS4O14654 1257 aaPredicted RBP26.55■■□□□ 1.84
LIMD2-202ENST00000578061 DDX46Q7L014 1031 aaKnown RBP26.55■■□□□ 1.84
LIMD2-202ENST00000578061 SNED1Q8TER0 1413 aa26.55■■□□□ 1.84
LIMD2-202ENST00000578061 CC2D2BQ6DHV5 1058 aa26.54■■□□□ 1.84
LIMD2-202ENST00000578061 DPY19L2Q6NUT2 758 aa26.54■■□□□ 1.84
LIMD2-202ENST00000578061 C16orf71Q8IYS4 520 aaPredicted RBP26.54■■□□□ 1.84
LIMD2-202ENST00000578061 TOMM70O94826 608 aa26.53■■□□□ 1.84
LIMD2-202ENST00000578061 CWC25Q9NXE8 425 aaPredicted RBP26.53■■□□□ 1.84
LIMD2-202ENST00000578061 ZNF521Q96K83 1311 aa26.53■■□□□ 1.84
LIMD2-202ENST00000578061 DDX60Q8IY21 1712 aaKnown RBP26.53■■□□□ 1.84
LIMD2-202ENST00000578061 DICER1Q9UPY3 1922 aaKnown RBP26.53■■□□□ 1.84
LIMD2-202ENST00000578061 IARSP41252 1262 aaKnown RBP26.52■■□□□ 1.84
LIMD2-202ENST00000578061 ZBTB38Q8NAP3 1195 aaPredicted RBP26.52■■□□□ 1.84
LIMD2-202ENST00000578061 CCDC191Q8NCU4 936 aa26.52■■□□□ 1.84
LIMD2-202ENST00000578061 PSMD1Q99460 953 aa26.52■■□□□ 1.84
LIMD2-202ENST00000578061 ATP6V0A2Q9Y487 856 aa26.52■■□□□ 1.84
LIMD2-202ENST00000578061 DDNO94850 711 aaPredicted RBP26.51■■□□□ 1.83
LIMD2-202ENST00000578061 FLIIQ13045 1269 aa26.51■■□□□ 1.83
LIMD2-202ENST00000578061 GRAPQ13588 217 aa26.51■■□□□ 1.83
LIMD2-202ENST00000578061 GRAPLQ8TC17 118 aaPredicted RBP26.51■■□□□ 1.83
LIMD2-202ENST00000578061 TMX4Q9H1E5 349 aaPredicted RBP26.51■■□□□ 1.83
LIMD2-202ENST00000578061 CCER2I3L3R5 266 aa26.5■■□□□ 1.83
LIMD2-202ENST00000578061 BBOX1O75936 387 aa26.5■■□□□ 1.83
LIMD2-202ENST00000578061 IGKV5-2P06315 115 aa26.5■■□□□ 1.83
LIMD2-202ENST00000578061 SF3B3Q15393 1217 aaKnown RBP26.5■■□□□ 1.83
LIMD2-202ENST00000578061 PCCAP05165 728 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-202ENST00000578061 VEGFAP15692 232 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-202ENST00000578061 FKBP5Q13451 457 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-202ENST00000578061 CWF19L2Q2TBE0 894 aaKnown RBP26.49■■□□□ 1.83
LIMD2-202ENST00000578061 ZNF541Q9H0D2 1346 aa26.48■■□□□ 1.83
LIMD2-202ENST00000578061 POTECB2RU33 542 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 538 ms