RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 TRIM27P14373 513 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 GPTP24298 496 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 BRCA1P38398 1863 aaKnown RBP17.17■□□□□ 0.34
NDE1-209ENST00000574109 PTGER2P43116 358 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 DDR1Q08345 913 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 KIAA1551Q9HCM1 1747 aa17.17■□□□□ 0.34
NDE1-209ENST00000574109 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
NDE1-209ENST00000574109 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
NDE1-209ENST00000574109 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
NDE1-209ENST00000574109 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
NDE1-209ENST00000574109 SERPINB2P05120 415 aa17.16■□□□□ 0.34
NDE1-209ENST00000574109 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
NDE1-209ENST00000574109 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
NDE1-209ENST00000574109 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
NDE1-209ENST00000574109 F6X3S4 739 aa17.15■□□□□ 0.34
NDE1-209ENST00000574109 NTSR2O95665 410 aa17.15■□□□□ 0.34
NDE1-209ENST00000574109 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
NDE1-209ENST00000574109 BEND3Q5T5X7 828 aa17.15■□□□□ 0.34
NDE1-209ENST00000574109 SLC4A10Q6U841 1118 aa17.15■□□□□ 0.34
NDE1-209ENST00000574109 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
NDE1-209ENST00000574109 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
NDE1-209ENST00000574109 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
NDE1-209ENST00000574109 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
NDE1-209ENST00000574109 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
NDE1-209ENST00000574109 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
NDE1-209ENST00000574109 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
NDE1-209ENST00000574109 GCKRQ14397 625 aa17.13■□□□□ 0.33
NDE1-209ENST00000574109 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
NDE1-209ENST00000574109 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
NDE1-209ENST00000574109 DZIP1LQ8IYY4 767 aaKnown RBP17.13■□□□□ 0.33
NDE1-209ENST00000574109 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
NDE1-209ENST00000574109 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
NDE1-209ENST00000574109 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
NDE1-209ENST00000574109 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
NDE1-209ENST00000574109 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
NDE1-209ENST00000574109 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
NDE1-209ENST00000574109 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
NDE1-209ENST00000574109 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
NDE1-209ENST00000574109 GRM8O00222 908 aa17.11■□□□□ 0.33
NDE1-209ENST00000574109 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
NDE1-209ENST00000574109 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
NDE1-209ENST00000574109 CHMP4BQ9H444 224 aaKnown RBP17.11■□□□□ 0.33
NDE1-209ENST00000574109 ABCC12Q96J65 1359 aa17.11■□□□□ 0.33
NDE1-209ENST00000574109 ARFGEF1Q9Y6D6 1849 aa17.1■□□□□ 0.33
NDE1-209ENST00000574109 PDE6BP35913 854 aa17.1■□□□□ 0.33
NDE1-209ENST00000574109 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
NDE1-209ENST00000574109 UTYO14607 1347 aa17.1■□□□□ 0.33
NDE1-209ENST00000574109 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
NDE1-209ENST00000574109 GNAI3P08754 354 aa17.08■□□□□ 0.32
NDE1-209ENST00000574109 TGFB2P61812 414 aa17.08■□□□□ 0.32
NDE1-209ENST00000574109 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
NDE1-209ENST00000574109 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.32
NDE1-209ENST00000574109 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
NDE1-209ENST00000574109 SRCAPQ6ZRS2 3230 aa17.07■□□□□ 0.32
NDE1-209ENST00000574109 H7C1W4 665 aa17.07■□□□□ 0.32
NDE1-209ENST00000574109 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
NDE1-209ENST00000574109 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
NDE1-209ENST00000574109 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
NDE1-209ENST00000574109 SPEF2Q9C093 1822 aa17.06■□□□□ 0.32
NDE1-209ENST00000574109 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
NDE1-209ENST00000574109 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
NDE1-209ENST00000574109 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
NDE1-209ENST00000574109 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
NDE1-209ENST00000574109 FAM89AQ96GI7 184 aa17.06■□□□□ 0.32
NDE1-209ENST00000574109 NLRP3Q96P20 1036 aa17.06■□□□□ 0.32
NDE1-209ENST00000574109 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
NDE1-209ENST00000574109 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
NDE1-209ENST00000574109 PDE8AO60658 829 aa17.05■□□□□ 0.32
NDE1-209ENST00000574109 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
NDE1-209ENST00000574109 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
NDE1-209ENST00000574109 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
NDE1-209ENST00000574109 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
NDE1-209ENST00000574109 CASP7P55210 303 aa17.04■□□□□ 0.32
NDE1-209ENST00000574109 H0YIN7 160 aa17.03■□□□□ 0.32
NDE1-209ENST00000574109 RLBP1P12271 317 aa17.03■□□□□ 0.32
NDE1-209ENST00000574109 CTSWP56202 376 aa17.03■□□□□ 0.32
NDE1-209ENST00000574109 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
NDE1-209ENST00000574109 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
NDE1-209ENST00000574109 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
NDE1-209ENST00000574109 FHDC1Q9C0D6 1143 aaPredicted RBP17.03■□□□□ 0.32
NDE1-209ENST00000574109 USP44Q9H0E7 712 aa17.03■□□□□ 0.32
NDE1-209ENST00000574109 PLIN1O60240 522 aa17.02■□□□□ 0.32
NDE1-209ENST00000574109 NPR1P16066 1061 aa17.02■□□□□ 0.32
NDE1-209ENST00000574109 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.32
NDE1-209ENST00000574109 STYK1Q6J9G0 422 aa17.02■□□□□ 0.32
NDE1-209ENST00000574109 PANK1Q8TE04 598 aa17.02■□□□□ 0.32
NDE1-209ENST00000574109 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
NDE1-209ENST00000574109 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
NDE1-209ENST00000574109 SRGNP10124 158 aa17.01■□□□□ 0.31
NDE1-209ENST00000574109 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
NDE1-209ENST00000574109 AAMPQ13685 434 aa17.01■□□□□ 0.31
NDE1-209ENST00000574109 C2CD5Q86YS7 1000 aa17.01■□□□□ 0.31
NDE1-209ENST00000574109 A0A1B0GUL6 1792 aa17.01■□□□□ 0.31
NDE1-209ENST00000574109 NBPF7P0C2Y1 421 aaPredicted RBP17■□□□□ 0.31
NDE1-209ENST00000574109 HOXA10P31260 410 aaPredicted RBP17■□□□□ 0.31
NDE1-209ENST00000574109 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
NDE1-209ENST00000574109 CNKSR1Q969H4 720 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms