RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PIGBQ92521 554 aa19.37■□□□□ 0.69
USP43-204ENST00000573955 K7ELQ4 463 aaPredicted RBP19.37■□□□□ 0.69
USP43-204ENST00000573955 CCDC8Q9H0W5 538 aaPredicted RBP19.37■□□□□ 0.69
USP43-204ENST00000573955 AOX1Q06278 1338 aa19.36■□□□□ 0.69
USP43-204ENST00000573955 TOGARAM1Q9Y4F4 1720 aa19.36■□□□□ 0.69
USP43-204ENST00000573955 EP400Q96L91 3159 aa19.36■□□□□ 0.69
USP43-204ENST00000573955 LAMB4A4D0S4 1761 aa19.36■□□□□ 0.69
USP43-204ENST00000573955 RABEP1Q15276 862 aa19.36■□□□□ 0.69
USP43-204ENST00000573955 ACSBG1Q96GR2 724 aa19.35■□□□□ 0.69
USP43-204ENST00000573955 CHMP3Q9Y3E7 222 aa19.35■□□□□ 0.69
USP43-204ENST00000573955 ARFGEF2Q9Y6D5 1785 aa19.35■□□□□ 0.69
USP43-204ENST00000573955 AFDNP55196 1824 aaKnown RBP19.35■□□□□ 0.69
USP43-204ENST00000573955 ERC1Q8IUD2 1116 aa19.35■□□□□ 0.69
USP43-204ENST00000573955 TLR7Q9NYK1 1049 aaKnown RBP19.35■□□□□ 0.69
USP43-204ENST00000573955 CHMP5Q9NZZ3 219 aa19.35■□□□□ 0.69
USP43-204ENST00000573955 ERBB4Q15303 1308 aa19.34■□□□□ 0.69
USP43-204ENST00000573955 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
USP43-204ENST00000573955 DHX37Q8IY37 1157 aaKnown RBP19.34■□□□□ 0.69
USP43-204ENST00000573955 EAF2Q96CJ1 260 aaPredicted RBP19.34■□□□□ 0.69
USP43-204ENST00000573955 UBR2Q8IWV8 1755 aa19.33■□□□□ 0.69
USP43-204ENST00000573955 CNTROBQ8N137 903 aa19.33■□□□□ 0.69
USP43-204ENST00000573955 NGLY1Q96IV0 654 aa19.33■□□□□ 0.69
USP43-204ENST00000573955 ECHDC1Q9NTX5 307 aa19.33■□□□□ 0.68
USP43-204ENST00000573955 PALD1Q9ULE6 856 aa19.33■□□□□ 0.68
USP43-204ENST00000573955 TRIM44Q96DX7 344 aaPredicted RBP19.32■□□□□ 0.68
USP43-204ENST00000573955 ATG3Q9NT62 314 aa19.32■□□□□ 0.68
USP43-204ENST00000573955 COL14A1Q05707 1796 aaKnown RBP19.32■□□□□ 0.68
USP43-204ENST00000573955 GLRX3O76003 335 aaKnown RBP19.32■□□□□ 0.68
USP43-204ENST00000573955 DMTNQ08495 405 aa19.32■□□□□ 0.68
USP43-204ENST00000573955 FAM182BQ5T319 152 aa19.32■□□□□ 0.68
USP43-204ENST00000573955 FAM13BQ9NYF5 915 aa19.32■□□□□ 0.68
USP43-204ENST00000573955 TNS2Q63HR2 1409 aa19.31■□□□□ 0.68
USP43-204ENST00000573955 EXOC5O00471 708 aa19.31■□□□□ 0.68
USP43-204ENST00000573955 CWC27Q6UX04 472 aaKnown RBP19.31■□□□□ 0.68
USP43-204ENST00000573955 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
USP43-204ENST00000573955 FAM98CQ17RN3 349 aaKnown RBP19.31■□□□□ 0.68
USP43-204ENST00000573955 LMBR1LQ6UX01 489 aa19.31■□□□□ 0.68
USP43-204ENST00000573955 PAPPAQ13219 1627 aa19.3■□□□□ 0.68
USP43-204ENST00000573955 GPATCH3Q96I76 525 aa19.3■□□□□ 0.68
USP43-204ENST00000573955 AK9Q5TCS8 1911 aa19.3■□□□□ 0.68
USP43-204ENST00000573955 MRE11P49959 708 aa19.3■□□□□ 0.68
USP43-204ENST00000573955 PRDM10Q9NQV6 1147 aa19.3■□□□□ 0.68
USP43-204ENST00000573955 TMEM51Q9NW97 253 aa19.3■□□□□ 0.68
USP43-204ENST00000573955 CWC25Q9NXE8 425 aaPredicted RBP19.3■□□□□ 0.68
USP43-204ENST00000573955 PLCH1Q4KWH8 1693 aa19.3■□□□□ 0.68
USP43-204ENST00000573955 PRIM1P49642 420 aaKnown RBP19.29■□□□□ 0.68
USP43-204ENST00000573955 COL22A1Q8NFW1 1626 aaPredicted RBP19.29■□□□□ 0.68
USP43-204ENST00000573955 CASP7P55210 303 aa19.29■□□□□ 0.68
USP43-204ENST00000573955 PTPN12Q05209 780 aaKnown RBP19.29■□□□□ 0.68
USP43-204ENST00000573955 PPP4R3BQ5MIZ7 849 aa19.29■□□□□ 0.68
USP43-204ENST00000573955 CERKQ8TCT0 537 aa19.29■□□□□ 0.68
USP43-204ENST00000573955 SPATA31A1Q5TZJ5 1347 aa19.28■□□□□ 0.68
USP43-204ENST00000573955 USP42Q9H9J4 1324 aaKnown RBP19.28■□□□□ 0.68
USP43-204ENST00000573955 HSPA1LP34931 641 aa19.28■□□□□ 0.68
USP43-204ENST00000573955 RFX5P48382 616 aaPredicted RBP19.28■□□□□ 0.68
USP43-204ENST00000573955 NOL8Q76FK4 1167 aaKnown RBP19.28■□□□□ 0.68
USP43-204ENST00000573955 DISP2A7MBM2 1401 aa19.28■□□□□ 0.68
USP43-204ENST00000573955 ST18O60284 1047 aa19.28■□□□□ 0.68
USP43-204ENST00000573955 DDIT3P35638 169 aa19.28■□□□□ 0.68
USP43-204ENST00000573955 NEK4P51957 841 aa19.28■□□□□ 0.68
USP43-204ENST00000573955 MTERF4Q7Z6M4 381 aaKnown RBP19.28■□□□□ 0.68
USP43-204ENST00000573955 BOLA2Q9H3K6 86 aa19.28■□□□□ 0.68
USP43-204ENST00000573955 MCCP23508 829 aa19.27■□□□□ 0.68
USP43-204ENST00000573955 TFCP2Q12800 502 aa19.27■□□□□ 0.68
USP43-204ENST00000573955 TERF1P54274 439 aa19.27■□□□□ 0.68
USP43-204ENST00000573955 DIAPH3Q9NSV4 1193 aa19.27■□□□□ 0.68
USP43-204ENST00000573955 RABL6Q3YEC7 729 aaPredicted RBP19.26■□□□□ 0.67
USP43-204ENST00000573955 PLCD3Q8N3E9 789 aa19.26■□□□□ 0.67
USP43-204ENST00000573955 H7C1W4 665 aa19.26■□□□□ 0.67
USP43-204ENST00000573955 FOXO4P98177 505 aa19.26■□□□□ 0.67
USP43-204ENST00000573955 DDB1Q16531 1140 aa19.26■□□□□ 0.67
USP43-204ENST00000573955 ANP32BQ92688 251 aaKnown RBP19.26■□□□□ 0.67
USP43-204ENST00000573955 COPRSQ9NQ92 184 aa19.26■□□□□ 0.67
USP43-204ENST00000573955 SGSM2O43147 1006 aa19.25■□□□□ 0.67
USP43-204ENST00000573955 BRD2P25440 801 aaKnown RBP19.25■□□□□ 0.67
USP43-204ENST00000573955 CCDC85AQ96PX6 553 aaPredicted RBP19.25■□□□□ 0.67
USP43-204ENST00000573955 SLC4A9Q96Q91 983 aa19.25■□□□□ 0.67
USP43-204ENST00000573955 UPF3BQ9BZI7 483 aaKnown RBP19.25■□□□□ 0.67
USP43-204ENST00000573955 MARCH10Q8NA82 808 aaPredicted RBP19.25■□□□□ 0.67
USP43-204ENST00000573955 ZNF830Q96NB3 372 aaPredicted RBP19.25■□□□□ 0.67
USP43-204ENST00000573955 NDUFB9Q9Y6M9 179 aa19.25■□□□□ 0.67
USP43-204ENST00000573955 ITGB4P16144 1822 aa19.25■□□□□ 0.67
USP43-204ENST00000573955 STARD3NLO95772 234 aa19.24■□□□□ 0.67
USP43-204ENST00000573955 KCNQ4P56696 695 aa19.24■□□□□ 0.67
USP43-204ENST00000573955 KCNQ2O43526 872 aa19.24■□□□□ 0.67
USP43-204ENST00000573955 PTF1AQ7RTS3 328 aa19.24■□□□□ 0.67
USP43-204ENST00000573955 EDC3Q96F86 508 aaKnown RBP19.24■□□□□ 0.67
USP43-204ENST00000573955 ZNF594Q96JF6 807 aaPredicted RBP19.24■□□□□ 0.67
USP43-204ENST00000573955 NUP188Q5SRE5 1749 aa19.24■□□□□ 0.67
USP43-204ENST00000573955 MCM4P33991 863 aa19.23■□□□□ 0.67
USP43-204ENST00000573955 KIF6Q6ZMV9 814 aa19.23■□□□□ 0.67
USP43-204ENST00000573955 BCL9O00512 1426 aa19.23■□□□□ 0.67
USP43-204ENST00000573955 CCDC191Q8NCU4 936 aa19.23■□□□□ 0.67
USP43-204ENST00000573955 TNPO1Q92973 898 aaKnown RBP19.23■□□□□ 0.67
USP43-204ENST00000573955 SPATA31A5Q5VU36 1347 aa19.23■□□□□ 0.67
USP43-204ENST00000573955 SPATA31A7Q8IWB4 1347 aa19.23■□□□□ 0.67
USP43-204ENST00000573955 GPTP24298 496 aa19.22■□□□□ 0.67
USP43-204ENST00000573955 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
USP43-204ENST00000573955 DBNLQ9UJU6 430 aaKnown RBP19.22■□□□□ 0.67
USP43-204ENST00000573955 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms