RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 MCM2P49736 904 aa17.02■□□□□ 0.32
VPS33B-208ENST00000574755 CCDC191Q8NCU4 936 aa17.02■□□□□ 0.32
VPS33B-208ENST00000574755 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.31
VPS33B-208ENST00000574755 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.31
VPS33B-208ENST00000574755 ATG3Q9NT62 314 aa17.02■□□□□ 0.31
VPS33B-208ENST00000574755 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
VPS33B-208ENST00000574755 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
VPS33B-208ENST00000574755 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
VPS33B-208ENST00000574755 EXOC5O00471 708 aa17.01■□□□□ 0.31
VPS33B-208ENST00000574755 FOXO4P98177 505 aa17.01■□□□□ 0.31
VPS33B-208ENST00000574755 TFCP2Q12800 502 aa17.01■□□□□ 0.31
VPS33B-208ENST00000574755 UPF3BQ9BZI7 483 aaKnown RBP17.01■□□□□ 0.31
VPS33B-208ENST00000574755 BOLA2Q9H3K6 86 aa17.01■□□□□ 0.31
VPS33B-208ENST00000574755 CWC22Q9HCG8 908 aaKnown RBP17.01■□□□□ 0.31
VPS33B-208ENST00000574755 SSFA2P28290 1259 aa17■□□□□ 0.31
VPS33B-208ENST00000574755 WNK3Q9BYP7 1800 aa17■□□□□ 0.31
VPS33B-208ENST00000574755 STARD3NLO95772 234 aa17■□□□□ 0.31
VPS33B-208ENST00000574755 TNNI3KQ59H18 835 aa17■□□□□ 0.31
VPS33B-208ENST00000574755 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
VPS33B-208ENST00000574755 TMX3Q96JJ7 454 aa17■□□□□ 0.31
VPS33B-208ENST00000574755 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
VPS33B-208ENST00000574755 TRAK2O60296 914 aa16.99■□□□□ 0.31
VPS33B-208ENST00000574755 NUCB2P80303 420 aa16.99■□□□□ 0.31
VPS33B-208ENST00000574755 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
VPS33B-208ENST00000574755 BCL9O00512 1426 aa16.99■□□□□ 0.31
VPS33B-208ENST00000574755 HIP1O00291 1037 aa16.99■□□□□ 0.31
VPS33B-208ENST00000574755 ADAMTS2O95450 1211 aa16.98■□□□□ 0.31
VPS33B-208ENST00000574755 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
VPS33B-208ENST00000574755 NOL8Q76FK4 1167 aaKnown RBP16.98■□□□□ 0.31
VPS33B-208ENST00000574755 ARXQ96QS3 562 aa16.98■□□□□ 0.31
VPS33B-208ENST00000574755 FSD1Q9BTV5 496 aa16.98■□□□□ 0.31
VPS33B-208ENST00000574755 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
VPS33B-208ENST00000574755 LRP6O75581 1613 aa16.98■□□□□ 0.31
VPS33B-208ENST00000574755 LTBP4Q8N2S1 1624 aa16.98■□□□□ 0.31
VPS33B-208ENST00000574755 PHLPP1O60346 1717 aa16.98■□□□□ 0.31
VPS33B-208ENST00000574755 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
VPS33B-208ENST00000574755 TCIRG1Q13488 830 aa16.97■□□□□ 0.31
VPS33B-208ENST00000574755 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
VPS33B-208ENST00000574755 IL27Q8NEV9 243 aa16.96■□□□□ 0.31
VPS33B-208ENST00000574755 FAM227BQ96M60 508 aa16.96■□□□□ 0.31
VPS33B-208ENST00000574755 ATP5JP18859 108 aa16.95■□□□□ 0.3
VPS33B-208ENST00000574755 PTH1RQ03431 593 aa16.95■□□□□ 0.3
VPS33B-208ENST00000574755 NMIQ13287 307 aaPredicted RBP16.95■□□□□ 0.3
VPS33B-208ENST00000574755 RASEFQ8IZ41 740 aa16.95■□□□□ 0.3
VPS33B-208ENST00000574755 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.95■□□□□ 0.3
VPS33B-208ENST00000574755 PKP1Q13835 747 aa16.95■□□□□ 0.3
VPS33B-208ENST00000574755 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
VPS33B-208ENST00000574755 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
VPS33B-208ENST00000574755 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
VPS33B-208ENST00000574755 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
VPS33B-208ENST00000574755 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
VPS33B-208ENST00000574755 CYP2E1P05181 493 aaPredicted RBP16.94■□□□□ 0.3
VPS33B-208ENST00000574755 PTMSP20962 102 aa16.94■□□□□ 0.3
VPS33B-208ENST00000574755 CUL4AQ13619 759 aa16.94■□□□□ 0.3
VPS33B-208ENST00000574755 CLEC17AQ6ZS10 378 aa16.94■□□□□ 0.3
VPS33B-208ENST00000574755 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
VPS33B-208ENST00000574755 PRIM1P49642 420 aaKnown RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 EDC3Q96F86 508 aaKnown RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
VPS33B-208ENST00000574755 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
VPS33B-208ENST00000574755 MAP3K15Q6ZN16 1313 aa16.93■□□□□ 0.3
VPS33B-208ENST00000574755 A0A0D9SFI3 127 aa16.93■□□□□ 0.3
VPS33B-208ENST00000574755 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 CYP19A1P11511 503 aaPredicted RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 IL15P40933 162 aaPredicted RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 TRIM28Q13263 835 aaKnown RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 PRPF40BQ6NWY9 871 aaKnown RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 ZNF594Q96JF6 807 aaPredicted RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 CDCA7Q9BWT1 371 aaPredicted RBP16.93■□□□□ 0.3
VPS33B-208ENST00000574755 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
VPS33B-208ENST00000574755 KCNJ4P48050 445 aa16.92■□□□□ 0.3
VPS33B-208ENST00000574755 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
VPS33B-208ENST00000574755 NEUROD6Q96NK8 337 aa16.92■□□□□ 0.3
VPS33B-208ENST00000574755 DNAJC2Q99543 621 aaKnown RBP16.92■□□□□ 0.3
VPS33B-208ENST00000574755 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
VPS33B-208ENST00000574755 DDB1Q16531 1140 aa16.92■□□□□ 0.3
VPS33B-208ENST00000574755 GIGYF2Q6Y7W6 1299 aaKnown RBP16.92■□□□□ 0.3
VPS33B-208ENST00000574755 FAM89AQ96GI7 184 aa16.92■□□□□ 0.3
VPS33B-208ENST00000574755 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
VPS33B-208ENST00000574755 A0A0G2JS52 829 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 NUTM2BA6NNL0 878 aaPredicted RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 NUTM2EB1AL46 878 aaPredicted RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 EYA2O00167 538 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 CCDC57Q2TAC2 916 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 LRRC24Q50LG9 513 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 NUTM2AQ8IVF1 878 aaPredicted RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 NDUFB9Q9Y6M9 179 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 PCCAP05165 728 aaPredicted RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 ZKSCAN1P17029 563 aaPredicted RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
VPS33B-208ENST00000574755 SNRKQ9NRH2 765 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 ZBTB1Q9Y2K1 713 aa16.91■□□□□ 0.3
VPS33B-208ENST00000574755 SKOR2Q2VWA4 1001 aaPredicted RBP16.9■□□□□ 0.3
VPS33B-208ENST00000574755 MAP4K1Q92918 833 aa16.9■□□□□ 0.3
VPS33B-208ENST00000574755 TTC14Q96N46 770 aa16.9■□□□□ 0.3
VPS33B-208ENST00000574755 HAUS7Q99871 368 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms