RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 ABCC12Q96J65 1359 aa17.08■□□□□ 0.32
LINC01996-201ENST00000573270 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
LINC01996-201ENST00000573270 MS4A1P11836 297 aa17.08■□□□□ 0.32
LINC01996-201ENST00000573270 NFIXQ14938 502 aa17.08■□□□□ 0.32
LINC01996-201ENST00000573270 INTS3Q68E01 1043 aaKnown RBP17.08■□□□□ 0.32
LINC01996-201ENST00000573270 NLRP10Q86W26 655 aa17.08■□□□□ 0.32
LINC01996-201ENST00000573270 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
LINC01996-201ENST00000573270 ALDH1L1O75891 902 aa17.07■□□□□ 0.32
LINC01996-201ENST00000573270 ZBTB7AO95365 584 aa17.07■□□□□ 0.32
LINC01996-201ENST00000573270 DDR1Q08345 913 aa17.07■□□□□ 0.32
LINC01996-201ENST00000573270 CWC25Q9NXE8 425 aaPredicted RBP17.07■□□□□ 0.32
LINC01996-201ENST00000573270 NTSR2O95665 410 aa17.06■□□□□ 0.32
LINC01996-201ENST00000573270 PARP10Q53GL7 1025 aa17.06■□□□□ 0.32
LINC01996-201ENST00000573270 KIF13BQ9NQT8 1826 aa17.05■□□□□ 0.32
LINC01996-201ENST00000573270 POLRMTO00411 1230 aaKnown RBP17.05■□□□□ 0.32
LINC01996-201ENST00000573270 MMP10P09238 476 aa17.05■□□□□ 0.32
LINC01996-201ENST00000573270 GCKRQ14397 625 aa17.05■□□□□ 0.32
LINC01996-201ENST00000573270 SUSD4Q5VX71 490 aa17.05■□□□□ 0.32
LINC01996-201ENST00000573270 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
LINC01996-201ENST00000573270 MEIS3Q99687 375 aa17.05■□□□□ 0.32
LINC01996-201ENST00000573270 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
LINC01996-201ENST00000573270 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
LINC01996-201ENST00000573270 NLGN1Q8N2Q7 840 aa17.04■□□□□ 0.32
LINC01996-201ENST00000573270 JARID2Q92833 1246 aaPredicted RBP17.04■□□□□ 0.32
LINC01996-201ENST00000573270 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
LINC01996-201ENST00000573270 DLEC1Q9Y238 1755 aa17.04■□□□□ 0.32
LINC01996-201ENST00000573270 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
LINC01996-201ENST00000573270 GRM8O00222 908 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 TM4SF1P30408 202 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 TRIM28Q13263 835 aaKnown RBP17.03■□□□□ 0.32
LINC01996-201ENST00000573270 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 NUTM1Q86Y26 1132 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 MTFR1LQ9H019 292 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
LINC01996-201ENST00000573270 PPP1R42Q7Z4L9 355 aa17.02■□□□□ 0.32
LINC01996-201ENST00000573270 NBPF5PQ86XG9 351 aaPredicted RBP17.02■□□□□ 0.32
LINC01996-201ENST00000573270 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.32
LINC01996-201ENST00000573270 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
LINC01996-201ENST00000573270 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.32
LINC01996-201ENST00000573270 RIC1Q4ADV7 1423 aa17.02■□□□□ 0.31
LINC01996-201ENST00000573270 C10orf71Q711Q0 1435 aa17.02■□□□□ 0.31
LINC01996-201ENST00000573270 LRP5O75197 1615 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 PCCAP05165 728 aaPredicted RBP17.01■□□□□ 0.31
LINC01996-201ENST00000573270 NEFLP07196 543 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 NBPF7P0C2Y1 421 aaPredicted RBP17.01■□□□□ 0.31
LINC01996-201ENST00000573270 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 CNBD1Q8NA66 436 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 FAM89AQ96GI7 184 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
LINC01996-201ENST00000573270 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
LINC01996-201ENST00000573270 PARP3Q9Y6F1 533 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 COL4A1P02462 1669 aa17.01■□□□□ 0.31
LINC01996-201ENST00000573270 UTYO14607 1347 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 NPHP1O15259 732 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 SERPINB2P05120 415 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 UBTFL1P0CB47 393 aaPredicted RBP17■□□□□ 0.31
LINC01996-201ENST00000573270 CASP7P55210 303 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 ERFEQ4G0M1 354 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 PRR5LQ6MZQ0 368 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 SYNE4Q8N205 404 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
LINC01996-201ENST00000573270 SUCLG2Q96I99 432 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 NYXQ9GZU5 481 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 USP44Q9H0E7 712 aa17■□□□□ 0.31
LINC01996-201ENST00000573270 CDHR2Q9BYE9 1310 aa16.99■□□□□ 0.31
LINC01996-201ENST00000573270 H7C1W4 665 aa16.98■□□□□ 0.31
LINC01996-201ENST00000573270 ZBTB7BO15156 539 aaPredicted RBP16.98■□□□□ 0.31
LINC01996-201ENST00000573270 GNAI3P08754 354 aa16.98■□□□□ 0.31
LINC01996-201ENST00000573270 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
LINC01996-201ENST00000573270 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
LINC01996-201ENST00000573270 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
LINC01996-201ENST00000573270 ST5P78524 1137 aa16.97■□□□□ 0.31
LINC01996-201ENST00000573270 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
LINC01996-201ENST00000573270 A0A1B0GUL6 1792 aa16.97■□□□□ 0.31
LINC01996-201ENST00000573270 TAF1P21675 1872 aa16.97■□□□□ 0.31
LINC01996-201ENST00000573270 POLD1P28340 1107 aa16.96■□□□□ 0.31
LINC01996-201ENST00000573270 EPHA10Q5JZY3 1008 aa16.96■□□□□ 0.31
LINC01996-201ENST00000573270 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
LINC01996-201ENST00000573270 BICC1Q9H694 974 aaKnown RBP16.96■□□□□ 0.31
LINC01996-201ENST00000573270 GNAI2P04899 355 aa16.95■□□□□ 0.3
LINC01996-201ENST00000573270 PTGER2P43116 358 aa16.95■□□□□ 0.3
LINC01996-201ENST00000573270 TPTE2Q6XPS3 522 aa16.95■□□□□ 0.3
LINC01996-201ENST00000573270 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
LINC01996-201ENST00000573270 KAZALD1Q96I82 304 aa16.95■□□□□ 0.3
LINC01996-201ENST00000573270 ZBTB40Q9NUA8 1239 aa16.95■□□□□ 0.3
LINC01996-201ENST00000573270 CTSWP56202 376 aa16.94■□□□□ 0.3
LINC01996-201ENST00000573270 ANKRD44Q8N8A2 993 aa16.94■□□□□ 0.3
LINC01996-201ENST00000573270 BRCA1P38398 1863 aaKnown RBP16.94■□□□□ 0.3
LINC01996-201ENST00000573270 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
LINC01996-201ENST00000573270 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
LINC01996-201ENST00000573270 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
LINC01996-201ENST00000573270 SRCAPQ6ZRS2 3230 aa16.92■□□□□ 0.3
LINC01996-201ENST00000573270 PDE8AO60658 829 aa16.92■□□□□ 0.3
LINC01996-201ENST00000573270 FOXO4P98177 505 aa16.92■□□□□ 0.3
LINC01996-201ENST00000573270 CCDC85AQ96PX6 553 aaPredicted RBP16.92■□□□□ 0.3
LINC01996-201ENST00000573270 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms