RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CSB-PGBD3P0DP91 1061 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 ZKSCAN1P17029 563 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-212ENST00000573126 GJB2P29033 226 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 GCKRQ14397 625 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 VPS53Q5VIR6 699 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 ZSWIM6Q9HCJ5 1215 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 USP16Q9Y5T5 823 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 PHKG2P15735 406 aa13.46□□□□□ -0.25
RPAIN-212ENST00000573126 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
RPAIN-212ENST00000573126 NECAB1Q8N987 351 aa13.46□□□□□ -0.25
RPAIN-212ENST00000573126 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.25
RPAIN-212ENST00000573126 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
RPAIN-212ENST00000573126 C1orf167Q5SNV9 1468 aa13.46□□□□□ -0.25
RPAIN-212ENST00000573126 F13A1P00488 732 aa13.46□□□□□ -0.26
RPAIN-212ENST00000573126 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-212ENST00000573126 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-212ENST00000573126 TATP17735 454 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-212ENST00000573126 CHRNA2Q15822 529 aa13.45□□□□□ -0.26
RPAIN-212ENST00000573126 ME3Q16798 604 aa13.45□□□□□ -0.26
RPAIN-212ENST00000573126 C19orf44Q9H6X5 657 aa13.45□□□□□ -0.26
RPAIN-212ENST00000573126 ST3GAL1Q11201 340 aa13.45□□□□□ -0.26
RPAIN-212ENST00000573126 MAP4K1Q92918 833 aa13.45□□□□□ -0.26
RPAIN-212ENST00000573126 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
RPAIN-212ENST00000573126 VPS37CA5D8V6 355 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-212ENST00000573126 ANKRD13DQ6ZTN6 518 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 METTL22Q9BUU2 404 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-212ENST00000573126 TM6SF1Q9BZW5 370 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 NDUFB9Q9Y6M9 179 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 TCHHQ07283 1943 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 PHF14O94880 888 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 ZNF589Q86UQ0 364 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-212ENST00000573126 TTC5Q8N0Z6 440 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.44□□□□□ -0.26
RPAIN-212ENST00000573126 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
RPAIN-212ENST00000573126 MEGF6O75095 1541 aa13.44□□□□□ -0.26
RPAIN-212ENST00000573126 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 SLC27A2O14975 620 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 PTCD1O75127 700 aaKnown RBP13.43□□□□□ -0.26
RPAIN-212ENST00000573126 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
RPAIN-212ENST00000573126 HS1BP3Q53T59 392 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 KCNB2Q92953 911 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 MTMR6Q9Y217 621 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 HIP1O00291 1037 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 CYP27B1O15528 508 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
RPAIN-212ENST00000573126 SH2B1Q9NRF2 756 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-212ENST00000573126 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-212ENST00000573126 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
RPAIN-212ENST00000573126 CHGBP05060 677 aa13.42□□□□□ -0.26
RPAIN-212ENST00000573126 SNRPA1P09661 255 aaKnown RBP13.42□□□□□ -0.26
RPAIN-212ENST00000573126 UBE2HP62256 183 aa13.42□□□□□ -0.26
RPAIN-212ENST00000573126 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
RPAIN-212ENST00000573126 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-212ENST00000573126 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
RPAIN-212ENST00000573126 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
RPAIN-212ENST00000573126 SIPA1L3O60292 1781 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-212ENST00000573126 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
RPAIN-212ENST00000573126 CCDC9Q9Y3X0 531 aaKnown RBP13.41□□□□□ -0.26
RPAIN-212ENST00000573126 ATF3P18847 181 aa13.41□□□□□ -0.26
RPAIN-212ENST00000573126 PTPN12Q05209 780 aaKnown RBP13.41□□□□□ -0.26
RPAIN-212ENST00000573126 TFCP2Q12800 502 aa13.41□□□□□ -0.26
RPAIN-212ENST00000573126 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
RPAIN-212ENST00000573126 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
RPAIN-212ENST00000573126 MPNDQ8N594 471 aa13.41□□□□□ -0.26
RPAIN-212ENST00000573126 A0A087WZG4 1122 aa13.4□□□□□ -0.26
RPAIN-212ENST00000573126 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-212ENST00000573126 PSMA5P28066 241 aa13.4□□□□□ -0.26
RPAIN-212ENST00000573126 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
RPAIN-212ENST00000573126 DCAF5Q96JK2 942 aa13.4□□□□□ -0.26
RPAIN-212ENST00000573126 ZKSCAN5Q9Y2L8 839 aa13.4□□□□□ -0.26
RPAIN-212ENST00000573126 C5P01031 1676 aa13.4□□□□□ -0.26
RPAIN-212ENST00000573126 MED23Q9ULK4 1368 aa13.4□□□□□ -0.26
RPAIN-212ENST00000573126 STK3Q13188 491 aa13.4□□□□□ -0.27
RPAIN-212ENST00000573126 TNNI3KQ59H18 835 aa13.4□□□□□ -0.27
RPAIN-212ENST00000573126 FAM173BQ6P4H8 233 aa13.4□□□□□ -0.27
RPAIN-212ENST00000573126 FMNL2Q96PY5 1086 aa13.4□□□□□ -0.27
RPAIN-212ENST00000573126 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.27
RPAIN-212ENST00000573126 COPRSQ9NQ92 184 aa13.4□□□□□ -0.27
RPAIN-212ENST00000573126 FPGT-TNNI3KV9GXZ4 949 aa13.4□□□□□ -0.27
RPAIN-212ENST00000573126 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 OFD1O75665 1012 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 PTMAP06454 111 aaKnown RBP13.39□□□□□ -0.27
RPAIN-212ENST00000573126 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-212ENST00000573126 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
RPAIN-212ENST00000573126 CDC37L1Q7L3B6 337 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 SNRKQ9NRH2 765 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 USP25Q9UHP3 1055 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 CABP4P57796 275 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 GIMAP6Q6P9H5 292 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 DBNDD2Q9BQY9 259 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.272e-8■□□□□ 9.4
RPAIN-212ENST00000573126 CCDC39Q9UFE4 941 aa13.39□□□□□ -0.27
RPAIN-212ENST00000573126 TAF5LO75529 589 aa13.38□□□□□ -0.27
RPAIN-212ENST00000573126 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms