RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
CTNS-208ENST00000574218 GRIPAP1Q4V328 841 aa15.93■□□□□ 0.14
CTNS-208ENST00000574218 LARGE2Q8N3Y3 721 aa15.93■□□□□ 0.14
CTNS-208ENST00000574218 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
CTNS-208ENST00000574218 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
CTNS-208ENST00000574218 LTBP1Q14766 1721 aa15.93■□□□□ 0.14
CTNS-208ENST00000574218 CYP4F22Q6NT55 531 aa15.92■□□□□ 0.14
CTNS-208ENST00000574218 USP50Q70EL3 339 aaPredicted RBP15.92■□□□□ 0.14
CTNS-208ENST00000574218 GPR101Q96P66 508 aaPredicted RBP15.92■□□□□ 0.14
CTNS-208ENST00000574218 CASP8AP2Q9UKL3 1982 aa15.91■□□□□ 0.14
CTNS-208ENST00000574218 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
CTNS-208ENST00000574218 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
CTNS-208ENST00000574218 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
CTNS-208ENST00000574218 PHACTR3Q96KR7 559 aa15.91■□□□□ 0.14
CTNS-208ENST00000574218 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
CTNS-208ENST00000574218 MCM10Q7L590 875 aa15.9■□□□□ 0.14
CTNS-208ENST00000574218 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
CTNS-208ENST00000574218 NBPF26B4DH59 902 aa15.89■□□□□ 0.13
CTNS-208ENST00000574218 EPS15P42566 896 aa15.89■□□□□ 0.13
CTNS-208ENST00000574218 HLFQ16534 295 aa15.89■□□□□ 0.13
CTNS-208ENST00000574218 NBPF10Q6P3W6 841 aaKnown RBP15.89■□□□□ 0.13
CTNS-208ENST00000574218 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
CTNS-208ENST00000574218 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
CTNS-208ENST00000574218 NBPF15Q8N660 670 aa15.89■□□□□ 0.13
CTNS-208ENST00000574218 RBM17Q96I25 401 aaKnown RBP15.89■□□□□ 0.13
CTNS-208ENST00000574218 ABCC12Q96J65 1359 aa15.88■□□□□ 0.13
CTNS-208ENST00000574218 DLG5Q8TDM6 1919 aa15.88■□□□□ 0.13
CTNS-208ENST00000574218 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
CTNS-208ENST00000574218 CA12O43570 354 aa15.88■□□□□ 0.13
CTNS-208ENST00000574218 U2AF1L5P0DN76 240 aaPredicted RBP15.88■□□□□ 0.13
CTNS-208ENST00000574218 MAP2K2P36507 400 aa15.88■□□□□ 0.13
CTNS-208ENST00000574218 SCNN1DP51172 638 aa15.88■□□□□ 0.13
CTNS-208ENST00000574218 U2AF1Q01081 240 aaKnown RBP eCLIP15.88■□□□□ 0.13
CTNS-208ENST00000574218 CRY2Q49AN0 593 aa15.88■□□□□ 0.13
CTNS-208ENST00000574218 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
CTNS-208ENST00000574218 TLL2Q9Y6L7 1015 aa15.88■□□□□ 0.13
CTNS-208ENST00000574218 SNED1Q8TER0 1413 aa15.87■□□□□ 0.13
CTNS-208ENST00000574218 COL4A5P29400 1685 aa15.87■□□□□ 0.13
CTNS-208ENST00000574218 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
CTNS-208ENST00000574218 PPIP5K2O43314 1243 aa15.87■□□□□ 0.13
CTNS-208ENST00000574218 NEFMP07197 916 aa15.87■□□□□ 0.13
CTNS-208ENST00000574218 ADARB2Q9NS39 739 aaKnown RBP15.87■□□□□ 0.13
CTNS-208ENST00000574218 KDM3BQ7LBC6 1761 aa15.87■□□□□ 0.13
CTNS-208ENST00000574218 RIC1Q4ADV7 1423 aa15.86■□□□□ 0.13
CTNS-208ENST00000574218 ERVV-1B6SEH8 477 aa15.86■□□□□ 0.13
CTNS-208ENST00000574218 TRAF5O00463 557 aa15.86■□□□□ 0.13
CTNS-208ENST00000574218 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
CTNS-208ENST00000574218 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
CTNS-208ENST00000574218 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
CTNS-208ENST00000574218 TSKSQ9UJT2 592 aa15.86■□□□□ 0.13
CTNS-208ENST00000574218 MAP3K15Q6ZN16 1313 aa15.86■□□□□ 0.13
CTNS-208ENST00000574218 IBTKQ9P2D0 1353 aaPredicted RBP15.86■□□□□ 0.13
CTNS-208ENST00000574218 AOC2O75106 756 aa15.85■□□□□ 0.13
CTNS-208ENST00000574218 CELF2O95319 508 aaKnown RBP15.85■□□□□ 0.13
CTNS-208ENST00000574218 GPTP24298 496 aa15.85■□□□□ 0.13
CTNS-208ENST00000574218 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
CTNS-208ENST00000574218 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
CTNS-208ENST00000574218 SUPT20HQ8NEM7 779 aa15.85■□□□□ 0.13
CTNS-208ENST00000574218 CRAMP1Q96RY5 1269 aa15.85■□□□□ 0.13
CTNS-208ENST00000574218 RRP7AQ9Y3A4 280 aaKnown RBP15.85■□□□□ 0.13
CTNS-208ENST00000574218 RGS19P49795 217 aa15.84■□□□□ 0.13
CTNS-208ENST00000574218 CST9Q5W186 159 aa15.84■□□□□ 0.13
CTNS-208ENST00000574218 PNISRQ8TF01 805 aaKnown RBP15.84■□□□□ 0.13
CTNS-208ENST00000574218 AOC3Q16853 763 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 PPP1R42Q7Z4L9 355 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 NLRP3Q96P20 1036 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 MCOLN1Q9GZU1 580 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 VPS33BQ9H267 617 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 ZNF408Q9H9D4 720 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 GPRC5DQ9NZD1 345 aa15.83■□□□□ 0.12
CTNS-208ENST00000574218 MYL6BP14649 208 aa15.82■□□□□ 0.12
CTNS-208ENST00000574218 BRPF1P55201 1214 aaPredicted RBP15.82■□□□□ 0.12
CTNS-208ENST00000574218 ZBTB3Q9H5J0 574 aa15.82■□□□□ 0.12
CTNS-208ENST00000574218 PCDH10Q9P2E7 1040 aa15.82■□□□□ 0.12
CTNS-208ENST00000574218 ANKRD36CQ5JPF3 1778 aa15.82■□□□□ 0.12
CTNS-208ENST00000574218 AKAP11Q9UKA4 1901 aa15.82■□□□□ 0.12
CTNS-208ENST00000574218 LAMB2P55268 1798 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 DGKZQ13574 1117 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 TTLL7Q6ZT98 887 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 SAPCD2Q86UD0 394 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 CDHR2Q9BYE9 1310 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 GLIS2Q9BZE0 524 aaPredicted RBP15.81■□□□□ 0.12
CTNS-208ENST00000574218 MIS18AQ9NYP9 233 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 ZNRF3Q9ULT6 936 aa15.81■□□□□ 0.12
CTNS-208ENST00000574218 PDE4DIPQ5VU43 2346 aa15.8■□□□□ 0.12
CTNS-208ENST00000574218 UBN2Q6ZU65 1347 aa15.8■□□□□ 0.12
CTNS-208ENST00000574218 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
CTNS-208ENST00000574218 TNIP1Q15025 636 aa15.8■□□□□ 0.12
CTNS-208ENST00000574218 PARP10Q53GL7 1025 aa15.8■□□□□ 0.12
CTNS-208ENST00000574218 CIAPIN1Q6FI81 312 aa15.8■□□□□ 0.12
CTNS-208ENST00000574218 DPP8Q6V1X1 898 aaPredicted RBP15.8■□□□□ 0.12
CTNS-208ENST00000574218 ATP6V0A2Q9Y487 856 aa15.8■□□□□ 0.12
CTNS-208ENST00000574218 POLR2AP24928 1970 aaKnown RBP15.79■□□□□ 0.12
CTNS-208ENST00000574218 CXCL9Q07325 125 aa15.79■□□□□ 0.12
CTNS-208ENST00000574218 NTSR2O95665 410 aa15.78■□□□□ 0.12
CTNS-208ENST00000574218 NOGQ13253 232 aa15.78■□□□□ 0.12
CTNS-208ENST00000574218 CDC37L1Q7L3B6 337 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms