RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
NDE1-210ENST00000574163 DDX58O95786 925 aaKnown RBP12.57□□□□□ -0.4
NDE1-210ENST00000574163 GPTP24298 496 aa12.57□□□□□ -0.4
NDE1-210ENST00000574163 CHRNA5P30532 468 aa12.57□□□□□ -0.4
NDE1-210ENST00000574163 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
NDE1-210ENST00000574163 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
NDE1-210ENST00000574163 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
NDE1-210ENST00000574163 DDX60Q8IY21 1712 aaKnown RBP12.57□□□□□ -0.4
NDE1-210ENST00000574163 SRGNP10124 158 aa12.56□□□□□ -0.4
NDE1-210ENST00000574163 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
NDE1-210ENST00000574163 TRIM28Q13263 835 aaKnown RBP12.56□□□□□ -0.4
NDE1-210ENST00000574163 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
NDE1-210ENST00000574163 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
NDE1-210ENST00000574163 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 VAMP4O75379 141 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
NDE1-210ENST00000574163 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 SUSD4Q5VX71 490 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
NDE1-210ENST00000574163 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
NDE1-210ENST00000574163 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 ADCY9O60503 1353 aa12.55□□□□□ -0.4
NDE1-210ENST00000574163 NPR1P16066 1061 aa12.54□□□□□ -0.4
NDE1-210ENST00000574163 YY1P25490 414 aa12.54□□□□□ -0.4
NDE1-210ENST00000574163 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
NDE1-210ENST00000574163 CNKSR1Q969H4 720 aa12.54□□□□□ -0.4
NDE1-210ENST00000574163 SBF1O95248 1867 aa12.54□□□□□ -0.4
NDE1-210ENST00000574163 FAM177BA6PVY3 158 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
NDE1-210ENST00000574163 CCDC24Q8N4L8 307 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 WWC3Q9ULE0 1092 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 SH3TC1Q8TE82 1336 aa12.53□□□□□ -0.4
NDE1-210ENST00000574163 MYH3P11055 1940 aa12.52□□□□□ -0.4
NDE1-210ENST00000574163 CT47B1P0C2W7 299 aaPredicted RBP12.52□□□□□ -0.41
NDE1-210ENST00000574163 FLIIQ13045 1269 aa12.52□□□□□ -0.41
NDE1-210ENST00000574163 SLC10A5Q5PT55 438 aa12.52□□□□□ -0.41
NDE1-210ENST00000574163 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
NDE1-210ENST00000574163 KSR2Q6VAB6 950 aa12.52□□□□□ -0.41
NDE1-210ENST00000574163 CCDC191Q8NCU4 936 aa12.52□□□□□ -0.41
NDE1-210ENST00000574163 ZNF622Q969S3 477 aaKnown RBP eCLIP12.52□□□□□ -0.411e-8■□□□□ 8.5
NDE1-210ENST00000574163 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.41
NDE1-210ENST00000574163 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
NDE1-210ENST00000574163 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
NDE1-210ENST00000574163 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
NDE1-210ENST00000574163 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
NDE1-210ENST00000574163 PRPF40BQ6NWY9 871 aaKnown RBP12.51□□□□□ -0.41
NDE1-210ENST00000574163 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
NDE1-210ENST00000574163 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
NDE1-210ENST00000574163 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
NDE1-210ENST00000574163 PI4KAP2A4QPH2 592 aa12.5□□□□□ -0.41
NDE1-210ENST00000574163 NEXNQ0ZGT2 675 aa12.5□□□□□ -0.41
NDE1-210ENST00000574163 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
NDE1-210ENST00000574163 PI4KAP1Q8N8J0 262 aa12.5□□□□□ -0.41
NDE1-210ENST00000574163 MAP3K2Q9Y2U5 619 aa12.5□□□□□ -0.41
NDE1-210ENST00000574163 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
NDE1-210ENST00000574163 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 TCERG1O14776 1098 aaKnown RBP12.49□□□□□ -0.41
NDE1-210ENST00000574163 ALDH1B1P30837 517 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 FKBP5Q13451 457 aaPredicted RBP12.49□□□□□ -0.41
NDE1-210ENST00000574163 POLA2Q14181 598 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 G2E3Q7L622 706 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
NDE1-210ENST00000574163 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
NDE1-210ENST00000574163 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 MYD88Q99836 296 aa12.49□□□□□ -0.41
NDE1-210ENST00000574163 CWC25Q9NXE8 425 aaPredicted RBP12.49□□□□□ -0.41
NDE1-210ENST00000574163 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
NDE1-210ENST00000574163 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
NDE1-210ENST00000574163 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
NDE1-210ENST00000574163 PCCAP05165 728 aaPredicted RBP12.48□□□□□ -0.41
NDE1-210ENST00000574163 ALDH1L2Q3SY69 923 aa12.48□□□□□ -0.41
NDE1-210ENST00000574163 C7orf43Q8WVR3 580 aa12.48□□□□□ -0.41
NDE1-210ENST00000574163 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
NDE1-210ENST00000574163 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
NDE1-210ENST00000574163 RBM17Q96I25 401 aaKnown RBP12.48□□□□□ -0.41
NDE1-210ENST00000574163 NFKBIEO00221 500 aa12.47□□□□□ -0.41
NDE1-210ENST00000574163 IGKV5-2P06315 115 aa12.47□□□□□ -0.41
NDE1-210ENST00000574163 HNRNPUQ00839 825 aaKnown RBP eCLIP12.47□□□□□ -0.41
NDE1-210ENST00000574163 CCDC93Q567U6 631 aa12.47□□□□□ -0.41
NDE1-210ENST00000574163 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
NDE1-210ENST00000574163 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
NDE1-210ENST00000574163 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
NDE1-210ENST00000574163 PTPRCP08575 1304 aa12.46□□□□□ -0.41
NDE1-210ENST00000574163 NEURL1BA8MQ27 555 aa12.46□□□□□ -0.41
NDE1-210ENST00000574163 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.41
NDE1-210ENST00000574163 C21orf2O43822 256 aa12.46□□□□□ -0.41
NDE1-210ENST00000574163 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
NDE1-210ENST00000574163 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
NDE1-210ENST00000574163 FAM89AQ96GI7 184 aa12.46□□□□□ -0.41
NDE1-210ENST00000574163 ABCC4O15439 1325 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms