RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 NEURL1BA8MQ27 555 aa10.87□□□□□ -0.67
NUP88-211ENST00000575976 PLIN1O60240 522 aa10.87□□□□□ -0.67
NUP88-211ENST00000575976 TRIM27P14373 513 aa10.87□□□□□ -0.67
NUP88-211ENST00000575976 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
NUP88-211ENST00000575976 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
NUP88-211ENST00000575976 CLUAP1Q96AJ1 413 aa10.87□□□□□ -0.67
NUP88-211ENST00000575976 NTSR2O95665 410 aa10.86□□□□□ -0.67
NUP88-211ENST00000575976 PRR5LQ6MZQ0 368 aa10.86□□□□□ -0.67
NUP88-211ENST00000575976 TPTE2Q6XPS3 522 aa10.86□□□□□ -0.67
NUP88-211ENST00000575976 PPP1R42Q7Z4L9 355 aa10.86□□□□□ -0.67
NUP88-211ENST00000575976 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
NUP88-211ENST00000575976 NUTM1Q86Y26 1132 aa10.86□□□□□ -0.67
NUP88-211ENST00000575976 CCDC191Q8NCU4 936 aa10.86□□□□□ -0.67
NUP88-211ENST00000575976 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
NUP88-211ENST00000575976 CWC25Q9NXE8 425 aaPredicted RBP10.86□□□□□ -0.67
NUP88-211ENST00000575976 ABCC4O15439 1325 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 NPHP1O15259 732 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 GRIN3BO60391 1043 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
NUP88-211ENST00000575976 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 NYXQ9GZU5 481 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 TRMT112Q9UI30 125 aaKnown RBP10.85□□□□□ -0.67
NUP88-211ENST00000575976 ANKRD36CQ5JPF3 1778 aa10.85□□□□□ -0.67
NUP88-211ENST00000575976 RLBP1P12271 317 aa10.84□□□□□ -0.67
NUP88-211ENST00000575976 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 CCT4P50991 539 aaKnown RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 GCKRQ14397 625 aa10.84□□□□□ -0.67
NUP88-211ENST00000575976 RTL5Q5HYW3 569 aaPredicted RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 INTS3Q68E01 1043 aaKnown RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 DZIP1LQ8IYY4 767 aaKnown RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 TMEM57Q8N5G2 664 aa10.84□□□□□ -0.67
NUP88-211ENST00000575976 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 ZBTB38Q8NAP3 1195 aaPredicted RBP10.84□□□□□ -0.67
NUP88-211ENST00000575976 FAM89AQ96GI7 184 aa10.84□□□□□ -0.67
NUP88-211ENST00000575976 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
NUP88-211ENST00000575976 PXDNLA1KZ92 1463 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 IBTKQ9P2D0 1353 aaPredicted RBP10.83□□□□□ -0.68
NUP88-211ENST00000575976 H7C1W4 665 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 PCCAP05165 728 aaPredicted RBP10.83□□□□□ -0.68
NUP88-211ENST00000575976 HSPA6P17066 643 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.68
NUP88-211ENST00000575976 ST5P78524 1137 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 KLHL34Q8N239 644 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 SUPT16HQ9Y5B9 1047 aaKnown RBP10.83□□□□□ -0.68
NUP88-211ENST00000575976 AFDNP55196 1824 aaKnown RBP10.83□□□□□ -0.68
NUP88-211ENST00000575976 NRXN2Q9P2S2 1712 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 RNF123Q5XPI4 1314 aa10.83□□□□□ -0.68
NUP88-211ENST00000575976 ABCC12Q96J65 1359 aa10.82□□□□□ -0.68
NUP88-211ENST00000575976 GRM8O00222 908 aa10.82□□□□□ -0.68
NUP88-211ENST00000575976 HCLS1P14317 486 aaPredicted RBP10.82□□□□□ -0.68
NUP88-211ENST00000575976 CASP7P55210 303 aa10.82□□□□□ -0.68
NUP88-211ENST00000575976 SLC10A5Q5PT55 438 aa10.82□□□□□ -0.68
NUP88-211ENST00000575976 C20orf194Q5TEA3 1177 aa10.82□□□□□ -0.68
NUP88-211ENST00000575976 FTSJ3Q8IY81 847 aaKnown RBP10.82□□□□□ -0.68
NUP88-211ENST00000575976 BRIP1Q9BX63 1249 aa10.82□□□□□ -0.68
NUP88-211ENST00000575976 C10orf71Q711Q0 1435 aa10.82□□□□□ -0.68
NUP88-211ENST00000575976 IRS4O14654 1257 aaPredicted RBP10.81□□□□□ -0.68
NUP88-211ENST00000575976 MS4A1P11836 297 aa10.81□□□□□ -0.68
NUP88-211ENST00000575976 UBE3BQ7Z3V4 1068 aa10.81□□□□□ -0.68
NUP88-211ENST00000575976 USP44Q9H0E7 712 aa10.81□□□□□ -0.68
NUP88-211ENST00000575976 GPBP1L1Q9HC44 474 aaPredicted RBP10.81□□□□□ -0.68
NUP88-211ENST00000575976 C9orf78Q9NZ63 289 aaPredicted RBP10.81□□□□□ -0.68
NUP88-211ENST00000575976 CD2APQ9Y5K6 639 aa10.81□□□□□ -0.68
NUP88-211ENST00000575976 CDHR2Q9BYE9 1310 aa10.81□□□□□ -0.68
NUP88-211ENST00000575976 NBPF7P0C2Y1 421 aaPredicted RBP10.8□□□□□ -0.68
NUP88-211ENST00000575976 PDE3AQ14432 1141 aa10.8□□□□□ -0.68
NUP88-211ENST00000575976 C3orf67Q6ZVT6 689 aa10.8□□□□□ -0.68
NUP88-211ENST00000575976 COG6Q9Y2V7 657 aa10.8□□□□□ -0.68
NUP88-211ENST00000575976 UTYO14607 1347 aa10.8□□□□□ -0.68
NUP88-211ENST00000575976 KLRG2A4D1S0 409 aaPredicted RBP10.79□□□□□ -0.68
NUP88-211ENST00000575976 PDE8AO60658 829 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 CHRNA5P30532 468 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 PDE6BP35913 854 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 TGFB2P61812 414 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 C2CD5Q86YS7 1000 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 ITPRIPQ8IWB1 547 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 NLGN2Q8NFZ4 835 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 SUCLG2Q96I99 432 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 MEIS3Q99687 375 aa10.79□□□□□ -0.68
NUP88-211ENST00000575976 RIC1Q4ADV7 1423 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 A0A0G2JLW4 131 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
NUP88-211ENST00000575976 CAPN15O75808 1086 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 CENPBP07199 599 aaPredicted RBP10.78□□□□□ -0.68
NUP88-211ENST00000575976 DPEP1P16444 411 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 KCNA3P22001 575 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 MVPQ14764 893 aaKnown RBP10.78□□□□□ -0.68
NUP88-211ENST00000575976 EPHA10Q5JZY3 1008 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 KAZALD1Q96I82 304 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 PLA2G12BQ9BX93 195 aa10.78□□□□□ -0.68
NUP88-211ENST00000575976 GOLGB1Q14789 3259 aaKnown RBP10.77□□□□□ -0.68
NUP88-211ENST00000575976 ANKRD31Q8N7Z5 1873 aa10.77□□□□□ -0.69
NUP88-211ENST00000575976 TNRC6CQ9HCJ0 1690 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms