RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
SCARF1-209ENST00000576012 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-209ENST00000576012 SIL1Q9H173 461 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-209ENST00000576012 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-209ENST00000576012 GUCY1B3Q02153 619 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 PTPN21Q16825 1174 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 NDUFB9Q9Y6M9 179 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 NEURL4Q96JN8 1562 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 PPLO60437 1756 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 USHBP1Q8N6Y0 703 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 LEO1Q8WVC0 666 aaPredicted RBP17.16■□□□□ 0.34
SCARF1-209ENST00000576012 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
SCARF1-209ENST00000576012 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 H3BQV1 296 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-209ENST00000576012 AMPHP49418 695 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 PAXBP1Q9Y5B6 917 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 ISM2Q6H9L7 571 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 LRRC8AQ8IWT6 810 aa17.15■□□□□ 0.34
SCARF1-209ENST00000576012 EDC3Q96F86 508 aaKnown RBP17.15■□□□□ 0.34
SCARF1-209ENST00000576012 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
SCARF1-209ENST00000576012 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
SCARF1-209ENST00000576012 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
SCARF1-209ENST00000576012 CHGBP05060 677 aa17.13■□□□□ 0.33
SCARF1-209ENST00000576012 CREB3L3Q68CJ9 461 aa17.13■□□□□ 0.33
SCARF1-209ENST00000576012 RBM6P78332 1123 aaKnown RBP17.13■□□□□ 0.33
SCARF1-209ENST00000576012 AACSQ86V21 672 aa17.13■□□□□ 0.33
SCARF1-209ENST00000576012 PLA2G4DQ86XP0 818 aa17.13■□□□□ 0.33
SCARF1-209ENST00000576012 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
SCARF1-209ENST00000576012 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
SCARF1-209ENST00000576012 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
SCARF1-209ENST00000576012 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-209ENST00000576012 PIK3C2BO00750 1634 aa17.12■□□□□ 0.33
SCARF1-209ENST00000576012 GABPB1Q06547 395 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-209ENST00000576012 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
SCARF1-209ENST00000576012 CERS3Q8IU89 383 aa17.12■□□□□ 0.33
SCARF1-209ENST00000576012 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
SCARF1-209ENST00000576012 BIN1O00499 593 aa17.12■□□□□ 0.33
SCARF1-209ENST00000576012 NMIQ13287 307 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-209ENST00000576012 SYT10Q6XYQ8 523 aa17.12■□□□□ 0.33
SCARF1-209ENST00000576012 EPC1Q9H2F5 836 aa17.12■□□□□ 0.33
SCARF1-209ENST00000576012 MORC2Q9Y6X9 1032 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-209ENST00000576012 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 SSH3Q8TE77 659 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 BRF1Q92994 677 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 CLSTN2Q9H4D0 955 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 SSH2Q76I76 1423 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 AOPEPQ8N6M6 819 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-209ENST00000576012 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
SCARF1-209ENST00000576012 SH2B1Q9NRF2 756 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-209ENST00000576012 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
SCARF1-209ENST00000576012 SMC2O95347 1197 aa17.1■□□□□ 0.33
SCARF1-209ENST00000576012 KLHDC4Q8TBB5 520 aa17.1■□□□□ 0.33
SCARF1-209ENST00000576012 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
SCARF1-209ENST00000576012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-209ENST00000576012 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
SCARF1-209ENST00000576012 SCAND2PQ9GZW5 306 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-209ENST00000576012 CCDC66A2RUB6 948 aa17.09■□□□□ 0.33
SCARF1-209ENST00000576012 GLRX3O76003 335 aaKnown RBP17.09■□□□□ 0.33
SCARF1-209ENST00000576012 NEK11Q8NG66 645 aa17.09■□□□□ 0.33
SCARF1-209ENST00000576012 EYA1Q99502 592 aa17.09■□□□□ 0.33
SCARF1-209ENST00000576012 NOL10Q9BSC4 688 aaKnown RBP17.09■□□□□ 0.33
SCARF1-209ENST00000576012 DDX19AQ9NUU7 478 aaKnown RBP17.09■□□□□ 0.33
SCARF1-209ENST00000576012 ZNF446Q9NWS9 450 aa17.09■□□□□ 0.33
SCARF1-209ENST00000576012 CPS1P31327 1500 aa17.09■□□□□ 0.33
SCARF1-209ENST00000576012 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-209ENST00000576012 MYO5BQ9ULV0 1848 aa17.09■□□□□ 0.33
SCARF1-209ENST00000576012 SLC27A2O14975 620 aa17.08■□□□□ 0.33
SCARF1-209ENST00000576012 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.33
SCARF1-209ENST00000576012 ZCCHC17Q9NP64 241 aaKnown RBP17.08■□□□□ 0.33
SCARF1-209ENST00000576012 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.33
SCARF1-209ENST00000576012 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.33
SCARF1-209ENST00000576012 A0A0D9SFI3 127 aa17.08■□□□□ 0.32
SCARF1-209ENST00000576012 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.32
SCARF1-209ENST00000576012 TLR7Q9NYK1 1049 aaKnown RBP17.08■□□□□ 0.32
SCARF1-209ENST00000576012 CCDC171Q6TFL3 1326 aa17.08■□□□□ 0.32
SCARF1-209ENST00000576012 SLU7O95391 586 aaKnown RBP17.08■□□□□ 0.32
SCARF1-209ENST00000576012 CCT2P78371 535 aaKnown RBP17.08■□□□□ 0.32
SCARF1-209ENST00000576012 CRB1P82279 1406 aa17.08■□□□□ 0.32
SCARF1-209ENST00000576012 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
SCARF1-209ENST00000576012 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
SCARF1-209ENST00000576012 ACEP12821 1306 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 GOLGA8FQ08AF8 430 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 GOLGA8DPQ0D2H9 430 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
SCARF1-209ENST00000576012 ARHGAP29Q52LW3 1261 aa17.07■□□□□ 0.32
SCARF1-209ENST00000576012 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
SCARF1-209ENST00000576012 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms