RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
RPAIN-216ENST00000575599 ABCC12Q96J65 1359 aa17.08■□□□□ 0.32
RPAIN-216ENST00000575599 TNRC6CQ9HCJ0 1690 aaKnown RBP17.07■□□□□ 0.32
RPAIN-216ENST00000575599 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 PARP10Q53GL7 1025 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 ARHGAP27Q6ZUM4 889 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 TTLL6Q8N841 843 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
RPAIN-216ENST00000575599 IBTKQ9P2D0 1353 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-216ENST00000575599 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
RPAIN-216ENST00000575599 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
RPAIN-216ENST00000575599 ERFEQ4G0M1 354 aa17.06■□□□□ 0.32
RPAIN-216ENST00000575599 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
RPAIN-216ENST00000575599 PPP1R42Q7Z4L9 355 aa17.06■□□□□ 0.32
RPAIN-216ENST00000575599 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
RPAIN-216ENST00000575599 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
RPAIN-216ENST00000575599 NTSR2O95665 410 aa17.05■□□□□ 0.32
RPAIN-216ENST00000575599 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-216ENST00000575599 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
RPAIN-216ENST00000575599 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
RPAIN-216ENST00000575599 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
RPAIN-216ENST00000575599 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
RPAIN-216ENST00000575599 SRGNP10124 158 aa17.04■□□□□ 0.32
RPAIN-216ENST00000575599 RIC3Q7Z5B4 369 aa17.04■□□□□ 0.32
RPAIN-216ENST00000575599 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
RPAIN-216ENST00000575599 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
RPAIN-216ENST00000575599 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
RPAIN-216ENST00000575599 NLRP10Q86W26 655 aa17.03■□□□□ 0.32
RPAIN-216ENST00000575599 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
RPAIN-216ENST00000575599 CNKSR1Q969H4 720 aa17.02■□□□□ 0.32
RPAIN-216ENST00000575599 ZBTB22O15209 634 aa17.02■□□□□ 0.31
RPAIN-216ENST00000575599 VAMP4O75379 141 aa17.02■□□□□ 0.31
RPAIN-216ENST00000575599 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.31
RPAIN-216ENST00000575599 NPR1P16066 1061 aa17.02■□□□□ 0.31
RPAIN-216ENST00000575599 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.31
RPAIN-216ENST00000575599 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
RPAIN-216ENST00000575599 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-216ENST00000575599 C21orf2O43822 256 aa17.01■□□□□ 0.31
RPAIN-216ENST00000575599 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
RPAIN-216ENST00000575599 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-216ENST00000575599 MYD88Q99836 296 aa17.01■□□□□ 0.31
RPAIN-216ENST00000575599 SLX4Q8IY92 1834 aa17.01■□□□□ 0.31
RPAIN-216ENST00000575599 RASSF7Q02833 373 aa17■□□□□ 0.31
RPAIN-216ENST00000575599 EVX2Q03828 476 aa17■□□□□ 0.31
RPAIN-216ENST00000575599 G2E3Q7L622 706 aa17■□□□□ 0.31
RPAIN-216ENST00000575599 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
RPAIN-216ENST00000575599 ISCA1Q9BUE6 129 aa17■□□□□ 0.31
RPAIN-216ENST00000575599 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
RPAIN-216ENST00000575599 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
RPAIN-216ENST00000575599 E9PSI1 815 aa16.99■□□□□ 0.31
RPAIN-216ENST00000575599 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
RPAIN-216ENST00000575599 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
RPAIN-216ENST00000575599 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
RPAIN-216ENST00000575599 MAP3K2Q9Y2U5 619 aa16.99■□□□□ 0.31
RPAIN-216ENST00000575599 ADCY9O60503 1353 aa16.98■□□□□ 0.31
RPAIN-216ENST00000575599 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-216ENST00000575599 NLRP3Q96P20 1036 aa16.98■□□□□ 0.31
RPAIN-216ENST00000575599 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
RPAIN-216ENST00000575599 FLIIQ13045 1269 aa16.97■□□□□ 0.31
RPAIN-216ENST00000575599 RTL5Q5HYW3 569 aaPredicted RBP16.97■□□□□ 0.31
RPAIN-216ENST00000575599 C9orf131Q5VYM1 1079 aa16.97■□□□□ 0.31
RPAIN-216ENST00000575599 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
RPAIN-216ENST00000575599 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
RPAIN-216ENST00000575599 FAM89AQ96GI7 184 aa16.97■□□□□ 0.31
RPAIN-216ENST00000575599 CDCA7LQ96GN5 454 aa16.97■□□□□ 0.31
RPAIN-216ENST00000575599 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
RPAIN-216ENST00000575599 LAMB2P55268 1798 aa16.96■□□□□ 0.31
RPAIN-216ENST00000575599 ALDH1B1P30837 517 aa16.96■□□□□ 0.31
RPAIN-216ENST00000575599 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
RPAIN-216ENST00000575599 FKBP5Q13451 457 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-216ENST00000575599 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
RPAIN-216ENST00000575599 ZNF526Q8TF50 670 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-216ENST00000575599 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
RPAIN-216ENST00000575599 RNF181Q9P0P0 153 aa16.96■□□□□ 0.31
RPAIN-216ENST00000575599 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
RPAIN-216ENST00000575599 NFKBIEO00221 500 aa16.95■□□□□ 0.3
RPAIN-216ENST00000575599 TRIM28Q13263 835 aaKnown RBP16.95■□□□□ 0.3
RPAIN-216ENST00000575599 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
RPAIN-216ENST00000575599 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
RPAIN-216ENST00000575599 SBF1O95248 1867 aa16.95■□□□□ 0.3
RPAIN-216ENST00000575599 FER1L6Q2WGJ9 1857 aa16.94■□□□□ 0.3
RPAIN-216ENST00000575599 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
RPAIN-216ENST00000575599 SOGA3Q5TF21 947 aa16.94■□□□□ 0.3
RPAIN-216ENST00000575599 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
RPAIN-216ENST00000575599 CWC25Q9NXE8 425 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-216ENST00000575599 HOXA10P31260 410 aaPredicted RBP16.93■□□□□ 0.3
RPAIN-216ENST00000575599 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
RPAIN-216ENST00000575599 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
RPAIN-216ENST00000575599 TAOK3Q9H2K8 898 aa16.93■□□□□ 0.3
RPAIN-216ENST00000575599 LMNB1P20700 586 aa16.92■□□□□ 0.3
RPAIN-216ENST00000575599 ZBTB38Q8NAP3 1195 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-216ENST00000575599 C7orf43Q8WVR3 580 aa16.92■□□□□ 0.3
RPAIN-216ENST00000575599 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-216ENST00000575599 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
RPAIN-216ENST00000575599 IRS4O14654 1257 aaPredicted RBP16.91■□□□□ 0.3
RPAIN-216ENST00000575599 PPEF1O14829 653 aaPredicted RBP16.91■□□□□ 0.3
RPAIN-216ENST00000575599 IGKV5-2P06315 115 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms