RNA–Protein interactions for RNA: ENST00000576532.1

CCNE1-206, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-206ENST00000576532 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
CCNE1-206ENST00000576532 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
CCNE1-206ENST00000576532 C9orf78Q9NZ63 289 aaPredicted RBP13.18□□□□□ -0.3
CCNE1-206ENST00000576532 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
CCNE1-206ENST00000576532 HDAC5Q9UQL6 1122 aa13.18□□□□□ -0.3
CCNE1-206ENST00000576532 BTAF1O14981 1849 aa13.18□□□□□ -0.3
CCNE1-206ENST00000576532 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
CCNE1-206ENST00000576532 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
CCNE1-206ENST00000576532 ATP10DQ9P241 1426 aa13.16□□□□□ -0.3
CCNE1-206ENST00000576532 GPTP24298 496 aa13.16□□□□□ -0.3
CCNE1-206ENST00000576532 PARP10Q53GL7 1025 aa13.16□□□□□ -0.3
CCNE1-206ENST00000576532 NLRP10Q86W26 655 aa13.16□□□□□ -0.3
CCNE1-206ENST00000576532 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
CCNE1-206ENST00000576532 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCNE1-206ENST00000576532 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
CCNE1-206ENST00000576532 H7C1W4 665 aa13.15□□□□□ -0.3
CCNE1-206ENST00000576532 GRM8O00222 908 aa13.15□□□□□ -0.3
CCNE1-206ENST00000576532 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
CCNE1-206ENST00000576532 GYS1P13807 737 aa13.15□□□□□ -0.3
CCNE1-206ENST00000576532 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.3
CCNE1-206ENST00000576532 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
CCNE1-206ENST00000576532 MEIS3Q99687 375 aa13.15□□□□□ -0.3
CCNE1-206ENST00000576532 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
CCNE1-206ENST00000576532 IBTKQ9P2D0 1353 aaPredicted RBP13.15□□□□□ -0.3
CCNE1-206ENST00000576532 EP400Q96L91 3159 aa13.15□□□□□ -0.3
CCNE1-206ENST00000576532 ZNF831Q5JPB2 1677 aa13.15□□□□□ -0.31
CCNE1-206ENST00000576532 UTYO14607 1347 aa13.14□□□□□ -0.31
CCNE1-206ENST00000576532 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
CCNE1-206ENST00000576532 GNAI2P04899 355 aa13.14□□□□□ -0.31
CCNE1-206ENST00000576532 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
CCNE1-206ENST00000576532 TBC1D9BQ66K14 1250 aa13.14□□□□□ -0.31
CCNE1-206ENST00000576532 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
CCNE1-206ENST00000576532 PPP1R42Q7Z4L9 355 aa13.14□□□□□ -0.31
CCNE1-206ENST00000576532 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
CCNE1-206ENST00000576532 UTP14AQ9BVJ6 771 aaKnown RBP13.14□□□□□ -0.31
CCNE1-206ENST00000576532 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
CCNE1-206ENST00000576532 C5P01031 1676 aa13.14□□□□□ -0.31
CCNE1-206ENST00000576532 PCCAP05165 728 aaPredicted RBP13.13□□□□□ -0.31
CCNE1-206ENST00000576532 SUSD4Q5VX71 490 aa13.13□□□□□ -0.31
CCNE1-206ENST00000576532 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
CCNE1-206ENST00000576532 SBF2Q86WG5 1849 aa13.13□□□□□ -0.31
CCNE1-206ENST00000576532 TJP1Q07157 1748 aa13.13□□□□□ -0.31
CCNE1-206ENST00000576532 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
CCNE1-206ENST00000576532 TM4SF1P30408 202 aa13.12□□□□□ -0.31
CCNE1-206ENST00000576532 NFIXQ14938 502 aa13.12□□□□□ -0.31
CCNE1-206ENST00000576532 TPTE2Q6XPS3 522 aa13.12□□□□□ -0.31
CCNE1-206ENST00000576532 JARID2Q92833 1246 aaPredicted RBP13.12□□□□□ -0.31
CCNE1-206ENST00000576532 FAM89AQ96GI7 184 aa13.12□□□□□ -0.31
CCNE1-206ENST00000576532 CICQ96RK0 1608 aaPredicted RBP13.12□□□□□ -0.31
CCNE1-206ENST00000576532 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
CCNE1-206ENST00000576532 FAM177BA6PVY3 158 aa13.11□□□□□ -0.31
CCNE1-206ENST00000576532 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
CCNE1-206ENST00000576532 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
CCNE1-206ENST00000576532 CASP7P55210 303 aa13.11□□□□□ -0.31
CCNE1-206ENST00000576532 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
CCNE1-206ENST00000576532 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
CCNE1-206ENST00000576532 RPAP2Q8IXW5 612 aaPredicted RBP13.11□□□□□ -0.31
CCNE1-206ENST00000576532 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
CCNE1-206ENST00000576532 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
CCNE1-206ENST00000576532 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
CCNE1-206ENST00000576532 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
CCNE1-206ENST00000576532 KAT6BQ8WYB5 2073 aa13.1□□□□□ -0.31
CCNE1-206ENST00000576532 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
CCNE1-206ENST00000576532 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
CCNE1-206ENST00000576532 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
CCNE1-206ENST00000576532 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
CCNE1-206ENST00000576532 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
CCNE1-206ENST00000576532 LY75O60449 1722 aa13.1□□□□□ -0.31
CCNE1-206ENST00000576532 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
CCNE1-206ENST00000576532 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
CCNE1-206ENST00000576532 NTSR2O95665 410 aa13.09□□□□□ -0.31
CCNE1-206ENST00000576532 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
CCNE1-206ENST00000576532 SLC10A5Q5PT55 438 aa13.09□□□□□ -0.31
CCNE1-206ENST00000576532 CCDC136Q96JN2 1154 aa13.09□□□□□ -0.31
CCNE1-206ENST00000576532 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
CCNE1-206ENST00000576532 LAMB4A4D0S4 1761 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
CCNE1-206ENST00000576532 NPHP1O15259 732 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 SERPINB2P05120 415 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 R3HDM1Q15032 1099 aaKnown RBP13.08□□□□□ -0.32
CCNE1-206ENST00000576532 SYNE4Q8N205 404 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 ANKRD44Q8N8A2 993 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 CDHR2Q9BYE9 1310 aa13.08□□□□□ -0.32
CCNE1-206ENST00000576532 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
CCNE1-206ENST00000576532 PDE8AO60658 829 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 MMP10P09238 476 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 FOXO4P98177 505 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 ERFEQ4G0M1 354 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 PLA2G12BQ9BX93 195 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 PDGFDQ9GZP0 370 aaPredicted RBP13.07□□□□□ -0.32
CCNE1-206ENST00000576532 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
CCNE1-206ENST00000576532 PARP3Q9Y6F1 533 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
CCNE1-206ENST00000576532 RREB1Q92766 1687 aa13.06□□□□□ -0.32
CCNE1-206ENST00000576532 POLRMTO00411 1230 aaKnown RBP13.06□□□□□ -0.32
CCNE1-206ENST00000576532 HMMRO75330 724 aa13.06□□□□□ -0.32
CCNE1-206ENST00000576532 HCLS1P14317 486 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms