RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
MKS1-206ENST00000577824 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
MKS1-206ENST00000577824 ANKRD31Q8N7Z5 1873 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 ATP5J2-PTCD1G3V325 749 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 SERPINB2P05120 415 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 CCT4P50991 539 aaKnown RBP16.1■□□□□ 0.17
MKS1-206ENST00000577824 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
MKS1-206ENST00000577824 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
MKS1-206ENST00000577824 PRR5LQ6MZQ0 368 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 PPP1R42Q7Z4L9 355 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
MKS1-206ENST00000577824 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 CWC25Q9NXE8 425 aaPredicted RBP16.1■□□□□ 0.17
MKS1-206ENST00000577824 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
MKS1-206ENST00000577824 PARP3Q9Y6F1 533 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 UTYO14607 1347 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
MKS1-206ENST00000577824 GCKRQ14397 625 aa16.09■□□□□ 0.17
MKS1-206ENST00000577824 BICDL1Q6ZP65 573 aa16.09■□□□□ 0.17
MKS1-206ENST00000577824 DZIP1LQ8IYY4 767 aaKnown RBP16.09■□□□□ 0.17
MKS1-206ENST00000577824 ZBTB38Q8NAP3 1195 aaPredicted RBP16.09■□□□□ 0.17
MKS1-206ENST00000577824 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
MKS1-206ENST00000577824 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.17
MKS1-206ENST00000577824 PCCAP05165 728 aaPredicted RBP16.08■□□□□ 0.16
MKS1-206ENST00000577824 MS4A1P11836 297 aa16.08■□□□□ 0.16
MKS1-206ENST00000577824 RLBP1P12271 317 aa16.08■□□□□ 0.16
MKS1-206ENST00000577824 CASP7P55210 303 aa16.08■□□□□ 0.16
MKS1-206ENST00000577824 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
MKS1-206ENST00000577824 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.16
MKS1-206ENST00000577824 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
MKS1-206ENST00000577824 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
MKS1-206ENST00000577824 CNBD1Q8NA66 436 aa16.08■□□□□ 0.16
MKS1-206ENST00000577824 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
MKS1-206ENST00000577824 COL11A2P13942 1736 aaPredicted RBP16.08■□□□□ 0.16
MKS1-206ENST00000577824 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
MKS1-206ENST00000577824 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
MKS1-206ENST00000577824 H7C1W4 665 aa16.06■□□□□ 0.16
MKS1-206ENST00000577824 SLC10A5Q5PT55 438 aa16.06■□□□□ 0.16
MKS1-206ENST00000577824 TMEM57Q8N5G2 664 aa16.06■□□□□ 0.16
MKS1-206ENST00000577824 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
MKS1-206ENST00000577824 KLRG2A4D1S0 409 aaPredicted RBP16.05■□□□□ 0.16
MKS1-206ENST00000577824 GRM8O00222 908 aa16.05■□□□□ 0.16
MKS1-206ENST00000577824 PLIN1O60240 522 aa16.05■□□□□ 0.16
MKS1-206ENST00000577824 ST5P78524 1137 aa16.05■□□□□ 0.16
MKS1-206ENST00000577824 CLUAP1Q96AJ1 413 aa16.05■□□□□ 0.16
MKS1-206ENST00000577824 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
MKS1-206ENST00000577824 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
MKS1-206ENST00000577824 NUTM1Q86Y26 1132 aa16.04■□□□□ 0.16
MKS1-206ENST00000577824 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
MKS1-206ENST00000577824 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
MKS1-206ENST00000577824 PLA2G12BQ9BX93 195 aa16.04■□□□□ 0.16
MKS1-206ENST00000577824 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
MKS1-206ENST00000577824 MYH3P11055 1940 aa16.04■□□□□ 0.16
MKS1-206ENST00000577824 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
MKS1-206ENST00000577824 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
MKS1-206ENST00000577824 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
MKS1-206ENST00000577824 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
MKS1-206ENST00000577824 CD2APQ9Y5K6 639 aa16.03■□□□□ 0.16
MKS1-206ENST00000577824 BRCA1P38398 1863 aaKnown RBP16.02■□□□□ 0.16
MKS1-206ENST00000577824 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
MKS1-206ENST00000577824 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.16
MKS1-206ENST00000577824 PANK1Q8TE04 598 aa16.02■□□□□ 0.16
MKS1-206ENST00000577824 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
MKS1-206ENST00000577824 IRS4O14654 1257 aaPredicted RBP16.01■□□□□ 0.15
MKS1-206ENST00000577824 NBPF7P0C2Y1 421 aaPredicted RBP16.01■□□□□ 0.15
MKS1-206ENST00000577824 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
MKS1-206ENST00000577824 C9orf78Q9NZ63 289 aaPredicted RBP16.01■□□□□ 0.15
MKS1-206ENST00000577824 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
MKS1-206ENST00000577824 RTL9Q8NET4 1388 aa16■□□□□ 0.15
MKS1-206ENST00000577824 PDE6BP35913 854 aa16■□□□□ 0.15
MKS1-206ENST00000577824 TGFB2P61812 414 aa16■□□□□ 0.15
MKS1-206ENST00000577824 ITPRIPQ8IWB1 547 aa16■□□□□ 0.15
MKS1-206ENST00000577824 MEIS3Q99687 375 aa16■□□□□ 0.15
MKS1-206ENST00000577824 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
MKS1-206ENST00000577824 UTRNP46939 3433 aa16■□□□□ 0.15
MKS1-206ENST00000577824 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
MKS1-206ENST00000577824 NPHP1O15259 732 aa15.99■□□□□ 0.15
MKS1-206ENST00000577824 PDE8AO60658 829 aa15.99■□□□□ 0.15
MKS1-206ENST00000577824 GNAI3P08754 354 aa15.99■□□□□ 0.15
MKS1-206ENST00000577824 GTF2E1P29083 439 aaPredicted RBP15.99■□□□□ 0.15
MKS1-206ENST00000577824 SF3B3Q15393 1217 aaKnown RBP15.99■□□□□ 0.15
MKS1-206ENST00000577824 RABL6Q3YEC7 729 aaPredicted RBP15.99■□□□□ 0.15
MKS1-206ENST00000577824 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
MKS1-206ENST00000577824 UBTFL1P0CB47 393 aaPredicted RBP15.98■□□□□ 0.15
MKS1-206ENST00000577824 SRGNP10124 158 aa15.98■□□□□ 0.15
MKS1-206ENST00000577824 HCLS1P14317 486 aaPredicted RBP15.98■□□□□ 0.15
MKS1-206ENST00000577824 CTSWP56202 376 aa15.98■□□□□ 0.15
MKS1-206ENST00000577824 C3orf67Q6ZVT6 689 aa15.98■□□□□ 0.15
MKS1-206ENST00000577824 CCDC24Q8N4L8 307 aa15.98■□□□□ 0.15
MKS1-206ENST00000577824 SUCLG2Q96I99 432 aa15.98■□□□□ 0.15
MKS1-206ENST00000577824 HDAC5Q9UQL6 1122 aa15.98■□□□□ 0.15
MKS1-206ENST00000577824 CSF1RP07333 972 aa15.97■□□□□ 0.15
MKS1-206ENST00000577824 HOXA10P31260 410 aaPredicted RBP15.97■□□□□ 0.15
MKS1-206ENST00000577824 FOXO4P98177 505 aa15.97■□□□□ 0.15
MKS1-206ENST00000577824 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
MKS1-206ENST00000577824 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
MKS1-206ENST00000577824 FHDC1Q9C0D6 1143 aaPredicted RBP15.97■□□□□ 0.15
MKS1-206ENST00000577824 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
MKS1-206ENST00000577824 LRRC37AA6NMS7 1700 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 255.5 ms