RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 TTC14Q96N46 770 aa19.67■□□□□ 0.74
POLR2A-201ENST00000572844 CCDC8Q9H0W5 538 aaPredicted RBP19.67■□□□□ 0.74
POLR2A-201ENST00000572844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.67■□□□□ 0.74
POLR2A-201ENST00000572844 PIP4K2AP48426 406 aaPredicted RBP19.67■□□□□ 0.74
POLR2A-201ENST00000572844 UBE3BQ7Z3V4 1068 aa19.67■□□□□ 0.74
POLR2A-201ENST00000572844 TM6SF1Q9BZW5 370 aa19.67■□□□□ 0.74
POLR2A-201ENST00000572844 XRCC6P12956 609 aaKnown RBP eCLIP19.66■□□□□ 0.74
POLR2A-201ENST00000572844 UPF3BQ9BZI7 483 aaKnown RBP19.66■□□□□ 0.74
POLR2A-201ENST00000572844 RFX7Q2KHR2 1363 aa19.66■□□□□ 0.74
POLR2A-201ENST00000572844 SIL1Q9H173 461 aa19.66■□□□□ 0.74
POLR2A-201ENST00000572844 BRD1O95696 1058 aa19.65■□□□□ 0.74
POLR2A-201ENST00000572844 EVA1CP58658 441 aa19.65■□□□□ 0.74
POLR2A-201ENST00000572844 ATP5JP18859 108 aa19.64■□□□□ 0.74
POLR2A-201ENST00000572844 MCTP1Q6DN14 999 aa19.64■□□□□ 0.74
POLR2A-201ENST00000572844 RASEFQ8IZ41 740 aa19.64■□□□□ 0.74
POLR2A-201ENST00000572844 KLHDC4Q8TBB5 520 aa19.64■□□□□ 0.74
POLR2A-201ENST00000572844 LMBRD1Q9NUN5 540 aa19.64■□□□□ 0.74
POLR2A-201ENST00000572844 TLR7Q9NYK1 1049 aaKnown RBP19.64■□□□□ 0.74
POLR2A-201ENST00000572844 CCDC171Q6TFL3 1326 aa19.64■□□□□ 0.73
POLR2A-201ENST00000572844 COL14A1Q05707 1796 aaKnown RBP19.64■□□□□ 0.73
POLR2A-201ENST00000572844 ITGB4P16144 1822 aa19.64■□□□□ 0.73
POLR2A-201ENST00000572844 ATP5J2-PTCD1G3V325 749 aa19.64■□□□□ 0.73
POLR2A-201ENST00000572844 PTCD1O75127 700 aaKnown RBP19.64■□□□□ 0.73
POLR2A-201ENST00000572844 TNNI3KQ59H18 835 aa19.64■□□□□ 0.73
POLR2A-201ENST00000572844 CWC25Q9NXE8 425 aaPredicted RBP19.64■□□□□ 0.73
POLR2A-201ENST00000572844 FPGT-TNNI3KV9GXZ4 949 aa19.64■□□□□ 0.73
POLR2A-201ENST00000572844 PTH1RQ03431 593 aa19.63■□□□□ 0.73
POLR2A-201ENST00000572844 NECTIN1Q15223 517 aa19.63■□□□□ 0.73
POLR2A-201ENST00000572844 CCDC191Q8NCU4 936 aa19.63■□□□□ 0.73
POLR2A-201ENST00000572844 DDX49Q9Y6V7 483 aaKnown RBP19.63■□□□□ 0.73
POLR2A-201ENST00000572844 FOXO4P98177 505 aa19.63■□□□□ 0.73
POLR2A-201ENST00000572844 MAP4K1Q92918 833 aa19.63■□□□□ 0.73
POLR2A-201ENST00000572844 JCADQ9P266 1359 aa19.62■□□□□ 0.73
POLR2A-201ENST00000572844 PLCH1Q4KWH8 1693 aa19.62■□□□□ 0.73
POLR2A-201ENST00000572844 DDX54Q8TDD1 881 aaKnown RBP19.62■□□□□ 0.73
POLR2A-201ENST00000572844 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
POLR2A-201ENST00000572844 LIMCH1Q9UPQ0 1083 aa19.62■□□□□ 0.73
POLR2A-201ENST00000572844 MED23Q9ULK4 1368 aa19.62■□□□□ 0.73
POLR2A-201ENST00000572844 NMIQ13287 307 aaPredicted RBP19.61■□□□□ 0.73
POLR2A-201ENST00000572844 VPS53Q5VIR6 699 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 TTLL7Q6ZT98 887 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 TICAM2Q86XR7 235 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
POLR2A-201ENST00000572844 BOLA2Q9H3K6 86 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 GRPEL1Q9HAV7 217 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 GPR108Q9NPR9 543 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 LRP6O75581 1613 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 A1BGP04217 495 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 TFCP2Q12800 502 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 FSD1Q9BTV5 496 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
POLR2A-201ENST00000572844 COL22A1Q8NFW1 1626 aaPredicted RBP19.6■□□□□ 0.73
POLR2A-201ENST00000572844 AK2P54819 239 aa19.6■□□□□ 0.73
POLR2A-201ENST00000572844 LMBR1LQ6UX01 489 aa19.6■□□□□ 0.73
POLR2A-201ENST00000572844 JARID2Q92833 1246 aaPredicted RBP19.6■□□□□ 0.73
POLR2A-201ENST00000572844 ATG3Q9NT62 314 aa19.6■□□□□ 0.73
POLR2A-201ENST00000572844 DBNLQ9UJU6 430 aaKnown RBP19.6■□□□□ 0.73
POLR2A-201ENST00000572844 ZKSCAN1P17029 563 aaPredicted RBP19.6■□□□□ 0.73
POLR2A-201ENST00000572844 ZSCAN31Q96LW9 406 aaPredicted RBP19.6■□□□□ 0.73
POLR2A-201ENST00000572844 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
POLR2A-201ENST00000572844 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
POLR2A-201ENST00000572844 FAM227BQ96M60 508 aa19.59■□□□□ 0.73
POLR2A-201ENST00000572844 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
POLR2A-201ENST00000572844 WNK3Q9BYP7 1800 aa19.59■□□□□ 0.73
POLR2A-201ENST00000572844 WDR33Q9C0J8 1336 aaKnown RBP19.58■□□□□ 0.73
POLR2A-201ENST00000572844 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.73
POLR2A-201ENST00000572844 RUFY3Q7L099 469 aa19.58■□□□□ 0.73
POLR2A-201ENST00000572844 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.58■□□□□ 0.73
POLR2A-201ENST00000572844 RBM8AQ9Y5S9 174 aaKnown RBP19.58■□□□□ 0.73
POLR2A-201ENST00000572844 ZNF445P59923 1031 aa19.58■□□□□ 0.72
POLR2A-201ENST00000572844 TRIM28Q13263 835 aaKnown RBP19.58■□□□□ 0.72
POLR2A-201ENST00000572844 CREB3L3Q68CJ9 461 aa19.58■□□□□ 0.72
POLR2A-201ENST00000572844 NOL8Q76FK4 1167 aaKnown RBP19.58■□□□□ 0.72
POLR2A-201ENST00000572844 ISCA1Q9BUE6 129 aa19.58■□□□□ 0.72
POLR2A-201ENST00000572844 CYP46A1Q9Y6A2 500 aa19.58■□□□□ 0.72
POLR2A-201ENST00000572844 SPEF2Q9C093 1822 aa19.58■□□□□ 0.72
POLR2A-201ENST00000572844 RPAP1Q9BWH6 1393 aaPredicted RBP19.57■□□□□ 0.72
POLR2A-201ENST00000572844 HAUS7Q99871 368 aa19.57■□□□□ 0.72
POLR2A-201ENST00000572844 SH2B1Q9NRF2 756 aaPredicted RBP19.57■□□□□ 0.72
POLR2A-201ENST00000572844 A0A0D9SFI3 127 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 PSMA5P28066 241 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 TSGA10IPQ3SY00 556 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 RNF20Q5VTR2 975 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 JAKMIP1Q96N16 626 aaKnown RBP19.56■□□□□ 0.72
POLR2A-201ENST00000572844 ALDH8A1Q9H2A2 487 aaPredicted RBP19.56■□□□□ 0.72
POLR2A-201ENST00000572844 PDRG1Q9NUG6 133 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 AHDC1Q5TGY3 1603 aaPredicted RBP19.56■□□□□ 0.72
POLR2A-201ENST00000572844 PRPF40AO75400 957 aaKnown RBP19.56■□□□□ 0.72
POLR2A-201ENST00000572844 CIAO1O76071 339 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 IL15P40933 162 aaPredicted RBP19.56■□□□□ 0.72
POLR2A-201ENST00000572844 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 GAS2L3Q86XJ1 694 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 HMG20BQ9P0W2 317 aa19.56■□□□□ 0.72
POLR2A-201ENST00000572844 SLC27A2O14975 620 aa19.55■□□□□ 0.72
POLR2A-201ENST00000572844 TCIRG1Q13488 830 aa19.55■□□□□ 0.72
POLR2A-201ENST00000572844 ADCK5Q3MIX3 580 aa19.55■□□□□ 0.72
POLR2A-201ENST00000572844 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
POLR2A-201ENST00000572844 ZBTB3Q9H5J0 574 aa19.55■□□□□ 0.72
POLR2A-201ENST00000572844 FBXO3Q9UK99 471 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms