RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 PRPF40BQ6NWY9 871 aaKnown RBP25.08■■□□□ 1.61
NUP85-205ENST00000577561 STK31Q9BXU1 1019 aa25.08■■□□□ 1.61
NUP85-205ENST00000577561 C21orf2O43822 256 aa25.07■■□□□ 1.6
NUP85-205ENST00000577561 EXOSC9Q06265 439 aaKnown RBP25.07■■□□□ 1.6
NUP85-205ENST00000577561 RIC3Q7Z5B4 369 aa25.07■■□□□ 1.6
NUP85-205ENST00000577561 ISCA1Q9BUE6 129 aa25.07■■□□□ 1.6
NUP85-205ENST00000577561 SLC10A5Q5PT55 438 aa25.06■■□□□ 1.6
NUP85-205ENST00000577561 TNRC6CQ9HCJ0 1690 aaKnown RBP25.06■■□□□ 1.6
NUP85-205ENST00000577561 SLX4Q8IY92 1834 aa25.05■■□□□ 1.6
NUP85-205ENST00000577561 VAMP4O75379 141 aa25.05■■□□□ 1.6
NUP85-205ENST00000577561 TRIM28Q13263 835 aaKnown RBP25.05■■□□□ 1.6
NUP85-205ENST00000577561 C9orf131Q5VYM1 1079 aa25.05■■□□□ 1.6
NUP85-205ENST00000577561 ZNF219Q9P2Y4 722 aaPredicted RBP25.05■■□□□ 1.6
NUP85-205ENST00000577561 TRMT112Q9UI30 125 aaKnown RBP25.05■■□□□ 1.6
NUP85-205ENST00000577561 ATP5J2-PTCD1G3V325 749 aa25.04■■□□□ 1.6
NUP85-205ENST00000577561 TCERG1O14776 1098 aaKnown RBP25.04■■□□□ 1.6
NUP85-205ENST00000577561 DDX58O95786 925 aaKnown RBP25.04■■□□□ 1.6
NUP85-205ENST00000577561 ALDH1B1P30837 517 aa25.04■■□□□ 1.6
NUP85-205ENST00000577561 ARFGEF2Q9Y6D5 1785 aa25.03■■□□□ 1.6
NUP85-205ENST00000577561 RASSF7Q02833 373 aa25.03■■□□□ 1.6
NUP85-205ENST00000577561 C7orf43Q8WVR3 580 aa25.03■■□□□ 1.6
NUP85-205ENST00000577561 NLRP3Q96P20 1036 aa25.03■■□□□ 1.6
NUP85-205ENST00000577561 SH3TC1Q8TE82 1336 aa25.03■■□□□ 1.6
NUP85-205ENST00000577561 NFKBIEO00221 500 aa25.02■■□□□ 1.6
NUP85-205ENST00000577561 SLC4A2P04920 1241 aa25.02■■□□□ 1.6
NUP85-205ENST00000577561 HOXA10P31260 410 aaPredicted RBP25.02■■□□□ 1.6
NUP85-205ENST00000577561 SOGA3Q5TF21 947 aa25.02■■□□□ 1.6
NUP85-205ENST00000577561 C3orf67Q6ZVT6 689 aa25.02■■□□□ 1.6
NUP85-205ENST00000577561 MIER1Q8N108 512 aa25.02■■□□□ 1.6
NUP85-205ENST00000577561 SYNE4Q8N205 404 aa25.02■■□□□ 1.6
NUP85-205ENST00000577561 RPGRQ92834 1020 aaKnown RBP25.02■■□□□ 1.6
NUP85-205ENST00000577561 RNF181Q9P0P0 153 aa25.01■■□□□ 1.59
NUP85-205ENST00000577561 SBF1O95248 1867 aa25■■□□□ 1.59
NUP85-205ENST00000577561 CACNA1SQ13698 1873 aa25■■□□□ 1.59
NUP85-205ENST00000577561 LMNB1P20700 586 aa25■■□□□ 1.59
NUP85-205ENST00000577561 KSR2Q6VAB6 950 aa25■■□□□ 1.59
NUP85-205ENST00000577561 METTL22Q9BUU2 404 aaPredicted RBP25■■□□□ 1.59
NUP85-205ENST00000577561 HCLS1P14317 486 aaPredicted RBP24.99■■□□□ 1.59
NUP85-205ENST00000577561 G2E3Q7L622 706 aa24.99■■□□□ 1.59
NUP85-205ENST00000577561 ZNF428Q96B54 188 aa24.99■■□□□ 1.59
NUP85-205ENST00000577561 RBM17Q96I25 401 aaKnown RBP24.99■■□□□ 1.59
NUP85-205ENST00000577561 MYD88Q99836 296 aa24.99■■□□□ 1.59
NUP85-205ENST00000577561 MAP3K2Q9Y2U5 619 aa24.99■■□□□ 1.59
NUP85-205ENST00000577561 PI4KAP2A4QPH2 592 aa24.98■■□□□ 1.59
NUP85-205ENST00000577561 PRELPP51888 382 aa24.98■■□□□ 1.59
NUP85-205ENST00000577561 PI4KAP1Q8N8J0 262 aa24.98■■□□□ 1.59
NUP85-205ENST00000577561 CRAMP1Q96RY5 1269 aa24.98■■□□□ 1.59
NUP85-205ENST00000577561 FER1L6Q2WGJ9 1857 aa24.98■■□□□ 1.59
NUP85-205ENST00000577561 LTBP3Q9NS15 1303 aa24.97■■□□□ 1.59
NUP85-205ENST00000577561 E9PSI1 815 aa24.97■■□□□ 1.59
NUP85-205ENST00000577561 CCDC93Q567U6 631 aa24.97■■□□□ 1.59
NUP85-205ENST00000577561 FAM89AQ96GI7 184 aa24.97■■□□□ 1.59
NUP85-205ENST00000577561 GPBP1L1Q9HC44 474 aaPredicted RBP24.97■■□□□ 1.59
NUP85-205ENST00000577561 FLIIQ13045 1269 aa24.96■■□□□ 1.59
NUP85-205ENST00000577561 CCDC191Q8NCU4 936 aa24.96■■□□□ 1.59
NUP85-205ENST00000577561 ZNF526Q8TF50 670 aaPredicted RBP24.96■■□□□ 1.59
NUP85-205ENST00000577561 TAOK3Q9H2K8 898 aa24.96■■□□□ 1.59
NUP85-205ENST00000577561 CACNA1FO60840 1977 aa24.96■■□□□ 1.59
NUP85-205ENST00000577561 SLFN5Q08AF3 891 aa24.94■■□□□ 1.58
NUP85-205ENST00000577561 OLFM4Q6UX06 510 aa24.94■■□□□ 1.58
NUP85-205ENST00000577561 ZBTB38Q8NAP3 1195 aaPredicted RBP24.94■■□□□ 1.58
NUP85-205ENST00000577561 CWC25Q9NXE8 425 aaPredicted RBP24.94■■□□□ 1.58
NUP85-205ENST00000577561 ZC3H4Q9UPT8 1303 aaKnown RBP24.93■■□□□ 1.58
NUP85-205ENST00000577561 RTKN2Q8IZC4 609 aa24.93■■□□□ 1.58
NUP85-205ENST00000577561 NEXNQ0ZGT2 675 aa24.92■■□□□ 1.58
NUP85-205ENST00000577561 RTL5Q5HYW3 569 aaPredicted RBP24.92■■□□□ 1.58
NUP85-205ENST00000577561 CC2D2BQ6DHV5 1058 aa24.92■■□□□ 1.58
NUP85-205ENST00000577561 LAMB2P55268 1798 aa24.91■■□□□ 1.58
NUP85-205ENST00000577561 IRS4O14654 1257 aaPredicted RBP24.91■■□□□ 1.58
NUP85-205ENST00000577561 PPEF1O14829 653 aaPredicted RBP24.91■■□□□ 1.58
NUP85-205ENST00000577561 PCCAP05165 728 aaPredicted RBP24.91■■□□□ 1.58
NUP85-205ENST00000577561 IGKV5-2P06315 115 aa24.91■■□□□ 1.58
NUP85-205ENST00000577561 FKBP5Q13451 457 aaPredicted RBP24.91■■□□□ 1.58
NUP85-205ENST00000577561 CCDC88AQ3V6T2 1871 aa24.91■■□□□ 1.58
NUP85-205ENST00000577561 ABCC4O15439 1325 aa24.9■■□□□ 1.58
NUP85-205ENST00000577561 DDX60Q8IY21 1712 aaKnown RBP24.9■■□□□ 1.58
NUP85-205ENST00000577561 FKBP4Q02790 459 aaKnown RBP eCLIP24.9■■□□□ 1.58
NUP85-205ENST00000577561 SF3B3Q15393 1217 aaKnown RBP24.9■■□□□ 1.58
NUP85-205ENST00000577561 DDX46Q7L014 1031 aaKnown RBP24.9■■□□□ 1.58
NUP85-205ENST00000577561 CDCA7LQ96GN5 454 aa24.9■■□□□ 1.58
NUP85-205ENST00000577561 HSP90B1P14625 803 aaKnown RBP24.89■■□□□ 1.58
NUP85-205ENST00000577561 SNED1Q8TER0 1413 aa24.88■■□□□ 1.57
NUP85-205ENST00000577561 BBOX1O75936 387 aa24.88■■□□□ 1.57
NUP85-205ENST00000577561 GRIPAP1Q4V328 841 aa24.88■■□□□ 1.57
NUP85-205ENST00000577561 TRMT2AQ8IZ69 625 aaKnown RBP24.88■■□□□ 1.57
NUP85-205ENST00000577561 DNAAF4Q8WXU2 420 aa24.88■■□□□ 1.57
NUP85-205ENST00000577561 NEURL1BA8MQ27 555 aa24.87■■□□□ 1.57
NUP85-205ENST00000577561 PSMD1Q99460 953 aa24.87■■□□□ 1.57
NUP85-205ENST00000577561 ATP6V0A2Q9Y487 856 aa24.87■■□□□ 1.57
NUP85-205ENST00000577561 GRAPQ13588 217 aa24.86■■□□□ 1.57
NUP85-205ENST00000577561 CWF19L2Q2TBE0 894 aaKnown RBP24.86■■□□□ 1.57
NUP85-205ENST00000577561 GRAPLQ8TC17 118 aaPredicted RBP24.86■■□□□ 1.57
NUP85-205ENST00000577561 DICER1Q9UPY3 1922 aaKnown RBP24.86■■□□□ 1.57
NUP85-205ENST00000577561 KDM2BQ8NHM5 1336 aa24.86■■□□□ 1.57
NUP85-205ENST00000577561 JARID2Q92833 1246 aaPredicted RBP24.85■■□□□ 1.57
NUP85-205ENST00000577561 TMX4Q9H1E5 349 aaPredicted RBP24.85■■□□□ 1.57
NUP85-205ENST00000577561 ZNF277Q9NRM2 450 aaPredicted RBP24.85■■□□□ 1.57
NUP85-205ENST00000577561 CDHR2Q9BYE9 1310 aa24.85■■□□□ 1.57
NUP85-205ENST00000577561 SLC51AQ86UW1 340 aa24.84■■□□□ 1.57
NUP85-205ENST00000577561 LINS1Q8NG48 757 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms