RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 SOGA3Q5TF21 947 aa17.85■□□□□ 0.45
RPAIN-211ENST00000572174 FER1L6Q2WGJ9 1857 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 DDX60Q8IY21 1712 aaKnown RBP17.84■□□□□ 0.45
RPAIN-211ENST00000572174 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
RPAIN-211ENST00000572174 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 KLRG2A4D1S0 409 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-211ENST00000572174 NTSR2O95665 410 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 SRGNP10124 158 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
RPAIN-211ENST00000572174 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 NLRP10Q86W26 655 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.45
RPAIN-211ENST00000572174 PHAXQ9H814 394 aaKnown RBP17.84■□□□□ 0.45
RPAIN-211ENST00000572174 SLX4Q8IY92 1834 aa17.84■□□□□ 0.45
RPAIN-211ENST00000572174 DICER1Q9UPY3 1922 aaKnown RBP17.83■□□□□ 0.44
RPAIN-211ENST00000572174 ALDH1B1P30837 517 aa17.83■□□□□ 0.44
RPAIN-211ENST00000572174 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
RPAIN-211ENST00000572174 KSR2Q6VAB6 950 aa17.83■□□□□ 0.44
RPAIN-211ENST00000572174 SPINK5Q9NQ38 1064 aaPredicted RBP17.83■□□□□ 0.44
RPAIN-211ENST00000572174 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
RPAIN-211ENST00000572174 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
RPAIN-211ENST00000572174 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
RPAIN-211ENST00000572174 NLRP3Q96P20 1036 aa17.82■□□□□ 0.44
RPAIN-211ENST00000572174 ISCA1Q9BUE6 129 aa17.82■□□□□ 0.44
RPAIN-211ENST00000572174 WWC3Q9ULE0 1092 aa17.82■□□□□ 0.44
RPAIN-211ENST00000572174 ABCC12Q96J65 1359 aa17.81■□□□□ 0.44
RPAIN-211ENST00000572174 FLIIQ13045 1269 aa17.81■□□□□ 0.44
RPAIN-211ENST00000572174 FKBP5Q13451 457 aaPredicted RBP17.81■□□□□ 0.44
RPAIN-211ENST00000572174 CRY2Q49AN0 593 aa17.81■□□□□ 0.44
RPAIN-211ENST00000572174 ERFEQ4G0M1 354 aa17.81■□□□□ 0.44
RPAIN-211ENST00000572174 NUTM1Q86Y26 1132 aa17.81■□□□□ 0.44
RPAIN-211ENST00000572174 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
RPAIN-211ENST00000572174 METTL22Q9BUU2 404 aaPredicted RBP17.81■□□□□ 0.44
RPAIN-211ENST00000572174 SLC10A5Q5PT55 438 aa17.8■□□□□ 0.44
RPAIN-211ENST00000572174 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
RPAIN-211ENST00000572174 MAP3K2Q9Y2U5 619 aa17.8■□□□□ 0.44
RPAIN-211ENST00000572174 PI4KAP2A4QPH2 592 aa17.79■□□□□ 0.44
RPAIN-211ENST00000572174 HNRNPUQ00839 825 aaKnown RBP eCLIP17.79■□□□□ 0.44
RPAIN-211ENST00000572174 PI4KAP1Q8N8J0 262 aa17.79■□□□□ 0.44
RPAIN-211ENST00000572174 RBM17Q96I25 401 aaKnown RBP17.79■□□□□ 0.44
RPAIN-211ENST00000572174 MYD88Q99836 296 aa17.79■□□□□ 0.44
RPAIN-211ENST00000572174 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-211ENST00000572174 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
RPAIN-211ENST00000572174 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
RPAIN-211ENST00000572174 PRPF40BQ6NWY9 871 aaKnown RBP17.78■□□□□ 0.44
RPAIN-211ENST00000572174 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
RPAIN-211ENST00000572174 TMX4Q9H1E5 349 aaPredicted RBP17.78■□□□□ 0.44
RPAIN-211ENST00000572174 ADCY9O60503 1353 aa17.78■□□□□ 0.44
RPAIN-211ENST00000572174 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.44
RPAIN-211ENST00000572174 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
RPAIN-211ENST00000572174 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
RPAIN-211ENST00000572174 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.44
RPAIN-211ENST00000572174 UTRNP46939 3433 aa17.77■□□□□ 0.43
RPAIN-211ENST00000572174 TCERG1O14776 1098 aaKnown RBP17.76■□□□□ 0.43
RPAIN-211ENST00000572174 PCCAP05165 728 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-211ENST00000572174 HOXA10P31260 410 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-211ENST00000572174 CC2D2BQ6DHV5 1058 aa17.76■□□□□ 0.43
RPAIN-211ENST00000572174 CRAMP1Q96RY5 1269 aa17.76■□□□□ 0.43
RPAIN-211ENST00000572174 PTPRCP08575 1304 aa17.75■□□□□ 0.43
RPAIN-211ENST00000572174 ZBED9Q6R2W3 1325 aa17.75■□□□□ 0.43
RPAIN-211ENST00000572174 ZC3H4Q9UPT8 1303 aaKnown RBP17.75■□□□□ 0.43
RPAIN-211ENST00000572174 CCDC93Q567U6 631 aa17.75■□□□□ 0.43
RPAIN-211ENST00000572174 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
RPAIN-211ENST00000572174 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
RPAIN-211ENST00000572174 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
RPAIN-211ENST00000572174 LINS1Q8NG48 757 aa17.74■□□□□ 0.43
RPAIN-211ENST00000572174 CDCA7LQ96GN5 454 aa17.74■□□□□ 0.43
RPAIN-211ENST00000572174 CDHR2Q9BYE9 1310 aa17.73■□□□□ 0.43
RPAIN-211ENST00000572174 LTBP3Q9NS15 1303 aa17.73■□□□□ 0.43
RPAIN-211ENST00000572174 IRS4O14654 1257 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-211ENST00000572174 C21orf2O43822 256 aa17.73■□□□□ 0.43
RPAIN-211ENST00000572174 G2E3Q7L622 706 aa17.73■□□□□ 0.43
RPAIN-211ENST00000572174 LRRC37AA6NMS7 1700 aa17.72■□□□□ 0.43
RPAIN-211ENST00000572174 NEURL1BA8MQ27 555 aa17.72■□□□□ 0.43
RPAIN-211ENST00000572174 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
RPAIN-211ENST00000572174 LMNB1P20700 586 aa17.72■□□□□ 0.43
RPAIN-211ENST00000572174 FAM89AQ96GI7 184 aa17.72■□□□□ 0.43
RPAIN-211ENST00000572174 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
RPAIN-211ENST00000572174 TAF1P21675 1872 aa17.71■□□□□ 0.43
RPAIN-211ENST00000572174 SF3B3Q15393 1217 aaKnown RBP17.71■□□□□ 0.43
RPAIN-211ENST00000572174 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
RPAIN-211ENST00000572174 KIF16BQ96L93 1317 aa17.71■□□□□ 0.42
RPAIN-211ENST00000572174 PPEF1O14829 653 aaPredicted RBP17.7■□□□□ 0.42
RPAIN-211ENST00000572174 PDE8AO60658 829 aa17.7■□□□□ 0.42
RPAIN-211ENST00000572174 BBOX1O75936 387 aa17.7■□□□□ 0.42
RPAIN-211ENST00000572174 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
RPAIN-211ENST00000572174 ALDH1L1O75891 902 aa17.69■□□□□ 0.42
RPAIN-211ENST00000572174 IGKV5-2P06315 115 aa17.69■□□□□ 0.42
RPAIN-211ENST00000572174 GCKRQ14397 625 aa17.69■□□□□ 0.42
RPAIN-211ENST00000572174 MRPL50Q8N5N7 158 aaKnown RBP17.69■□□□□ 0.42
RPAIN-211ENST00000572174 RNF181Q9P0P0 153 aa17.69■□□□□ 0.42
RPAIN-211ENST00000572174 SPEF2Q9C093 1822 aa17.68■□□□□ 0.42
RPAIN-211ENST00000572174 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
RPAIN-211ENST00000572174 GRAPQ13588 217 aa17.68■□□□□ 0.42
RPAIN-211ENST00000572174 CWF19L2Q2TBE0 894 aaKnown RBP17.68■□□□□ 0.42
RPAIN-211ENST00000572174 C9orf131Q5VYM1 1079 aa17.68■□□□□ 0.42
RPAIN-211ENST00000572174 GRAPLQ8TC17 118 aaPredicted RBP17.68■□□□□ 0.42
RPAIN-211ENST00000572174 C7orf43Q8WVR3 580 aa17.68■□□□□ 0.42
RPAIN-211ENST00000572174 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms