RNA–Protein interactions for RNA: ENST00000572152.5

ABR-216, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-216ENST00000572152 CCDC27Q2M243 656 aa12.96□□□□□ -0.33
ABR-216ENST00000572152 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
ABR-216ENST00000572152 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
ABR-216ENST00000572152 HYPKQ9NX55 129 aa12.96□□□□□ -0.33
ABR-216ENST00000572152 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 GLTPD2A6NH11 291 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 TOMM70O94826 608 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 HOXA10P31260 410 aaPredicted RBP12.95□□□□□ -0.34
ABR-216ENST00000572152 SLC10A5Q5PT55 438 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 OLFM4Q6UX06 510 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 C8orf58Q8NAV2 365 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 RRAGCQ9HB90 399 aa12.95□□□□□ -0.34
ABR-216ENST00000572152 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
ABR-216ENST00000572152 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
ABR-216ENST00000572152 RBM17Q96I25 401 aaKnown RBP12.94□□□□□ -0.34
ABR-216ENST00000572152 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
ABR-216ENST00000572152 FKBP4Q02790 459 aaKnown RBP eCLIP12.93□□□□□ -0.34
ABR-216ENST00000572152 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
ABR-216ENST00000572152 C16orf71Q8IYS4 520 aaPredicted RBP12.93□□□□□ -0.34
ABR-216ENST00000572152 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
ABR-216ENST00000572152 TSR2Q969E8 191 aaKnown RBP12.93□□□□□ -0.34
ABR-216ENST00000572152 CRAMP1Q96RY5 1269 aa12.93□□□□□ -0.34
ABR-216ENST00000572152 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
ABR-216ENST00000572152 CACNA1SQ13698 1873 aa12.93□□□□□ -0.34
ABR-216ENST00000572152 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
ABR-216ENST00000572152 HSPA6P17066 643 aa12.92□□□□□ -0.34
ABR-216ENST00000572152 CC2D2BQ6DHV5 1058 aa12.92□□□□□ -0.34
ABR-216ENST00000572152 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
ABR-216ENST00000572152 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
ABR-216ENST00000572152 TSPYL6Q8N831 410 aa12.92□□□□□ -0.34
ABR-216ENST00000572152 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
ABR-216ENST00000572152 ZNF428Q96B54 188 aa12.92□□□□□ -0.34
ABR-216ENST00000572152 ISCA1Q9BUE6 129 aa12.92□□□□□ -0.34
ABR-216ENST00000572152 PHAXQ9H814 394 aaKnown RBP12.92□□□□□ -0.34
ABR-216ENST00000572152 IL16Q14005 1332 aa12.91□□□□□ -0.34
ABR-216ENST00000572152 SH3TC1Q8TE82 1336 aa12.91□□□□□ -0.34
ABR-216ENST00000572152 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
ABR-216ENST00000572152 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
ABR-216ENST00000572152 VEGFAP15692 232 aaPredicted RBP12.91□□□□□ -0.34
ABR-216ENST00000572152 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
ABR-216ENST00000572152 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
ABR-216ENST00000572152 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
ABR-216ENST00000572152 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
ABR-216ENST00000572152 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
ABR-216ENST00000572152 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
ABR-216ENST00000572152 GOLGA2Q08379 1002 aa12.9□□□□□ -0.34
ABR-216ENST00000572152 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
ABR-216ENST00000572152 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
ABR-216ENST00000572152 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
ABR-216ENST00000572152 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
ABR-216ENST00000572152 POTECB2RU33 542 aa12.89□□□□□ -0.35
ABR-216ENST00000572152 TCERG1O14776 1098 aaKnown RBP12.89□□□□□ -0.35
ABR-216ENST00000572152 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
ABR-216ENST00000572152 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
ABR-216ENST00000572152 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
ABR-216ENST00000572152 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
ABR-216ENST00000572152 PSMD1Q99460 953 aa12.89□□□□□ -0.35
ABR-216ENST00000572152 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
ABR-216ENST00000572152 DDNO94850 711 aaPredicted RBP12.88□□□□□ -0.35
ABR-216ENST00000572152 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
ABR-216ENST00000572152 FSTL1Q12841 308 aa12.88□□□□□ -0.35
ABR-216ENST00000572152 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
ABR-216ENST00000572152 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
ABR-216ENST00000572152 ATP6V0A2Q9Y487 856 aa12.88□□□□□ -0.35
ABR-216ENST00000572152 ABCC4O15439 1325 aa12.88□□□□□ -0.35
ABR-216ENST00000572152 BBOX1O75936 387 aa12.87□□□□□ -0.35
ABR-216ENST00000572152 DDX58O95786 925 aaKnown RBP12.87□□□□□ -0.35
ABR-216ENST00000572152 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
ABR-216ENST00000572152 MYD88Q99836 296 aa12.87□□□□□ -0.35
ABR-216ENST00000572152 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
ABR-216ENST00000572152 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
ABR-216ENST00000572152 WDR90Q96KV7 1748 aa12.86□□□□□ -0.35
ABR-216ENST00000572152 APLP1P51693 650 aa12.86□□□□□ -0.35
ABR-216ENST00000572152 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
ABR-216ENST00000572152 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
ABR-216ENST00000572152 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
ABR-216ENST00000572152 JDP2Q8WYK2 163 aa12.86□□□□□ -0.35
ABR-216ENST00000572152 METTL22Q9BUU2 404 aaPredicted RBP12.86□□□□□ -0.35
ABR-216ENST00000572152 TMX4Q9H1E5 349 aaPredicted RBP12.86□□□□□ -0.35
ABR-216ENST00000572152 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
ABR-216ENST00000572152 FZD9O00144 591 aa12.85□□□□□ -0.35
ABR-216ENST00000572152 IRS4O14654 1257 aaPredicted RBP12.85□□□□□ -0.35
ABR-216ENST00000572152 GRAPQ13588 217 aa12.85□□□□□ -0.35
ABR-216ENST00000572152 KSR2Q6VAB6 950 aa12.85□□□□□ -0.35
ABR-216ENST00000572152 SP8Q8IXZ3 490 aa12.85□□□□□ -0.35
ABR-216ENST00000572152 ZBTB38Q8NAP3 1195 aaPredicted RBP12.85□□□□□ -0.35
ABR-216ENST00000572152 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
ABR-216ENST00000572152 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
ABR-216ENST00000572152 MAP3K2Q9Y2U5 619 aa12.85□□□□□ -0.35
ABR-216ENST00000572152 LAMB2P55268 1798 aa12.84□□□□□ -0.35
ABR-216ENST00000572152 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
ABR-216ENST00000572152 LARGE2Q8N3Y3 721 aa12.84□□□□□ -0.35
ABR-216ENST00000572152 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
ABR-216ENST00000572152 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
ABR-216ENST00000572152 PI4KAP2A4QPH2 592 aa12.83□□□□□ -0.36
ABR-216ENST00000572152 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms