RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TIMM10P62072 90 aa16.99■□□□□ 0.31
TVP23A-207ENST00000573360 TFCP2Q12800 502 aa16.99■□□□□ 0.31
TVP23A-207ENST00000573360 BARGINQ6ZT62 677 aa16.99■□□□□ 0.31
TVP23A-207ENST00000573360 PUS3Q9BZE2 481 aaKnown RBP16.99■□□□□ 0.31
TVP23A-207ENST00000573360 BCL9O00512 1426 aa16.99■□□□□ 0.31
TVP23A-207ENST00000573360 AHDC1Q5TGY3 1603 aaPredicted RBP16.99■□□□□ 0.31
TVP23A-207ENST00000573360 SRP68Q9UHB9 627 aaKnown RBP16.99■□□□□ 0.31
TVP23A-207ENST00000573360 BCL9LQ86UU0 1499 aa16.99■□□□□ 0.31
TVP23A-207ENST00000573360 COL16A1Q07092 1604 aaPredicted RBP16.98■□□□□ 0.31
TVP23A-207ENST00000573360 LRRC24Q50LG9 513 aa16.98■□□□□ 0.31
TVP23A-207ENST00000573360 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
TVP23A-207ENST00000573360 LRRC37A3O60309 1634 aa16.98■□□□□ 0.31
TVP23A-207ENST00000573360 CWC27Q6UX04 472 aaKnown RBP16.97■□□□□ 0.31
TVP23A-207ENST00000573360 EAF2Q96CJ1 260 aaPredicted RBP16.97■□□□□ 0.31
TVP23A-207ENST00000573360 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
TVP23A-207ENST00000573360 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
TVP23A-207ENST00000573360 IBTKQ9P2D0 1353 aaPredicted RBP16.97■□□□□ 0.31
TVP23A-207ENST00000573360 SASH1O94885 1247 aa16.97■□□□□ 0.31
TVP23A-207ENST00000573360 SNRKQ9NRH2 765 aa16.97■□□□□ 0.31
TVP23A-207ENST00000573360 CNNM1Q9NRU3 951 aa16.97■□□□□ 0.31
TVP23A-207ENST00000573360 TNS2Q63HR2 1409 aa16.96■□□□□ 0.31
TVP23A-207ENST00000573360 LRP6O75581 1613 aa16.96■□□□□ 0.31
TVP23A-207ENST00000573360 CCDC191Q8NCU4 936 aa16.96■□□□□ 0.31
TVP23A-207ENST00000573360 LINC00116Q8NCU8 138 aa16.96■□□□□ 0.31
TVP23A-207ENST00000573360 SNAP23O00161 211 aa16.96■□□□□ 0.31
TVP23A-207ENST00000573360 GIGYF2Q6Y7W6 1299 aaKnown RBP16.96■□□□□ 0.31
TVP23A-207ENST00000573360 SMARCC1Q92922 1105 aaPredicted RBP16.96■□□□□ 0.31
TVP23A-207ENST00000573360 POLA2Q14181 598 aa16.95■□□□□ 0.3
TVP23A-207ENST00000573360 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
TVP23A-207ENST00000573360 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
TVP23A-207ENST00000573360 RAB11FIP3O75154 756 aa16.94■□□□□ 0.3
TVP23A-207ENST00000573360 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
TVP23A-207ENST00000573360 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
TVP23A-207ENST00000573360 NLRP10Q86W26 655 aa16.94■□□□□ 0.3
TVP23A-207ENST00000573360 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
TVP23A-207ENST00000573360 CRYBG1Q9Y4K1 1723 aa16.94■□□□□ 0.3
TVP23A-207ENST00000573360 KCNJ4P48050 445 aa16.94■□□□□ 0.3
TVP23A-207ENST00000573360 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
TVP23A-207ENST00000573360 ZPR1O75312 459 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 PTPN12Q05209 780 aaKnown RBP16.93■□□□□ 0.3
TVP23A-207ENST00000573360 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 DBNDD2Q9BQY9 259 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 GREM2Q9H772 168 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
TVP23A-207ENST00000573360 SLIT2O94813 1529 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 GOLGA6L3A6NEY3 463 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 L1TD1Q5T7N2 865 aaKnown RBP16.93■□□□□ 0.3
TVP23A-207ENST00000573360 AK7Q96M32 723 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
TVP23A-207ENST00000573360 IL6STP40189 918 aaPredicted RBP16.92■□□□□ 0.3
TVP23A-207ENST00000573360 SUSD4Q5VX71 490 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 KRT27Q7Z3Y8 459 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
TVP23A-207ENST00000573360 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 H7C1W4 665 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
TVP23A-207ENST00000573360 CHGBP05060 677 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 METTL24Q5JXM2 366 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 DDX46Q7L014 1031 aaKnown RBP16.91■□□□□ 0.3
TVP23A-207ENST00000573360 ERC1Q8IUD2 1116 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 ECHDC1Q9NTX5 307 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 CEP126Q9P2H0 1117 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 ITGA6P23229 1130 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 MCM4P33991 863 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 SEC31BQ9NQW1 1179 aa16.91■□□□□ 0.3
TVP23A-207ENST00000573360 IQSEC3Q9UPP2 1182 aaPredicted RBP16.91■□□□□ 0.3
TVP23A-207ENST00000573360 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
TVP23A-207ENST00000573360 RFC4P35249 363 aa16.9■□□□□ 0.3
TVP23A-207ENST00000573360 FOXO4P98177 505 aa16.9■□□□□ 0.3
TVP23A-207ENST00000573360 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
TVP23A-207ENST00000573360 ERC2O15083 957 aa16.9■□□□□ 0.3
TVP23A-207ENST00000573360 TAF5LO75529 589 aa16.9■□□□□ 0.3
TVP23A-207ENST00000573360 SLFNL1Q499Z3 407 aa16.9■□□□□ 0.3
TVP23A-207ENST00000573360 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
TVP23A-207ENST00000573360 UBN2Q6ZU65 1347 aa16.89■□□□□ 0.29
TVP23A-207ENST00000573360 DTNBO60941 627 aa16.89■□□□□ 0.29
TVP23A-207ENST00000573360 HSP90AB3PQ58FF7 597 aa16.89■□□□□ 0.29
TVP23A-207ENST00000573360 CNTROBQ8N137 903 aa16.89■□□□□ 0.29
TVP23A-207ENST00000573360 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
TVP23A-207ENST00000573360 MPHOSPH8Q99549 860 aa16.89■□□□□ 0.29
TVP23A-207ENST00000573360 LARP6Q9BRS8 491 aaKnown RBP16.89■□□□□ 0.29
TVP23A-207ENST00000573360 PARP4Q9UKK3 1724 aaKnown RBP16.89■□□□□ 0.29
TVP23A-207ENST00000573360 ISCA1Q9BUE6 129 aa16.89■□□□□ 0.29
TVP23A-207ENST00000573360 TRAK2O60296 914 aa16.89■□□□□ 0.29
TVP23A-207ENST00000573360 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
TVP23A-207ENST00000573360 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
TVP23A-207ENST00000573360 ABCC6O95255 1503 aa16.88■□□□□ 0.29
TVP23A-207ENST00000573360 C5P01031 1676 aa16.88■□□□□ 0.29
TVP23A-207ENST00000573360 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
TVP23A-207ENST00000573360 ANTXR1Q9H6X2 564 aa16.88■□□□□ 0.29
TVP23A-207ENST00000573360 DBNLQ9UJU6 430 aaKnown RBP16.88■□□□□ 0.29
TVP23A-207ENST00000573360 APBA3O96018 575 aa16.87■□□□□ 0.29
TVP23A-207ENST00000573360 TNNI3KQ59H18 835 aa16.87■□□□□ 0.29
TVP23A-207ENST00000573360 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
TVP23A-207ENST00000573360 FPGT-TNNI3KV9GXZ4 949 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms