RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 MYZAPP0CAP1 466 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 PPP1R2P41236 205 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 IDI1Q13907 227 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 ZFYVE27Q5T4F4 411 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 MAP4K4O95819 1239 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 PDE4CQ08493 712 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 CEP112Q8N8E3 955 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 BOLA2Q9H3K6 86 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 SMARCA5O60264 1052 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 IKQ13123 557 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 MRPS27Q92552 414 aaKnown RBP14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 PPIP5K1Q6PFW1 1433 aa14.28□□□□□ -0.12
PCDHGA9-201ENST00000573521 ZNF445P59923 1031 aa14.27□□□□□ -0.12
PCDHGA9-201ENST00000573521 GBP2P32456 591 aaPredicted RBP14.27□□□□□ -0.12
PCDHGA9-201ENST00000573521 PPP1R42Q7Z4L9 355 aa14.27□□□□□ -0.12
PCDHGA9-201ENST00000573521 BRAPQ7Z569 592 aa14.27□□□□□ -0.12
PCDHGA9-201ENST00000573521 CATIPQ7Z7H3 387 aa14.27□□□□□ -0.12
PCDHGA9-201ENST00000573521 NME9Q86XW9 330 aa14.27□□□□□ -0.12
PCDHGA9-201ENST00000573521 PHF8Q9UPP1 1060 aa14.27□□□□□ -0.12
PCDHGA9-201ENST00000573521 A2MP01023 1474 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 CCDC172P0C7W6 258 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 CAMK4Q16566 473 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 FMNL3Q8IVF7 1028 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 ABCC10Q5T3U5 1492 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 CTR9Q6PD62 1173 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 SMARCC1Q92922 1105 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 KRT23Q9C075 422 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.13
PCDHGA9-201ENST00000573521 IDH1O75874 414 aaKnown RBP14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 MYL6BP14649 208 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 STXBP4Q6ZWJ1 553 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 RAI14Q9P0K7 980 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 ORC3Q9UBD5 711 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 LDHCP07864 332 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 GNAQP50148 359 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 PIP4K2BP78356 416 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 LUZP1Q86V48 1076 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 NBPF7P0C2Y1 421 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA9-201ENST00000573521 CYLC1P35663 651 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 TNIP1Q15025 636 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 CCDC91Q7Z6B0 441 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 EHMT1Q9H9B1 1298 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 CETN1Q12798 172 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 CACNA2D4Q7Z3S7 1137 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 FAM193AP78312 1265 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 GIGYF2Q6Y7W6 1299 aaKnown RBP14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 THUMPD2Q9BTF0 503 aaKnown RBP14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 PRM3Q9NNZ6 103 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 SBNO2Q9Y2G9 1366 aa14.25□□□□□ -0.13
PCDHGA9-201ENST00000573521 SMC1AQ14683 1233 aaKnown RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 TMC6Q7Z403 805 aa14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 PZPP20742 1482 aa14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 CCDC194A0A1B0GVG4 234 aa14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 C16orf45Q96MC5 204 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 CWC25Q9NXE8 425 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 NEFHP12036 1026 aa14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 FAM177A1Q8N128 213 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 LLPHQ9BRT6 129 aaKnown RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 CCDC94Q9BW85 323 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 VAMP4O75379 141 aa14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 MYD88Q99836 296 aa14.24□□□□□ -0.13
PCDHGA9-201ENST00000573521 FLT4P35916 1363 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 IFIT3O14879 490 aaKnown RBP14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 IL15P40933 162 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 PRPHP41219 470 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 SYKP43405 635 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 SPTY2D1Q68D10 685 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 CALML4Q96GE6 196 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 HCLS1P14317 486 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 MCMDC2Q4G0Z9 681 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 LINS1Q8NG48 757 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 CALM1P0DP23 149 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 CALM2P0DP24 149 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 CALM3P0DP25 149 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA9-201ENST00000573521 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
PCDHGA9-201ENST00000573521 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
PCDHGA9-201ENST00000573521 SKILP12757 684 aa14.22□□□□□ -0.13
PCDHGA9-201ENST00000573521 GNAT2P19087 354 aa14.22□□□□□ -0.13
PCDHGA9-201ENST00000573521 METAP2P50579 478 aaKnown RBP eCLIP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms