RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 SF3A1Q15459 793 aaKnown RBP9.07□□□□□ -0.96
RPA1-207ENST00000574049 WASHC4Q2M389 1173 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 PTF1AQ7RTS3 328 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 CLASRPQ8N2M8 674 aaKnown RBP9.07□□□□□ -0.96
RPA1-207ENST00000574049 ATP2B1P20020 1258 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 FAM184AQ8NB25 1140 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 FSD1Q9BTV5 496 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 ZBTB1Q9Y2K1 713 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 NFAT5O94916 1531 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 TOPAZ1Q8N9V7 1692 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 PNMA6EA0A0J9YXQ4 647 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 SPC24Q8NBT2 197 aa9.07□□□□□ -0.96
RPA1-207ENST00000574049 DDX11L8A8MPP1 907 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 TRIM37O94972 964 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 MRE11P49959 708 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 FAM89AQ96GI7 184 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 CHAMP1Q96JM3 812 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 USP44Q9H0E7 712 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 TRPC5Q9UL62 973 aaPredicted RBP9.06□□□□□ -0.96
RPA1-207ENST00000574049 COL5A2P05997 1499 aaPredicted RBP9.06□□□□□ -0.96
RPA1-207ENST00000574049 ZKSCAN1P17029 563 aaPredicted RBP9.06□□□□□ -0.96
RPA1-207ENST00000574049 OTUD7AQ8TE49 926 aaPredicted RBP9.06□□□□□ -0.96
RPA1-207ENST00000574049 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
RPA1-207ENST00000574049 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 SSFA2P28290 1259 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 CEP85Q6P2H3 762 aa9.06□□□□□ -0.96
RPA1-207ENST00000574049 RPAP2Q8IXW5 612 aaPredicted RBP9.06□□□□□ -0.96
RPA1-207ENST00000574049 LOC102724428A0A0B4J2F2 783 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 SIK1P57059 783 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 DZIP3Q86Y13 1208 aaKnown RBP9.05□□□□□ -0.96
RPA1-207ENST00000574049 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
RPA1-207ENST00000574049 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
RPA1-207ENST00000574049 GRM8O00222 908 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 FERMT3Q86UX7 667 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 ABCC4O15439 1325 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 CEMIPQ8WUJ3 1361 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 ANKRD26Q9UPS8 1709 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 NBPF26B4DH59 902 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 NBPF14Q5TI25 921 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
RPA1-207ENST00000574049 NBPF15Q8N660 670 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 LINS1Q8NG48 757 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 SMC3Q9UQE7 1217 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 SPATA31A5Q5VU36 1347 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 SPATA31A7Q8IWB4 1347 aa9.05□□□□□ -0.96
RPA1-207ENST00000574049 CCDC8Q9H0W5 538 aaPredicted RBP9.04□□□□□ -0.96
RPA1-207ENST00000574049 CHAF1AQ13111 956 aaPredicted RBP9.04□□□□□ -0.96
RPA1-207ENST00000574049 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
RPA1-207ENST00000574049 SIRT2Q8IXJ6 389 aa9.04□□□□□ -0.96
RPA1-207ENST00000574049 FAM177A1Q8N128 213 aaPredicted RBP9.04□□□□□ -0.96
RPA1-207ENST00000574049 RBM27Q9P2N5 1060 aaKnown RBP9.04□□□□□ -0.96
RPA1-207ENST00000574049 CCNL1Q9UK58 526 aaPredicted RBP9.04□□□□□ -0.96
RPA1-207ENST00000574049 KDM6AO15550 1401 aaPredicted RBP9.04□□□□□ -0.96
RPA1-207ENST00000574049 NRKQ7Z2Y5 1582 aa9.04□□□□□ -0.96
RPA1-207ENST00000574049 GNPATO15228 680 aa9.04□□□□□ -0.96
RPA1-207ENST00000574049 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
RPA1-207ENST00000574049 HOXB7P09629 217 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 SYNE4Q8N205 404 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 ANKRD44Q8N8A2 993 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 BICD2Q8TD16 824 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 GCC1Q96CN9 775 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 LRRCC1Q9C099 1032 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 BICC1Q9H694 974 aaKnown RBP9.03□□□□□ -0.96
RPA1-207ENST00000574049 HDAC5Q9UQL6 1122 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 KIF1AQ12756 1690 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 ZNF771Q7L3S4 317 aaPredicted RBP9.03□□□□□ -0.96
RPA1-207ENST00000574049 SUCLG2Q96I99 432 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 TCEANC2Q96MN5 208 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 TEX13AQ9BXU3 409 aaPredicted RBP9.03□□□□□ -0.96
RPA1-207ENST00000574049 GRPEL1Q9HAV7 217 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 CWC25Q9NXE8 425 aaPredicted RBP9.03□□□□□ -0.96
RPA1-207ENST00000574049 AAMPQ13685 434 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 VPS72Q15906 364 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 AACSQ86V21 672 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
RPA1-207ENST00000574049 BOLA2Q9H3K6 86 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 HEG1Q9ULI3 1381 aa9.03□□□□□ -0.96
RPA1-207ENST00000574049 LTN1O94822 1766 aa9.02□□□□□ -0.96
RPA1-207ENST00000574049 FKBP4Q02790 459 aaKnown RBP eCLIP9.02□□□□□ -0.96
RPA1-207ENST00000574049 CCAR2Q8N163 923 aaKnown RBP9.02□□□□□ -0.96
RPA1-207ENST00000574049 WWC3Q9ULE0 1092 aa9.02□□□□□ -0.96
RPA1-207ENST00000574049 NIP7Q9Y221 180 aaKnown RBP eCLIP9.02□□□□□ -0.96
RPA1-207ENST00000574049 ROBO1Q9Y6N7 1651 aa9.02□□□□□ -0.97
RPA1-207ENST00000574049 HCLS1P14317 486 aaPredicted RBP9.02□□□□□ -0.97
RPA1-207ENST00000574049 RASSF8Q8NHQ8 419 aa9.02□□□□□ -0.97
RPA1-207ENST00000574049 ZNF594Q96JF6 807 aaPredicted RBP9.02□□□□□ -0.97
RPA1-207ENST00000574049 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.97
RPA1-207ENST00000574049 SYCE3A1L190 88 aa9.02□□□□□ -0.97
RPA1-207ENST00000574049 ZPR1O75312 459 aa9.02□□□□□ -0.97
RPA1-207ENST00000574049 TNNT3P45378 269 aaPredicted RBP9.02□□□□□ -0.97
RPA1-207ENST00000574049 CRKLP46109 303 aaKnown RBP9.02□□□□□ -0.97
RPA1-207ENST00000574049 HDAC1Q13547 482 aaPredicted RBP9.02□□□□□ -0.97
RPA1-207ENST00000574049 HLFQ16534 295 aa9.02□□□□□ -0.97
RPA1-207ENST00000574049 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.02□□□□□ -0.97
RPA1-207ENST00000574049 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
RPA1-207ENST00000574049 NEURL1BA8MQ27 555 aa9.01□□□□□ -0.97
RPA1-207ENST00000574049 PES1O00541 588 aaKnown RBP9.01□□□□□ -0.97
RPA1-207ENST00000574049 XRCC6P12956 609 aaKnown RBP eCLIP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms