RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 XAGE3Q8WTP9 111 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 FAM227BQ96M60 508 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 METTL22Q9BUU2 404 aaPredicted RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 C19orf44Q9H6X5 657 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.74□□□□□ -0.697e-7■■■■□ 25.4
NCBP3-204ENST00000574911 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 CNPY2Q9Y2B0 182 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 RBM8AQ9Y5S9 174 aaKnown RBP10.74□□□□□ -0.69
NCBP3-204ENST00000574911 CYP46A1Q9Y6A2 500 aa10.74□□□□□ -0.69
NCBP3-204ENST00000574911 PHF14O94880 888 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 NEXNQ0ZGT2 675 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 LRP10Q7Z4F1 713 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
NCBP3-204ENST00000574911 COL18A1P39060 1754 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 MEGF6O75095 1541 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 PLEKHG2Q9H7P9 1386 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 MYL6BP14649 208 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 MSNP26038 577 aaKnown RBP10.73□□□□□ -0.69
NCBP3-204ENST00000574911 ST3GAL1Q11201 340 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 EPHA10Q5JZY3 1008 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 COPS6Q7L5N1 327 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 CCDC83Q8IWF9 413 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
NCBP3-204ENST00000574911 ZKSCAN1P17029 563 aaPredicted RBP10.72□□□□□ -0.69
NCBP3-204ENST00000574911 GJB2P29033 226 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 MYD88Q99836 296 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 NLRP2Q9NX02 1062 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 JCADQ9P266 1359 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 MED23Q9ULK4 1368 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 SLC27A2O14975 620 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 IFNL2Q8IZJ0 200 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 MTMR6Q9Y217 621 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 ATP6V1DQ9Y5K8 247 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 COL15A1P39059 1388 aa10.72□□□□□ -0.69
NCBP3-204ENST00000574911 A0A0D9SFI3 127 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 RFX5P48382 616 aaPredicted RBP10.71□□□□□ -0.69
NCBP3-204ENST00000574911 UBE2HP62256 183 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 ME3Q16798 604 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 CCDC183Q5T5S1 534 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 RNF214Q8ND24 703 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 KLHDC4Q8TBB5 520 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 ZNF496Q96IT1 587 aaPredicted RBP10.71□□□□□ -0.69
NCBP3-204ENST00000574911 SIL1Q9H173 461 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 ALDH8A1Q9H2A2 487 aaPredicted RBP10.71□□□□□ -0.69
NCBP3-204ENST00000574911 COPRSQ9NQ92 184 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 ZNF500O60304 480 aaPredicted RBP10.71□□□□□ -0.69
NCBP3-204ENST00000574911 OFD1O75665 1012 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 PSMA5P28066 241 aa10.71□□□□□ -0.69
NCBP3-204ENST00000574911 LETM1O95202 739 aaPredicted RBP10.71□□□□□ -0.7
NCBP3-204ENST00000574911 SNRPA1P09661 255 aaKnown RBP10.71□□□□□ -0.7
NCBP3-204ENST00000574911 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.7
NCBP3-204ENST00000574911 FSD1Q9BTV5 496 aa10.71□□□□□ -0.7
NCBP3-204ENST00000574911 TPCN1Q9ULQ1 816 aa10.71□□□□□ -0.7
NCBP3-204ENST00000574911 USP16Q9Y5T5 823 aa10.71□□□□□ -0.7
NCBP3-204ENST00000574911 KCNJ4P48050 445 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 UVSSAQ2YD98 709 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 KLHL34Q8N239 644 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 DCAF5Q96JK2 942 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 ZKSCAN5Q9Y2L8 839 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 PKD1L3Q7Z443 1732 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 MCM5P33992 734 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 TSGA10IPQ3SY00 556 aa10.7□□□□□ -0.7
NCBP3-204ENST00000574911 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
NCBP3-204ENST00000574911 DDX54Q8TDD1 881 aaKnown RBP10.7□□□□□ -0.7
NCBP3-204ENST00000574911 ATP5JP18859 108 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 PTPN12Q05209 780 aaKnown RBP10.69□□□□□ -0.7
NCBP3-204ENST00000574911 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 NECAB1Q8N987 351 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 FAM184AQ8NB25 1140 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 GLI3P10071 1580 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 CYP27B1O15528 508 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 TPM2P07951 284 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 RPS6KB1P23443 525 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
NCBP3-204ENST00000574911 TNNI3KQ59H18 835 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 RNF20Q5VTR2 975 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 TTC5Q8N0Z6 440 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 FMNL2Q96PY5 1086 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 FPGT-TNNI3KV9GXZ4 949 aa10.69□□□□□ -0.7
NCBP3-204ENST00000574911 FIBPO43427 364 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 PDIA4P13667 645 aaKnown RBP10.68□□□□□ -0.7
NCBP3-204ENST00000574911 DNM1Q05193 864 aaKnown RBP10.68□□□□□ -0.7
NCBP3-204ENST00000574911 ANKRD1Q15327 319 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.68□□□□□ -0.7
NCBP3-204ENST00000574911 ZNF589Q86UQ0 364 aaPredicted RBP10.68□□□□□ -0.7
NCBP3-204ENST00000574911 HMG20BQ9P0W2 317 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 DBNLQ9UJU6 430 aaKnown RBP10.68□□□□□ -0.7
NCBP3-204ENST00000574911 RFX7Q2KHR2 1363 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 ARFGEF2Q9Y6D5 1785 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 TAF5LO75529 589 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 CASP7P55210 303 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 TFCP2Q12800 502 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 USPL1Q5W0Q7 1092 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 BLOC1S2Q6QNY1 142 aa10.68□□□□□ -0.7
NCBP3-204ENST00000574911 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms